Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A01p00490 Brassica napus
A06p48390 Brassica napus
A06p48410 Brassica napus
A08p23510 Brassica napus
A09p58280 Brassica napus
Aa31LG6G16180 Aethionema arabicum
Aa31LG7G15120 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_117.2561 Anthoceros agrestis
Actinidia00563 Actinidia chinensis
Actinidia02237 Actinidia chinensis
Actinidia11740 Actinidia chinensis
Actinidia11741 Actinidia chinensis
Actinidia12739 Actinidia chinensis
Actinidia27863 Actinidia chinensis
Ah.01g006110 Amaranthus hybridus
Ah.01g018920 Amaranthus hybridus
Ah.05g172010 Amaranthus hybridus
AL2G13910 Arabidopsis lyrata
AL4G10570 Arabidopsis lyrata
AL4G10580 Arabidopsis lyrata
Aqoxy2G02169 Aquilegia oxysepala
Aqoxy2G02399 Aquilegia oxysepala
Aqoxy2G02405 Aquilegia oxysepala
Aqoxy3G00407 Aquilegia oxysepala
Aqoxy5G01508 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.21KZ6L Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.31YFLV Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.EC0ZI4 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.MZPK30 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.TN8Z2S Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.TQB0HP Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.V3G6M8 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.WT3DYW Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.X0RNG9 Arachis hypogaea
AT1G62020 Arabidopsis thaliana
AT2G21390 Arabidopsis thaliana
ATR0138G004 Amborella trichopoda
ATR0138G014 Amborella trichopoda
ATR0661G090 Amborella trichopoda
Atru.chr5.3108 Acer truncatum
AUR62010424 Chenopodium quinoa
AUR62014444 Chenopodium quinoa
AUR62016797 Chenopodium quinoa
AUR62034553 Chenopodium quinoa
BcaB03g12274 Brassica carinata
BcaB08g37141 Brassica carinata
BcaC01g00297 Brassica carinata
BcaC02g08712 Brassica carinata
BcaC04g19345 Brassica carinata
BcaC07g41139 Brassica carinata
BcaC07g41140 Brassica carinata
BcaNung00880 Brassica carinata
BcaNung00881 Brassica carinata
BcaNung02316 Brassica carinata
BcaNung06695 Brassica carinata
BolC1t00067H Brassica oleracea
BolC1t01696H Brassica oleracea
BolC3t20063H Brassica oleracea
BolC7t46716H Brassica oleracea
BolC8t51719H Brassica oleracea
BolC9t59507H Brassica oleracea
BraA01t00056Z Brassica rapa
BraA06t27707Z Brassica rapa
BraA06t27709Z Brassica rapa
BraA08t34308Z Brassica rapa
C01p00640 Brassica napus
C03p78030 Brassica napus
C07p63060 Brassica napus
C07p63070 Brassica napus
C08p41570 Brassica napus
C09p48460 Brassica napus
C09p67460 Brassica napus
CAN.G52.2 Capsicum annuum
CAN.G724.24 Capsicum annuum
CAN.G851.20 Capsicum annuum
CANSAT11G0742 Cannabis sativa
CARHR112280 Cardamine hirsuta
CARHR247680 Cardamine hirsuta
Carub.0002s0301 Capsella rubella
Carub.0004s0044 Capsella rubella
Ca_10459_v3 Cicer arietinum L.
Ca_20917_v3 Cicer arietinum L.
CBR_g50687 Chara braunii
Cc10_g02190 Coffea canephora
CDE04G0977 Ceratophyllum demersum
CDE04G3348 Ceratophyllum demersum
CDE12G0240 Ceratophyllum demersum
CDE12G0933 Ceratophyllum demersum
Cfa005073 Carpinus fangiana
Cfa013899 Carpinus fangiana
Ciclev10027697m.g Citrus clementina
CiPaw.05G071600 Carya illinoinensis
CiPaw.06G131000 Carya illinoinensis
ClCG02G004680 Citrullus lanatus
ClCG11G004040 Citrullus lanatus
ClCG11G004050 Citrullus lanatus
ClCG11G004060 Citrullus lanatus
COL.COLO4_26012 Corchorus olitorius
COL.COLO4_26013 Corchorus olitorius
COL.COLO4_36437 Corchorus olitorius
Cpa.g.sc139.25 Carica papaya
Cpa.g.sc139.26 Carica papaya
Cpa.g.sc139.27 Carica papaya
Cpa.g.sc150.45 Carica papaya
Cre13.g565850 Chlamydomonas reinhardtii
CsaV3_2G015140 Cucumis sativus L.
