Gene: Sopen06g035770

General Information

Structural Information

  • Species Solanum pennellii
  • Gene Identifier Sopen06g035770
  • Transcript Identifier Sopen06g035770.1
  • Gene Type Coding gene
  • Location Spenn-ch06 : 60557004-60559799 : positive

Gene Family Information

  • ID HOM05D001881
  • #Genes/#Species 350/95
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Sopen06g035770.1

Descriptions

  • Description oxidoreductase, 2OG-Fe(II) oxygenase family protein | FUNCTIONS IN: oxidoreductase activity | INVOLVED IN: response to karrikin | EXPRESSED IN: 22 plant structures | EXPRESSED DURING: 13 growth stages | CONTAINS InterPro DOMAIN/s: Oxoglutarate/iron-dependent oxygenase | BEST Arabidopsis thaliana protein match is: oxidoreductase, 2OG-Fe(II) oxygenase family protein
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006402
IEA
InterPromRNA catabolic process
GO:0080167
ISO
PLAZA Integrative Orthologyresponse to karrikin AT4G02940
GO:0010228
ISO
PLAZA Integrative Orthologyvegetative to reproductive phase transition of meristem AT4G02940
GO:0035513
ISO
PLAZA Integrative Orthologyoxidative RNA demethylation AT4G02940

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003729
IEA
InterPromRNA binding
GO:0032451
IEA
InterProdemethylase activity
GO:1990931
ISO
PLAZA Integrative OrthologyRNA N6-methyladenosine dioxygenase activity AT4G02940

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR044842 RNA demethylase ALKBH9B/ALKBH10B-like
IPR037151 Alpha-ketoglutarate-dependent dioxygenase AlkB-like superfamily
Mapman id Description
16.5.8.3.2 RNA processing.RNA modification.mRNA methylation.N6-methyladenosine demethylation.demethylase (ALKBH10)