Gene: Pp3c21_13620

General Information

Structural Information

Species Physcomitrium patens
Gene Identifier Pp3c21_13620
Transcript Identifier Pp3c21_13620V3.3
Gene Type Coding gene
Location Chr21 : 8759190-8763209 : positive

Gene Family Information

Homologous GF
Orthologous GF

ID HOM05D001876
#Genes/#Species 351/97
Phylogenetic origin

ID ORTHO05D002002
#Genes/#Species 328/96
Phylogenetic origin

Gene Duplication Information

Tandem Duplication Tandem duplicate

Labels

Identifiers

name Pp3c21_13620V3.3
pacid 32915982
uniprot A0A2K1IRT9

Descriptions

Ortholog descriptions

Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0031087	IBA IEA	GOA Database	deadenylation-independent decapping of nuclear-transcribed mRNA
GO:0031087	IEA	InterPro	deadenylation-independent decapping of nuclear-transcribed mRNA
GO:0010071	ISO	PLAZA Integrative Orthology	root meristem specification	AT3G13300
GO:0071365	ISO	PLAZA Integrative Orthology	cellular response to auxin stimulus	AT3G13300
GO:0010072	ISO	PLAZA Integrative Orthology	primary shoot apical meristem specification	AT3G13300
GO:0009791	ISO	PLAZA Integrative Orthology	post-embryonic development	AT3G13300
GO:0006402	ISO	PLAZA Integrative Orthology	mRNA catabolic process	AT3G13300
GO:0009965	ISO	PLAZA Integrative Orthology	leaf morphogenesis	AT3G13300

Molecular Function

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0005515	IEA	InterPro	protein binding
GO:0042803	ISO	PLAZA Integrative Orthology	protein homodimerization activity	AT3G13300
GO:0003729	ISO	PLAZA Integrative Orthology	mRNA binding	AT3G13300

Cellular Component

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0000932	IBA	GOA Database	P-body
GO:0005634	ISO	PLAZA Integrative Orthology	nucleus	AT3G13300
GO:0005829	ISO	PLAZA Integrative Orthology	cytosol	AT3G13300

Color Legend

Experimental Evidence

Computational Reviewed Evidence

Electronic Evidence

InterPro	Description
IPR015943	WD40/YVTN repeat-like-containing domain superfamily
IPR045152	Enhancer of mRNA-decapping protein 4-like
IPR001680	WD40 repeat
IPR036322	WD40-repeat-containing domain superfamily

Mapman id	Description
35.1	not assigned.annotated