Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A05p36310 Brassica napus
A05p36320 Brassica napus
Aa31LG10G500 Aethionema arabicum
Aa31LG8G520 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_228.5719 Anthoceros agrestis
Actinidia00836 Actinidia chinensis
Actinidia00837 Actinidia chinensis
Actinidia03660 Actinidia chinensis
Actinidia03661 Actinidia chinensis
Actinidia10582 Actinidia chinensis
Actinidia10583 Actinidia chinensis
Actinidia24799 Actinidia chinensis
Actinidia30365 Actinidia chinensis
Actinidia31601 Actinidia chinensis
Ah.14g084980 Amaranthus hybridus
Ah.14g085000 Amaranthus hybridus
Ah.14g085010 Amaranthus hybridus
AL3G25110 Arabidopsis lyrata
AL3G25120 Arabidopsis lyrata
AL7G46830 Arabidopsis lyrata
Aqoxy4G01115 Aquilegia oxysepala
Aqoxy4G02323 Aquilegia oxysepala
Aqoxy7G01304 Aquilegia oxysepala
Aqoxy7G01305 Aquilegia oxysepala
Aqoxy7G02526 Aquilegia oxysepala
Aqoxy7G02527 Aquilegia oxysepala
Aqoxy7G02528 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.49CTIT Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.ADA7T8 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.EXSC1B Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.LQ166S Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.M7DLA2 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.SQBY3A Arachis hypogaea
AT3G13290 Arabidopsis thaliana
AT3G13300 Arabidopsis thaliana
ATR0751G014 Amborella trichopoda
Atru.chr1.2235 Acer truncatum
Atru.chr2.3845 Acer truncatum
AUR62017166 Chenopodium quinoa
AUR62035638 Chenopodium quinoa
BcaB04g18213 Brassica carinata
BcaB06g25474 Brassica carinata
BcaC05g29191 Brassica carinata
BcaC05g29195 Brassica carinata
BcaC05g29196 Brassica carinata
BcaC05g30230 Brassica carinata
BcaC05g30231 Brassica carinata
BolC4t28267H Brassica oleracea
BolC5t34127H Brassica oleracea
BolC5t34138H Brassica oleracea
BraA05t22432Z Brassica rapa
BraA05t22433Z Brassica rapa
C05p54620 Brassica napus
C05p54680 Brassica napus
CANSAT11G0621 Cannabis sativa
CANSAT25G0629 Cannabis sativa
CANSAT56G1356 Cannabis sativa
CARHR087910 Cardamine hirsuta
Carub.0003s1267 Capsella rubella
Carub.0003s1268 Capsella rubella
Ca_14851_v3 Cicer arietinum L.
CBR_g8647 Chara braunii
Cc05_g15500 Coffea canephora
CDE10G0783 Ceratophyllum demersum
CDE10G0998 Ceratophyllum demersum
CDE10G1208 Ceratophyllum demersum
Cfa000007 Carpinus fangiana
Cfa002372 Carpinus fangiana
Cfa004625 Carpinus fangiana
Cfa010229 Carpinus fangiana
Cfa012054 Carpinus fangiana
Cfa014684 Carpinus fangiana
Cfa016942 Carpinus fangiana
Cfa020610 Carpinus fangiana
Ciclev10007261m.g Citrus clementina
Ciclev10014046m.g Citrus clementina
CiPaw.09G112100 Carya illinoinensis
CiPaw.10G084200 Carya illinoinensis
CiPaw.12G141800 Carya illinoinensis
ClCG10G004140 Citrullus lanatus
COL.COLO4_03397 Corchorus olitorius
COL.COLO4_04989 Corchorus olitorius
COL.COLO4_07762 Corchorus olitorius
COL.COLO4_31961 Corchorus olitorius
Cpa.g.sc12.90 Carica papaya
Cpa.g.sc27.194 Carica papaya
Cre12.g553100 Chlamydomonas reinhardtii
CsaV3_3G003970 Cucumis sativus L.
