Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A04p03780 Brassica napus
A05p44840 Brassica napus
A07p23230 Brassica napus
A09p49970 Brassica napus
A10p23540 Brassica napus
Aa31LG10G11970 Aethionema arabicum
Aa31LG11G14210 Aethionema arabicum
Aa31LG5G12510 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_362.2685 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_362.2686 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_368.1488 Anthoceros agrestis
Actinidia17559 Actinidia chinensis
Actinidia26229 Actinidia chinensis
Actinidia26230 Actinidia chinensis
Ah.10g031760 Amaranthus hybridus
AL3G11140 Arabidopsis lyrata
AL5G38530 Arabidopsis lyrata
Aqoxy2G00352 Aquilegia oxysepala
Aqoxy3G03468 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.0JH0K6 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.8C7INK Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.AGM2GS Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.I2BVW6 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.N5PDN1 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.Q4SW2C Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.S7AN2D Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.ZZ26N9 Arachis hypogaea
AT1G33320 Arabidopsis thaliana
AT3G01120 Arabidopsis thaliana
AT3G57050 Arabidopsis thaliana
ATR0752G123 Amborella trichopoda
ATR1134G130 Amborella trichopoda
Atru.chr1.1491 Acer truncatum
Atru.chr8.312 Acer truncatum
AUR62018105 Chenopodium quinoa
AUR62030340 Chenopodium quinoa
AUR62034439 Chenopodium quinoa
AUR62040828 Chenopodium quinoa
BcaB02g07623 Brassica carinata
BcaB02g08332 Brassica carinata
BcaB08g36902 Brassica carinata
BcaC01g04503 Brassica carinata
BcaC02g09899 Brassica carinata
BcaC03g13415 Brassica carinata
BcaC04g24236 Brassica carinata
BcaC05g30383 Brassica carinata
BcaC05g30493 Brassica carinata
BcaC07g40051 Brassica carinata
BcaC07g40082 Brassica carinata
BcaNung03313 Brassica carinata
BolC2t06698H Brassica oleracea
BolC3t16244H Brassica oleracea
BolC4t25094H Brassica oleracea
BolC5t35117H Brassica oleracea
BolC8t50852H Brassica oleracea
BolC9t59015H Brassica oleracea
BraA03t12438Z Brassica rapa
BraA04t16056Z Brassica rapa
BraA05t23173Z Brassica rapa
BraA07t29987Z Brassica rapa
BraA09t40447Z Brassica rapa
BraA10t44420Z Brassica rapa
C02p07670 Brassica napus
C04p35400 Brassica napus
C06p24110 Brassica napus
C08p32380 Brassica napus
C09p61770 Brassica napus
C09p75430 Brassica napus
CAN.G1057.1 Capsicum annuum
CAN.G127.23 Capsicum annuum
CAN.G641.73 Capsicum annuum
CAN.G979.1 Capsicum annuum
CAN.G991.4 Capsicum annuum
CANSAT64G1919 Cannabis sativa
CANSAT64G2870 Cannabis sativa
CARHR032660 Cardamine hirsuta
CARHR032730 Cardamine hirsuta
CARHR075930 Cardamine hirsuta
CARHR167240 Cardamine hirsuta
CARHR197980 Cardamine hirsuta
Carub.0003s0105 Capsella rubella
Carub.0005s2385 Capsella rubella
Ca_06787_v3 Cicer arietinum L.
Ca_08407_v3 Cicer arietinum L.
Ca_26544_v3 Cicer arietinum L.
Ca_27496_v3 Cicer arietinum L.
Ca_28177_v3 Cicer arietinum L.
Ca_28217_v3 Cicer arietinum L.
