Gene: FAN18G2732
General Information
Structural Information
- Species Fragaria x ananassa
- Gene Identifier FAN18G2732
- Transcript Identifier FAN18G2732.1
- Gene Type Coding gene
- Location Fvb5-1 : 6255711-6272364 : positive
Gene Family Information
- ID HOM05D001785
- #Genes/#Species 366/100
- Phylogenetic origin
- ID ORTHO05D001933
- #Genes/#Species 335/99
- Phylogenetic origin
Gene Duplication Information
- Block Duplication Block duplicate
Labels
Identifiers
- id maker-Fvb5-1-snap-gene-62.92.v1.0.a1
- pacid 50495273
Descriptions
- Description K05236 - coatomer protein complex, subunit alpha (xenin) (COPA)
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0006886 | IEA | InterPro | intracellular protein transport | |
| GO:0016192 | IEA | InterPro | vesicle-mediated transport | |
| GO:0015743 | IEA | InterPro | malate transport |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005515 | IEA | InterPro | protein binding | |
| GO:0005198 | IEA | InterPro | structural molecule activity |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0030117 | IEA | InterPro | membrane coat | |
| GO:0030126 | IEA | InterPro | COPI vesicle coat | |
| GO:0005829 | ISO | PLAZA Integrative Orthology | cytosol | AT2G21390 |
| GO:0005886 | ISO | PLAZA Integrative Orthology | plasma membrane | AT1G62020 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR001680 | WD40 repeat |
| IPR016024 | Armadillo-type fold |
| IPR006692 | Coatomer, WD associated region |
| IPR010714 | Coatomer, alpha subunit, C-terminal |
| IPR015943 | WD40/YVTN repeat-like-containing domain superfamily |
| IPR020966 | Aluminum-activated malate transporter |
| IPR020472 | G-protein beta WD-40 repeat |
| IPR036322 | WD40-repeat-containing domain superfamily |
| IPR011989 | Armadillo-like helical |
| IPR000357 | HEAT repeat |
| Mapman id | Description |
|---|---|
| 13.4.1.2.4 | Cell cycle organisation.cytokinesis.preprophase microtubule organization.TON1-TRM-PP2A (TTP) preprophase band formation complex.scaffolding component PP2A-phosphatase |
| 18.4.25.1.2.1 | Protein modification.phosphorylation.protein serine/threonine phosphatase superfamily.PPP Fe-Zn-dependent phosphatase families.PP2A-class phosphatase complexes.scaffold component A |
| 22.2.1.1.1 | Vesicle trafficking.Golgi-ER retrograde trafficking.Coat protein I (COPI) coatomer machinery.coat protein complex.subunit alpha |
| 24.3.11 | Solute transport.channels.anion channel (QUAC/ALMT) |