Gene: Nitab4.5_0003674g0060
General Information
Structural Information
- Species Nicotiana tabacum
- Gene Identifier Nitab4.5_0003674g0060
- Transcript Identifier Nitab4.5_0003674g0060.1
- Gene Type Coding gene
- Location Nitab4.5_0003674 : 116242-121262 : negative
Gene Family Information
- ID HOM05D001785
- #Genes/#Species 366/100
- Phylogenetic origin
- ID ORTHO05D001933
- #Genes/#Species 335/99
- Phylogenetic origin
Gene Duplication Information
Labels
Identifiers
- tid Nitab4.5_0003674g0060.1
- SR1-identifier Nta07g24660.1
Descriptions
- Description WD40 repeat, G-protein beta WD-40 repeat, Coatomer, WD associated region, WD40/YVTN repeat-like-containing domain, WD40-repeat-containing domain, WD40 repeat, conserved site, Coatomer, alpha subunit, C-terminal, Coatomer alpha subunit, Cytochrome cd1-nitrite reductase-like, haem d1 domain
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0006886 | IEA | InterPro | intracellular protein transport | |
| GO:0016192 | IEA | InterPro | vesicle-mediated transport |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005515 | IEA | InterPro | protein binding | |
| GO:0005198 | IEA | InterPro | structural molecule activity |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0030117 | IEA | InterPro | membrane coat | |
| GO:0030126 | IEA | InterPro | COPI vesicle coat | |
| GO:0005829 | ISO | PLAZA Integrative Orthology | cytosol | AT2G21390 |
| GO:0005886 | ISO | PLAZA Integrative Orthology | plasma membrane | AT1G62020 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR001680 | WD40 repeat |
| IPR020472 | G-protein beta WD-40 repeat |
| IPR015943 | WD40/YVTN repeat-like-containing domain superfamily |
| IPR036322 | WD40-repeat-containing domain superfamily |
| IPR016391 | Coatomer alpha subunit |
| IPR006692 | Coatomer, WD associated region |
| IPR010714 | Coatomer, alpha subunit, C-terminal |
| IPR011048 | Cytochrome cd1-nitrite reductase-like, haem d1 domain superfamily |
| Mapman id | Description |
|---|---|
| 22.2.1.1.1 | Vesicle trafficking.Golgi-ER retrograde trafficking.Coat protein I (COPI) coatomer machinery.coat protein complex.subunit alpha |