CBR_g168 Chara braunii
CBR_g169 Chara braunii
CBR_g175 Chara braunii
CBR_g178 Chara braunii
CBR_g179 Chara braunii
CBR_g34755 Chara braunii
CBR_g45651 Chara braunii
CBR_g48674 Chara braunii
CBR_g53946 Chara braunii
CBR_g57727 Chara braunii
Cc00_g29950 Coffea canephora
Cc06_g18900 Coffea canephora
Cc07_g03590 Coffea canephora
CDE02G0445 Ceratophyllum demersum
CDE06G0603 Ceratophyllum demersum
CDE09G0505 Ceratophyllum demersum
Cfa007583 Carpinus fangiana
Cfa020023 Carpinus fangiana
Cfa023692 Carpinus fangiana
Cfa024823 Carpinus fangiana
Cfa025733 Carpinus fangiana
Ciclev10011434m.g Citrus clementina
Ciclev10020055m.g Citrus clementina
CiPaw.03G024300 Carya illinoinensis
CiPaw.04G015400 Carya illinoinensis
CiPaw.09G046100 Carya illinoinensis
ClCG08G009380 Citrullus lanatus
ClCG10G015340 Citrullus lanatus
COL.COLO4_05063 Corchorus olitorius
COL.COLO4_05064 Corchorus olitorius
COL.COLO4_05065 Corchorus olitorius
COL.COLO4_10343 Corchorus olitorius
Cpa.g.c28082.1 Carica papaya
Cpa.g.sc5.210 Carica papaya
Cre03.g144627 Chlamydomonas reinhardtii
Cre16.g669550 Chlamydomonas reinhardtii
CsaV3_3G041150 Cucumis sativus L.
CsaV3_6G031510 Cucumis sativus L.
CSS0001636 Camellia sinensis var. sinensis
CSS0010163 Camellia sinensis var. sinensis
CSS0019809 Camellia sinensis var. sinensis
CSS0022883 Camellia sinensis var. sinensis
CSS0025782 Camellia sinensis var. sinensis
CSS0028295 Camellia sinensis var. sinensis
DCAR_013636 Daucus carota
DCAR_020551 Daucus carota
DCAR_025856 Daucus carota
Dinv01982 Davidia involucrata
Dinv05063 Davidia involucrata
Dinv11510 Davidia involucrata
Dinv33778 Davidia involucrata
Dinv34124 Davidia involucrata
Dinv34126 Davidia involucrata
Dinv34377 Davidia involucrata
Duzib093G2101 Durio zibethinus
Duzib147G0211 Durio zibethinus
Duzib187G1340 Durio zibethinus
ECA232G2365 Erigeron canadensis
ECA236G4630 Erigeron canadensis
ECA248G3688 Erigeron canadensis
EL10Ac2g03004 Beta vulgaris
EL10Ac3g07203 Beta vulgaris
EL10Ac3g07205 Beta vulgaris
Eucgr.A02261 Eucalyptus grandis
Eucgr.I01959 Eucalyptus grandis
FAN02G1975 Fragaria x ananassa
FAN05G3129 Fragaria x ananassa
FAN09G3279 Fragaria x ananassa
FAN11G0160 Fragaria x ananassa
FAN14G4386 Fragaria x ananassa
FAN16G3033 Fragaria x ananassa
FAN21G0837 Fragaria x ananassa
FvH4_3g30150 Fragaria vesca
FvH4_6g48090 Fragaria vesca
Glyma.03G129700 Glycine max
Glyma.09G235400 Glycine max
Glyma.18G261600 Glycine max
Glyma.19G132000 Glycine max
Gohir.A05G368400 Gossypium hirsutum
Gohir.A07G206200 Gossypium hirsutum
Gohir.A11G308100 Gossypium hirsutum
Gohir.D04G046900 Gossypium hirsutum
Gohir.D07G212300 Gossypium hirsutum
Gohir.D11G323500 Gossypium hirsutum
Gorai.001G240000 Gossypium raimondii
Gorai.001G240300 Gossypium raimondii
Gorai.007G353500 Gossypium raimondii
Gorai.012G052100 Gossypium raimondii
GSVIVG01011450001 Vitis vinifera
GSVIVG01033607001 Vitis vinifera
HanXRQChr01g0009291 Helianthus annuus
HanXRQChr01g0009311 Helianthus annuus
HanXRQChr06g0176921 Helianthus annuus
HanXRQChr09g0262661 Helianthus annuus
HanXRQChr11g0325161 Helianthus annuus
HanXRQChr17g0536541 Helianthus annuus
Haze_14505 Corylus avellana
Haze_20194 Corylus avellana
Haze_26308 Corylus avellana
Haze_26566 Corylus avellana
