Gene: ClCG07G006830

General Information

Structural Information

  • Species Citrullus lanatus
  • Gene Identifier ClCG07G006830
  • Transcript Identifier ClCG07G006830.1
  • Gene Type Coding gene
  • Location CG_Chr07 : 13988018-13999693 : positive

Gene Family Information

  • ID HOM05D001881
  • #Genes/#Species 350/95
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid ClCG07G006830.1
  • name genemark-CGscf_0040-processed-gene-2.189
  • name genemark-CGscf_0040-processed-gene-2.189-mRNA-1

Descriptions

  • Description Hydroxyproline-rich glycoprotein
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006402
IEA
InterPromRNA catabolic process
GO:0080167
ISO
PLAZA Integrative Orthologyresponse to karrikin AT4G02940
GO:0010228
ISO
PLAZA Integrative Orthologyvegetative to reproductive phase transition of meristem AT4G02940
GO:0035513
ISO
PLAZA Integrative Orthologyoxidative RNA demethylation AT4G02940

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003729
IEA
InterPromRNA binding
GO:0032451
IEA
InterProdemethylase activity
GO:1990931
ISO
PLAZA Integrative OrthologyRNA N6-methyladenosine dioxygenase activity AT4G02940

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005829
ISO
PLAZA Integrative Orthologycytosol AT1G14710

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR037151 Alpha-ketoglutarate-dependent dioxygenase AlkB-like superfamily
IPR044842 RNA demethylase ALKBH9B/ALKBH10B-like
Mapman id Description
35.1 not assigned.annotated