CSS0030826 Camellia sinensis var. sinensis
DCAR_013771 Daucus carota
DCAR_017598 Daucus carota
Dinv04380 Davidia involucrata
Dinv04381 Davidia involucrata
Dinv06828 Davidia involucrata
Dinv10376 Davidia involucrata
Dinv40896 Davidia involucrata
Duzib170G0551 Durio zibethinus
Duzib192G0376 Durio zibethinus
Duzib213G0425 Durio zibethinus
Duzib235G0083 Durio zibethinus
Duzib268G1004 Durio zibethinus
ECA240G3156 Erigeron canadensis
EL10Ac4g07507 Beta vulgaris
Eucgr.E04228 Eucalyptus grandis
Eucgr.F02007 Eucalyptus grandis
FAN01G0741 Fragaria x ananassa
FAN03G1210 Fragaria x ananassa
FAN03G2196 Fragaria x ananassa
FAN06G0414 Fragaria x ananassa
FAN06G0659 Fragaria x ananassa
FAN06G3562 Fragaria x ananassa
FAN11G3414 Fragaria x ananassa
FAN11G3885 Fragaria x ananassa
FAN12G4233 Fragaria x ananassa
FAN16G1749 Fragaria x ananassa
FAN17G1804 Fragaria x ananassa
FAN21G1841 Fragaria x ananassa
FAN21G1995 Fragaria x ananassa
FAN21G2243 Fragaria x ananassa
FAN21G3992 Fragaria x ananassa
FAN25G1930 Fragaria x ananassa
FAN25G2172 Fragaria x ananassa
FAN25G3337 Fragaria x ananassa
FvH4_3g41972 Fragaria vesca
FvH4_3g41980 Fragaria vesca
FvH4_3g42780 Fragaria vesca
FvH4_3g42790 Fragaria vesca
FvH4_3g42820 Fragaria vesca
FvH4_3g42840 Fragaria vesca
FvH4_3g42880 Fragaria vesca
FvH4_4g01880 Fragaria vesca
FvH4_4g01881 Fragaria vesca
FvH4_7g10420 Fragaria vesca
FvH4_7g20220 Fragaria vesca
Glyma.08G337200 Glycine max
Glyma.08G337400 Glycine max
Glyma.09G016800 Glycine max
Glyma.15G122400 Glycine max
Glyma.18G072400 Glycine max
Glyma.20G068950 Glycine max
Gohir.A08G025700 Gossypium hirsutum
Gohir.A09G067600 Gossypium hirsutum
Gohir.A09G067700 Gossypium hirsutum
Gohir.D08G036200 Gossypium hirsutum
Gohir.D09G067300 Gossypium hirsutum
Gohir.D09G067400 Gossypium hirsutum
Gohir.D09G067500 Gossypium hirsutum
Gorai.004G034200 Gossypium raimondii
Gorai.006G081700 Gossypium raimondii
Gorai.006G081900 Gossypium raimondii
GSVIVG01005340001 Vitis vinifera
GSVIVG01006136001 Vitis vinifera
GSVIVG01006976001 Vitis vinifera
GSVIVG01014783001 Vitis vinifera
GSVIVG01037795001 Vitis vinifera
HanXRQChr02g0053621 Helianthus annuus
HanXRQChr03g0077781 Helianthus annuus
HanXRQChr11g0334581 Helianthus annuus
HanXRQChr13g0398151 Helianthus annuus
HanXRQChr13g0409211 Helianthus annuus
Haze_07052 Corylus avellana
Haze_09897 Corylus avellana
Hma1.2p1_0193F.1_g084140 Hydrangea macrophylla
Hma1.2p1_2995F.1_g331450 Hydrangea macrophylla
HPP92_015742 Vanilla planifolia
HPP92_015743 Vanilla planifolia
HPP92_015744 Vanilla planifolia
HPP92_017870 Vanilla planifolia
HPP92_020473 Vanilla planifolia
HPP92_020474 Vanilla planifolia
HPP92_020475 Vanilla planifolia
HPP92_026159 Vanilla planifolia
Hund01842 Selenicereus undatus
Lalb_Chr15g0088371 Lupinus albus
Lalb_Chr15g0088381 Lupinus albus
Lalb_Chr18g0050391 Lupinus albus
Lalb_Chr18g0057511 Lupinus albus
Lalb_Chr20g0115301 Lupinus albus
Lalb_Chr20g0119661 Lupinus albus