Hma1.2p1_0409F.1_g146780 Hydrangea macrophylla
HPP92_013743 Vanilla planifolia
HPP92_018345 Vanilla planifolia
Hund13191 Selenicereus undatus
Hund24627 Selenicereus undatus
Lalb_Chr02g0159171 Lupinus albus
Lalb_Chr20g0110151 Lupinus albus
Lalb_Chr25g0286861 Lupinus albus
Lj1A1103T61 Lonicera japonica
Lj1g0005155 Lotus japonicus
Lj2g0003873 Lotus japonicus
Lj2g0016140 Lotus japonicus
Lj3C1034G14 Lonicera japonica
Lsat_1_v5_gn_2_82441 Lactuca sativa
Lsat_1_v5_gn_4_169480 Lactuca sativa
Lsat_1_v5_gn_8_82641 Lactuca sativa
Manes.01G093400 Manihot esculenta
Manes.01G122300 Manihot esculenta
Manes.02G048100 Manihot esculenta
Manes.02G132001 Manihot esculenta
Manes.09G007000 Manihot esculenta
Mapoly0005s0149 Marchantia polymorpha
Mapoly0022s0171 Marchantia polymorpha
Mapoly0056s0126 Marchantia polymorpha
MBI05_g05246_MAGBIO Magnolia biondii
MBI16_g23860_MAGBIO Magnolia biondii
MCO06G038 Micromonas commoda
MCO10G197 Micromonas commoda
MCO10G385 Micromonas commoda
MCO12G466 Micromonas commoda
MCO13G064 Micromonas commoda
MD00G1088500 Malus domestica
MD09G1054200 Malus domestica
MD12G1093700 Malus domestica
MD17G1051900 Malus domestica
Medtr1g064320 Medicago truncatula
Medtr6g012730 Medicago truncatula
Medtr7g011230 Medicago truncatula
MELO3C009845.2 Cucumis melo
MELO3C026534.2 Cucumis melo
Migut.H00682 Erythranthe guttata
Migut.J01673 Erythranthe guttata
Migut.K00129 Erythranthe guttata
Migut.K01306 Erythranthe guttata
MSTRG.23920 Avicennia marina
MSTRG.3335 Avicennia marina
MSTRG.7398 Avicennia marina
Nitab4.5_0000118g0010 Nicotiana tabacum
Nitab4.5_0000212g0080 Nicotiana tabacum
Nitab4.5_0000568g0140 Nicotiana tabacum
Nitab4.5_0000571g0120 Nicotiana tabacum
Nitab4.5_0001364g0030 Nicotiana tabacum
Nitab4.5_0001591g0250 Nicotiana tabacum
Nitab4.5_0002162g0100 Nicotiana tabacum
Nitab4.5_0002208g0110 Nicotiana tabacum
Nitab4.5_0003975g0010 Nicotiana tabacum
Nitab4.5_0010283g0020 Nicotiana tabacum
Nn2g14860 Nelumbo nucifera
Nn2g15123 Nelumbo nucifera
Nn3g17310 Nelumbo nucifera
Nn7g36657 Nelumbo nucifera
Oeu000840.3 Olea europaea
Oeu015939.1 Olea europaea
Oeu063773.2 Olea europaea
Os03g0376100 Oryza sativa ssp. japonica
Os06g0175800 Oryza sativa ssp. japonica
Os06g0176900 Oryza sativa ssp. japonica
Os06g0242600 Oryza sativa ssp. japonica
Os10g0399100 Oryza sativa ssp. japonica
Os10g0399200 Oryza sativa ssp. japonica
Os10g0399700 Oryza sativa ssp. japonica
Peaxi162Scf00166g01052 Petunia axillaris
Peaxi162Scf00420g00564 Petunia axillaris
Peaxi162Scf00451g00513 Petunia axillaris
Peaxi162Scf00629g00115 Petunia axillaris
Peaxi162Scf00970g00166 Petunia axillaris
Peaxi162Scf01378g00122 Petunia axillaris
PGR004G0017 Punica granatum
PGR031G0959 Punica granatum
PGR031G1759 Punica granatum
PGR044G2076 Punica granatum
PGSC0003DMG400001884 Solanum tuberosum
PGSC0003DMG400008477 Solanum tuberosum
PGSC0003DMG400025134 Solanum tuberosum
PGSC0003DMG400029836 Solanum tuberosum
PGSC0003DMG400035945 Solanum tuberosum
Phvul.001G125400 Phaseolus vulgaris
Phvul.008G038100 Phaseolus vulgaris
Potri.016G038200 Populus trichocarpa
Potri.017G086500 Populus trichocarpa
Pp3c20_1550 Physcomitrium patens
Pp3c23_18410 Physcomitrium patens
Pp3c5_1990 Physcomitrium patens