CsaV3_2G015150 Cucumis sativus L.
CsaV3_7G000230 Cucumis sativus L.
CSS0022604 Camellia sinensis var. sinensis
CSS0030753 Camellia sinensis var. sinensis
DCAR_001550 Daucus carota
DCAR_009950 Daucus carota
DCAR_022446 Daucus carota
Dinv23476 Davidia involucrata
Dinv31806 Davidia involucrata
Dinv39480 Davidia involucrata
Dinv42017 Davidia involucrata
Duzib052G0592 Durio zibethinus
Duzib132G0667 Durio zibethinus
Duzib132G0965 Durio zibethinus
Duzib248G0413 Durio zibethinus
ECA232G0179 Erigeron canadensis
ECA236G0010 Erigeron canadensis
ECA247G1031 Erigeron canadensis
ECA247G2540 Erigeron canadensis
EL10Ac1g00565 Beta vulgaris
EL10Ac9g21671 Beta vulgaris
Eucgr.G01708 Eucalyptus grandis
Eucgr.G01711 Eucalyptus grandis
Eucgr.G01717 Eucalyptus grandis
FAN04G2764 Fragaria x ananassa
FAN08G1049 Fragaria x ananassa
FAN11G0285 Fragaria x ananassa
FAN13G0467 Fragaria x ananassa
FAN13G0901 Fragaria x ananassa
FAN16G0137 Fragaria x ananassa
FAN18G0598 Fragaria x ananassa
FAN18G1500 Fragaria x ananassa
FAN18G2366 Fragaria x ananassa
FAN18G2732 Fragaria x ananassa
FAN18G4145 Fragaria x ananassa
FAN21G0038 Fragaria x ananassa
FAN25G1737 Fragaria x ananassa
FvH4_3g10280 Fragaria vesca
FvH4_5g12340 Fragaria vesca
FvH4_5g12390 Fragaria vesca
FvH4_5g12391 Fragaria vesca
FvH4_5g12420 Fragaria vesca
Glyma.04G255100 Glycine max
Glyma.10G199300 Glycine max
Glyma.11G113000 Glycine max
Glyma.12G038900 Glycine max
Glyma.20G190900 Glycine max
Gohir.A03G197900 Gossypium hirsutum
Gohir.A03G198000 Gossypium hirsutum
Gohir.A04G124000 Gossypium hirsutum
Gohir.A12G041700 Gossypium hirsutum
Gohir.A12G041800 Gossypium hirsutum
Gohir.D02G219200 Gossypium hirsutum
Gohir.D02G219300 Gossypium hirsutum
Gohir.D04G166100 Gossypium hirsutum
Gohir.D12G030400 Gossypium hirsutum
Gohir.D12G030500 Gossypium hirsutum
Gorai.005G247200 Gossypium raimondii
Gorai.005G247300 Gossypium raimondii
Gorai.008G031300 Gossypium raimondii
Gorai.008G031400 Gossypium raimondii
Gorai.012G154500 Gossypium raimondii
GSVIVG01002897001 Vitis vinifera
GSVIVG01009813001 Vitis vinifera
HanXRQChr02g0041771 Helianthus annuus
HanXRQChr04g0106481 Helianthus annuus
HanXRQChr04g0106491 Helianthus annuus
HanXRQChr07g0186941 Helianthus annuus
HanXRQChr08g0224521 Helianthus annuus
HanXRQChr09g0269411 Helianthus annuus
HanXRQChr16g0501391 Helianthus annuus
Haze_02309 Corylus avellana
Haze_22578 Corylus avellana
Hma1.2p1_0066F.1_g035930 Hydrangea macrophylla
Hma1.2p1_0148F.1_g066030 Hydrangea macrophylla
Hma1.2p1_0851F.1_g228330 Hydrangea macrophylla
Hma1.2p1_1909F.1_g307220 Hydrangea macrophylla
HPP92_007439 Vanilla planifolia
HPP92_022469 Vanilla planifolia
HPP92_022470 Vanilla planifolia
HPP92_027286 Vanilla planifolia
Hund00230 Selenicereus undatus
Hund06265 Selenicereus undatus
Hund17211 Selenicereus undatus
Lalb_Chr01g0010301 Lupinus albus
Lalb_Chr03g0036321 Lupinus albus
Lalb_Chr18g0048431 Lupinus albus
Lalb_Chr18g0048441 Lupinus albus
