Gene: Zm00001eb054910
General Information
Structural Information
- Species Zea mays
- Gene Identifier Zm00001eb054910
- Transcript Identifier Zm00001eb054910_T002
- Gene Type Coding gene
- Location 1 : 274194621-274199515 : negative
Gene Family Information
- ID HOM05D001785
- #Genes/#Species 366/100
- Phylogenetic origin
- ID ORTHO05D001933
- #Genes/#Species 335/99
- Phylogenetic origin
Gene Duplication Information
- Block Duplication Block duplicate
Labels
Identifiers
- tid Zm00001eb054910_T002
- pid Zm00001eb054910_P002
- uniprot A0A317Y7K8
- uniprot C0PNL9
- uniprot A0A1D6L1X4
- V4_identifier Zm00001d033734
Descriptions
- Description Zm00001e005441
- Description Coatomer subunit alpha-1
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0006890 | IBA | GOA Database | retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum | |
| GO:0016192 | IEA | GOA Database | vesicle-mediated transport | |
| GO:0016192 | IEA | InterPro | vesicle-mediated transport | |
| GO:0006886 | IBA IEA | GOA Database | intracellular protein transport | |
| GO:0006886 | IEA | InterPro | intracellular protein transport | |
| GO:0015031 | IEA | GOA Database | protein transport | |
| GO:0006891 | IBA | GOA Database | intra-Golgi vesicle-mediated transport | |
| GO:0006888 | IBA | GOA Database | endoplasmic reticulum to Golgi vesicle-mediated transport |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005198 | IEA | GOA Database | structural molecule activity | |
| GO:0005198 | IEA | InterPro | structural molecule activity | |
| GO:0005515 | IEA | InterPro | protein binding |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005886 | ISO | PLAZA Integrative Orthology | plasma membrane | AT1G62020 |
| GO:0005829 | ISO | PLAZA Integrative Orthology | cytosol | AT2G21390 |
| GO:0030126 | IBA IEA | GOA Database | COPI vesicle coat | |
| GO:0030126 | IEA | InterPro | COPI vesicle coat | |
| GO:0030117 | IEA | GOA Database | membrane coat | |
| GO:0030117 | IEA | InterPro | membrane coat | |
| GO:0030663 | IEA | GOA Database | COPI-coated vesicle membrane | |
| GO:0005794 | IEA | GOA Database | Golgi apparatus | |
| GO:0005737 | IEA | GOA Database | cytoplasm | |
| GO:0000139 | IEA | GOA Database | Golgi membrane | |
| GO:0016020 | IEA | GOA Database | membrane |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR020472 | G-protein beta WD-40 repeat |
| IPR001680 | WD40 repeat |
| IPR015943 | WD40/YVTN repeat-like-containing domain superfamily |
| IPR016391 | Coatomer alpha subunit |
| IPR006692 | Coatomer, WD associated region |
| IPR036322 | WD40-repeat-containing domain superfamily |
| IPR011048 | Cytochrome cd1-nitrite reductase-like, haem d1 domain superfamily |
| IPR010714 | Coatomer, alpha subunit, C-terminal |
| Mapman id | Description |
|---|---|
| 22.2.1.1.1 | Vesicle trafficking.Golgi-ER retrograde trafficking.Coat protein I (COPI) coatomer machinery.coat protein complex.subunit alpha |