Pp3s30_940 Physcomitrium patens
Pp3s476_12 Physcomitrium patens
Pp3s476_16 Physcomitrium patens
PRCOL_00000807 Prasinoderma coloniale
PRCOL_00005923 Prasinoderma coloniale
PRCOL_00006557 Prasinoderma coloniale
PRCOL_00006688 Prasinoderma coloniale
Prupe.3G264300 Prunus persica
Prupe.7G042400 Prunus persica
Psat1g071680 Pisum sativum
Psat3g199280 Pisum sativum
Psat6g070960 Pisum sativum
PSO017G5717 Papaver somniferum
PSO063G3870 Papaver somniferum
PSO063G4026 Papaver somniferum
PSO063G6072 Papaver somniferum
PSO063G6669 Papaver somniferum
PSO170G6374 Papaver somniferum
PSO832G3607 Papaver somniferum
PSO832G4537 Papaver somniferum
QL02p084735 Quercus lobata
QL07p008834 Quercus lobata
QL07p008853 Quercus lobata
RcHm_v2.0_Chr2g0125281 Rosa chinensis
RcHm_v2.0_Chr2g0167411 Rosa chinensis
Rhsim03G0041800 Rhododendron simsii
Rhsim03G0042000 Rhododendron simsii
Rhsim03G0042100 Rhododendron simsii
Rhsim08G0071000 Rhododendron simsii
RhsimUnG0220800 Rhododendron simsii
RhsimUnG0239200 Rhododendron simsii
Sabra16G0040100 Salix brachista
Sabra16G0044800 Salix brachista
Sabra17G0076200 Salix brachista
SalBow1G3742 Salvia bowleyana
SalBow2G0687 Salvia bowleyana
SalBow2G1785 Salvia bowleyana
Sc11g0007160 Simmondsia chinensis
Sc13g0001250 Simmondsia chinensis
Sed0022611 Sechium edule
Sed0026483 Sechium edule
SEGI_02944 Sequoiadendron giganteum
SEGI_15659 Sequoiadendron giganteum
SEGI_35498 Sequoiadendron giganteum
SGA_v2.0_scaffold236G43763 Striga asiatica
SGA_v2.0_scaffold4G02433 Striga asiatica
SGA_v2.0_scaffold94G28527 Striga asiatica
SHI25863 Sapria himalayana
SMO112G0072 Selaginella moellendorffii
SMO351G0107 Selaginella moellendorffii
SMO358G0226 Selaginella moellendorffii
SMO364G0940 Selaginella moellendorffii
Solyc02g067180.3 Solanum lycopersicum
Solyc04g055230.2 Solanum lycopersicum
Solyc08g066620.3 Solanum lycopersicum
Solyc10g079720.2 Solanum lycopersicum
Sopen02g016340 Solanum pennellii
Sopen04g025080 Solanum pennellii
Sopen10g030350 Solanum pennellii
Sp3g01000 Schrenkiella parvula
Sp5g05530 Schrenkiella parvula
Sp6g28740 Schrenkiella parvula
TAR365G0180 Trochodendron aralioides
TAR622G1345 Trochodendron aralioides
TAR623G0149 Trochodendron aralioides
TAR623G1659 Trochodendron aralioides
TAR629G1050 Trochodendron aralioides
THA.LOC104802959 Tarenaya hassleriana
THA.LOC104821018 Tarenaya hassleriana
THA.LOC104824410 Tarenaya hassleriana
Thecc.04G086600 Theobroma cacao
Thecc.05G138900 Theobroma cacao
Thecc.06G096500 Theobroma cacao
Thecc.06G096600 Theobroma cacao
Thhalv10005955m.g Eutrema salsugineum
Thhalv10013649m.g Eutrema salsugineum
Thhalv10015332m.g Eutrema salsugineum
Thhalv10020394m.g Eutrema salsugineum
TPR.G24891 Trifolium pratense
TPR.G33603 Trifolium pratense
TPR.G8810 Trifolium pratense
TWI53G0748 Tripterygium wilfordii
TWI60G1242 Tripterygium wilfordii
TWI77G0683 Tripterygium wilfordii
vmacro07810 Vaccinium macrocarpon
vmacro18181 Vaccinium macrocarpon
VMungo1383G2111 Vigna mungo
VMungo1383G2598 Vigna mungo
Zm00001eb018300 Zea mays
Zm00001eb048610 Zea mays
Zm00001eb048620 Zea mays
Zm00001eb375190 Zea mays
Zm00001eb392050 Zea mays

User provided reference genes

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