Lalb_Chr19g0129341 Lupinus albus
Lalb_Chr19g0129361 Lupinus albus
Lj3g0014640 Lotus japonicus
Lj4A30T27 Lonicera japonica
Lj4C790T15 Lonicera japonica
Lj5A191T46 Lonicera japonica
Lj5g0010599 Lotus japonicus
Lsat_1_v5_gn_0_16160 Lactuca sativa
Lsat_1_v5_gn_0_34441 Lactuca sativa
Lsat_1_v5_gn_1_120080 Lactuca sativa
Lsat_1_v5_gn_1_120300 Lactuca sativa
Lsat_1_v5_gn_1_16420 Lactuca sativa
Lsat_1_v5_gn_4_116501 Lactuca sativa
Lsat_1_v5_gn_5_95360 Lactuca sativa
Lsat_1_v5_gn_7_52080 Lactuca sativa
Manes.04G085400 Manihot esculenta
Manes.11G087700 Manihot esculenta
Manes.18G018100 Manihot esculenta
Mapoly0007s0005 Marchantia polymorpha
MBI01_g29868_MAGBIO Magnolia biondii
MCO07G001 Micromonas commoda
MD05G1271000 Malus domestica
MD06G1214600 Malus domestica
MD10G1248600 Malus domestica
MD10G1248700 Malus domestica
MD10G1248800 Malus domestica
MD10G1249800 Malus domestica
MD10G1249900 Malus domestica
MD10G1250100 Malus domestica
MD10G1250200 Malus domestica
MD10G1250400 Malus domestica
MD10G1250600 Malus domestica
MD10G1250700 Malus domestica
MD10G1251000 Malus domestica
MD10G1251300 Malus domestica
MD10G1251600 Malus domestica
MD14G1225500 Malus domestica
Medtr1g090827 Medicago truncatula
Medtr4g071130 Medicago truncatula
MELO3C013434.2 Cucumis melo
MELO3C023339.2 Cucumis melo
MELO3C023340.2 Cucumis melo
Migut.C00783 Erythranthe guttata
Migut.N03123 Erythranthe guttata
MSTRG.1232 Avicennia marina
MSTRG.22321 Avicennia marina
MSTRG.25213 Avicennia marina
Nitab4.5_0000164g0010 Nicotiana tabacum
Nitab4.5_0000352g0090 Nicotiana tabacum
Nitab4.5_0001840g0100 Nicotiana tabacum
Nitab4.5_0003674g0060 Nicotiana tabacum
Nitab4.5_0005484g0020 Nicotiana tabacum
Nitab4.5_0008608g0010 Nicotiana tabacum
Nn1g00780 Nelumbo nucifera
Nn1g00891 Nelumbo nucifera
Nn1g03562 Nelumbo nucifera
Nn1g04235 Nelumbo nucifera
Nn2g15242 Nelumbo nucifera
Nn6g32197 Nelumbo nucifera
Nn6g32269 Nelumbo nucifera
Oeu007039.2 Olea europaea
Oeu007319.1 Olea europaea
Oeu027860.1 Olea europaea
Oeu046237.2 Olea europaea
Oeu047739.1 Olea europaea
Oeu055743.2 Olea europaea
Oeu055744.1 Olea europaea
Os03g0711400 Oryza sativa ssp. japonica
Os03g0711500 Oryza sativa ssp. japonica
Os09g0127800 Oryza sativa ssp. japonica
Peaxi162Scf00527g00516 Petunia axillaris
Peaxi162Scf00640g00018 Petunia axillaris
Peaxi162Scf00656g00006 Petunia axillaris
PGR042G2470 Punica granatum
PGR142G0164 Punica granatum
PGSC0003DMG400002366 Solanum tuberosum
PGSC0003DMG400003762 Solanum tuberosum
PGSC0003DMG400010606 Solanum tuberosum
Phvul.007G141700 Phaseolus vulgaris
Phvul.011G041000 Phaseolus vulgaris
Potri.012G074800 Populus trichocarpa
Potri.015G069700 Populus trichocarpa
Pp3c11_12600 Physcomitrium patens
Pp3c1_12990 Physcomitrium patens
Pp3c2_24120 Physcomitrium patens
PRCOL_00005227 Prasinoderma coloniale
Prupe.4G091800 Prunus persica
Prupe.5G220000 Prunus persica
Psat6g173680 Pisum sativum
Psat7g139920 Pisum sativum