Lj1A897T44 Lonicera japonica
Lj6g0010416 Lotus japonicus
Lj6g0025458 Lotus japonicus
Lsat_1_v5_gn_1_125141 Lactuca sativa
Lsat_1_v5_gn_1_5060 Lactuca sativa
Lsat_1_v5_gn_3_63781 Lactuca sativa
Lsat_1_v5_gn_7_116441 Lactuca sativa
Lsat_1_v5_gn_9_89380 Lactuca sativa
Manes.01G005000 Manihot esculenta
Manes.05G206100 Manihot esculenta
Manes.08G015400 Manihot esculenta
Manes.09G072500 Manihot esculenta
Mapoly0037s0026 Marchantia polymorpha
MBI11_g40896_MAGBIO Magnolia biondii
MBI14_g30654_MAGBIO Magnolia biondii
MBI15_g00880_MAGBIO Magnolia biondii
MBI15_g35675_MAGBIO Magnolia biondii
MBI15_g35676_MAGBIO Magnolia biondii
MBI15_g41024_MAGBIO Magnolia biondii
MBI17_g44318_MAGBIO Magnolia biondii
MBI17_g45635_MAGBIO Magnolia biondii
MCO03G091 Micromonas commoda
MD00G1013700 Malus domestica
MD03G1039800 Malus domestica
MD11G1041300 Malus domestica
MD11G1094900 Malus domestica
Medtr2g027690 Medicago truncatula
Medtr3g061160 Medicago truncatula
MELO3C014084.2 Cucumis melo
Migut.H01726 Erythranthe guttata
Migut.H01727 Erythranthe guttata
MSTRG.14512 Avicennia marina
Nitab4.5_0000152g0190 Nicotiana tabacum
Nitab4.5_0000611g0240 Nicotiana tabacum
Nitab4.5_0001303g0100 Nicotiana tabacum
Nitab4.5_0001622g0060 Nicotiana tabacum
Nitab4.5_0003585g0020 Nicotiana tabacum
Nn1g07691 Nelumbo nucifera
Nn1g08429 Nelumbo nucifera
Oeu005542.2 Olea europaea
Oeu019693.1 Olea europaea
Oeu026625.1 Olea europaea
Oeu039810.1 Olea europaea
Oeu062674.2 Olea europaea
Os02g0722800 Oryza sativa ssp. japonica
Os06g0300800 Oryza sativa ssp. japonica
Peaxi162Scf00006g00717 Petunia axillaris
Peaxi162Scf00232g00036 Petunia axillaris
PGR004G0187 Punica granatum
PGR083G0476 Punica granatum
PGR083G0485 Punica granatum
PGR083G1788 Punica granatum
PGR083G2540 Punica granatum
Phvul.006G060500 Phaseolus vulgaris
Phvul.006G135300 Phaseolus vulgaris
Potri.001G469500 Populus trichocarpa
Potri.006G001400 Populus trichocarpa
Potri.011G166400 Populus trichocarpa
Potri.016G002100 Populus trichocarpa
Pp3c11_5850 Physcomitrium patens
Pp3c15_3440 Physcomitrium patens
Pp3c15_3450 Physcomitrium patens
Pp3c21_13620 Physcomitrium patens
Pp3c21_13650 Physcomitrium patens
Pp3c3_2660 Physcomitrium patens
Pp3c7_25280 Physcomitrium patens
Pp3c9_4880 Physcomitrium patens
Pp3s1173_10 Physcomitrium patens
PRCOL_00002031 Prasinoderma coloniale
Prupe.6G032100 Prunus persica
Psat0s2810g0040 Pisum sativum
Psat0s2810g0120 Pisum sativum
Psat0s3496g0160 Pisum sativum
Psat1g171600 Pisum sativum
Psat5g163240 Pisum sativum
Psat5g293120 Pisum sativum
Psat5g293160 Pisum sativum
Psat6g216800 Pisum sativum
Psat7g035360 Pisum sativum
Psat7g035400 Pisum sativum
PSO541G5418 Papaver somniferum
PSO675G0267 Papaver somniferum
QL05p066377 Quercus lobata
QL08p001531 Quercus lobata
RcHm_v2.0_Chr1g0328831 Rosa chinensis
RcHm_v2.0_Chr4g0386471 Rosa chinensis
RcHm_v2.0_Chr4g0386481 Rosa chinensis
RcHm_v2.0_Chr4g0386551 Rosa chinensis
RcHm_v2.0_Chr4g0386801 Rosa chinensis
