Gene: COL.COLO4_10343

General Information

Structural Information

  • Species Corchorus olitorius
  • Gene Identifier COL.COLO4_10343
  • Transcript Identifier COL.rna9138
  • Gene Type Coding gene
  • Location AWUE01014479.1 : 16089-20317 : positive

Gene Family Information

  • ID HOM05D001730
  • #Genes/#Species 374/99
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid rna9138
  • GenBank OMP03550.1
  • id gene10315
  • gene_name COLO4_10343
  • uniprot A0A1R3K8X3

Descriptions

  • Description Cys/Met metabolism, pyridoxal phosphate-dependent enzyme
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009086
IEA
GOA Databasemethionine biosynthetic process
GO:0009086
IEA
InterPromethionine biosynthetic process
GO:0019346
IEA
GOA Databasetranssulfuration
GO:0019346
IEA
InterProtranssulfuration
GO:0001887
ISO
PLAZA Integrative Orthologyselenium compound metabolic process AT3G01120
GO:0019279
ISO
PLAZA Integrative OrthologyL-methionine biosynthetic process from L-homoserine via cystathionine AT3G57050

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003962
IEA
GOA Databasecystathionine gamma-synthase activity
GO:0003962
IEA
InterProcystathionine gamma-synthase activity
GO:0003824
IEA
GOA Databasecatalytic activity
GO:0003824
IEA
InterProcatalytic activity
GO:0030170
IEA
GOA Databasepyridoxal phosphate binding
GO:0030170
IEA
InterPropyridoxal phosphate binding
GO:0004121
ISO
PLAZA Integrative Orthologycystathionine beta-lyase activity AT3G57050

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009570
ISO
PLAZA Integrative Orthologychloroplast stroma AT3G57050
GO:0009507
ISO
PLAZA Integrative Orthologychloroplast AT3G57050

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme
IPR044639 Cystathionine gamma-synthase 1/2
IPR015422 Pyridoxal phosphate-dependent transferase, small domain
IPR015421 Pyridoxal phosphate-dependent transferase, major domain
IPR015424 Pyridoxal phosphate-dependent transferase
Mapman id Description
4.1.2.2.6.1.1 Amino acid metabolism.biosynthesis.aspartate family.aspartate-derived amino acids.methionine.transsulfuration pathway.cystathionine gamma-synthase