PSO170G6107 Papaver somniferum
PSO210G4337 Papaver somniferum
PSO541G5313 Papaver somniferum
PSO675G5833 Papaver somniferum
QL02p010587 Quercus lobata
QL11p045581 Quercus lobata
RcHm_v2.0_Chr5g0016541 Rosa chinensis
RcHm_v2.0_Chr6g0256671 Rosa chinensis
RcHm_v2.0_Chr6g0269331 Rosa chinensis
RcHm_v2.0_Chr7g0185121 Rosa chinensis
RcHm_v2.0_Chr7g0185201 Rosa chinensis
Rhsim05G0069700 Rhododendron simsii
Rhsim11G0182000 Rhododendron simsii
Sabra12G0053300 Salix brachista
Sabra15G0093900 Salix brachista
SalBow7G4459 Salvia bowleyana
SalBow8G0956 Salvia bowleyana
Sc08g0000770 Simmondsia chinensis
Sc18g0005270 Simmondsia chinensis
Sed0008002 Sechium edule
Sed0010157 Sechium edule
Sed0010358 Sechium edule
Sed0011224 Sechium edule
Sed0021018 Sechium edule
SEGI_07615 Sequoiadendron giganteum
SEGI_34099 Sequoiadendron giganteum
SGA_v2.0_scaffold11G05860 Striga asiatica
SGA_v2.0_scaffold11G05861 Striga asiatica
SGA_v2.0_scaffold11G05862 Striga asiatica
SGA_v2.0_scaffold201G41321 Striga asiatica
SGA_v2.0_scaffold201G41323 Striga asiatica
SGA_v2.0_scaffold9G04861 Striga asiatica
SHI27926 Sapria himalayana
SMO266G0101 Selaginella moellendorffii
SMO297G0001 Selaginella moellendorffii
SMO347G0456 Selaginella moellendorffii
SMO364G0732 Selaginella moellendorffii
Solyc04g080980.2 Solanum lycopersicum
Solyc07g032100.3 Solanum lycopersicum
Sopen04g034590 Solanum pennellii
Sopen07g015440 Solanum pennellii
Sp4g00570 Schrenkiella parvula
Sp7g36760 Schrenkiella parvula
SpUn0316_0020 Schrenkiella parvula
SpUn0316_0030 Schrenkiella parvula
TAR376G1169 Trochodendron aralioides
TAR381G0196 Trochodendron aralioides
TAR381G0804 Trochodendron aralioides
TAR381G1644 Trochodendron aralioides
TAR625G0510 Trochodendron aralioides
TAR628G1311 Trochodendron aralioides
TAR628G1631 Trochodendron aralioides
TAR629G0954 Trochodendron aralioides
THA.LOC104804120 Tarenaya hassleriana
THA.LOC104807758 Tarenaya hassleriana
THA.LOC104824801 Tarenaya hassleriana
THA.LOC104824804 Tarenaya hassleriana
THA.LOC104825202 Tarenaya hassleriana
Thecc.02G078200 Theobroma cacao
Thecc.02G078300 Theobroma cacao
Thecc.08G036600 Theobroma cacao
Thhalv10000016m.g Eutrema salsugineum
Thhalv10024239m.g Eutrema salsugineum
Thhalv10024240m.g Eutrema salsugineum
TPR.G30498 Trifolium pratense
TPR.G37769 Trifolium pratense
TWI31G0385 Tripterygium wilfordii
TWI81G0125 Tripterygium wilfordii
TWI81G0871 Tripterygium wilfordii
unitig_21.g20155 Utricularia gibba
unitig_21.g20156 Utricularia gibba
unitig_744.g24602 Utricularia gibba
unitig_8.g3379 Utricularia gibba
unitig_8.g3380 Utricularia gibba
vmacro02068 Vaccinium macrocarpon
vmacro05233 Vaccinium macrocarpon
vmacro17445 Vaccinium macrocarpon
VMungo0720G1880 Vigna mungo
VMungo1127G0839 Vigna mungo
Zm00001eb054910 Zea mays
Zm00001eb120410 Zea mays
Zm00001eb216390 Zea mays

User provided reference genes

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