RcHm_v2.0_Chr4g0386811 Rosa chinensis
RcHm_v2.0_Chr4g0386821 Rosa chinensis
RcHm_v2.0_Chr4g0386931 Rosa chinensis
RcHm_v2.0_Chr4g0386941 Rosa chinensis
RcHm_v2.0_Chr4g0387201 Rosa chinensis
RcHm_v2.0_Chr4g0387211 Rosa chinensis
RcHm_v2.0_Chr4g0389101 Rosa chinensis
RcHm_v2.0_Chr4g0389201 Rosa chinensis
RcHm_v2.0_Chr4g0389211 Rosa chinensis
RcHm_v2.0_Chr4g0389321 Rosa chinensis
RcHm_v2.0_Chr4g0389331 Rosa chinensis
RcHm_v2.0_Chr4g0389341 Rosa chinensis
RcHm_v2.0_Chr4g0389411 Rosa chinensis
RcHm_v2.0_Chr5g0075171 Rosa chinensis
Rhsim04G0009400 Rhododendron simsii
Rhsim06G0234000 Rhododendron simsii
Rhsim07G0051800 Rhododendron simsii
Rhsim09G0199200 Rhododendron simsii
Sabra06G0001500 Salix brachista
Sabra16G0007100 Salix brachista
Sabra16G0292100 Salix brachista
Sabra16G0318400 Salix brachista
Sabra19G0055500 Salix brachista
SalBow8G1221 Salvia bowleyana
SalBow8G5543 Salvia bowleyana
Sc07g0002250 Simmondsia chinensis
Sc20g0000100 Simmondsia chinensis
Sed0006897 Sechium edule
Sed0017004 Sechium edule
Sed0022328 Sechium edule
SEGI_21202 Sequoiadendron giganteum
SEGI_22382 Sequoiadendron giganteum
SEGI_27419 Sequoiadendron giganteum
SEGI_32205 Sequoiadendron giganteum
SEGI_32915 Sequoiadendron giganteum
SGA_v2.0_scaffold42G15938 Striga asiatica
SGA_v2.0_scaffold8G04429 Striga asiatica
SHI21631 Sapria himalayana
SHI21632 Sapria himalayana
SHI21637 Sapria himalayana
Solyc02g005370.1 Solanum lycopersicum
Solyc03g071660.2 Solanum lycopersicum
Solyc07g021140.1 Solanum lycopersicum
Solyc07g065950.4 Solanum lycopersicum
Solyc10g005920.4 Solanum lycopersicum
Solyc11g032180.1 Solanum lycopersicum
Solyc11g039850.1 Solanum lycopersicum
Solyc12g062490.1 Solanum lycopersicum
Sopen02g009040 Solanum pennellii
Sopen07g010040 Solanum pennellii
Sopen07g034150 Solanum pennellii
Sopen10g001880 Solanum pennellii
Sp3g11490 Schrenkiella parvula
Sp3g11500 Schrenkiella parvula
TAR626G0018 Trochodendron aralioides
TAR627G0307 Trochodendron aralioides
TAR629G2148 Trochodendron aralioides
THA.LOC104810297 Tarenaya hassleriana
THA.LOC104815682 Tarenaya hassleriana
THA.LOC104822709 Tarenaya hassleriana
Thecc.06G243400 Theobroma cacao
Thecc.07G005200 Theobroma cacao
Thhalv10019901m.g Eutrema salsugineum
Thhalv10019903m.g Eutrema salsugineum
TPR.G10492 Trifolium pratense
TPR.G17949 Trifolium pratense
TWI38G1429 Tripterygium wilfordii
TWI39G0122 Tripterygium wilfordii
TWI63G1743 Tripterygium wilfordii
unitig_578.g16308 Utricularia gibba
unitig_8.g4772 Utricularia gibba
unitig_8.g4773 Utricularia gibba
vmacro02903 Vaccinium macrocarpon
vmacro09608 Vaccinium macrocarpon
vmacro11629 Vaccinium macrocarpon
VMungo0540G0459 Vigna mungo
VMungo0540G1408 Vigna mungo
Zm00001eb023300 Zea mays
Zm00001eb073000 Zea mays
Zm00001eb182140 Zea mays
Zm00001eb189120 Zea mays
Zm00001eb253140 Zea mays
Zm00001eb253360 Zea mays

User provided reference genes

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