Gene: Sopen10g030350

General Information

Structural Information

  • Species Solanum pennellii
  • Gene Identifier Sopen10g030350
  • Transcript Identifier Sopen10g030350.1
  • Gene Type Coding gene
  • Location Spenn-ch10 : 78035789-78042308 : negative

Gene Family Information

  • ID HOM05D001730
  • #Genes/#Species 374/99
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Sopen10g030350.1

Descriptions

  • Description Encodes second enzyme in the methionine biosynthetic pathway | cystathionine beta-lyase (CBL) | FUNCTIONS IN: cystathionine beta-lyase activity | INVOLVED IN: L-methionine biosynthetic process from L-homoserine via cystathionine | LOCATED IN: chloroplast | EXPRESSED IN: 23 plant structures | EXPRESSED DURING: 13 growth stages | CONTAINS InterPro DOMAIN/s: Pyridoxal phosphate-dependent transferase, major domain , Cys/Met metabolism, pyridoxal phosphate-dependent enzyme , Cystathionine beta-lyase, eukaryotic , Pyridoxal phosphate-dependent transferase, major region, subdomain 1 , Pyridoxal phosphate-dependent transferase, major region, subdomain 2 | BEST Arabidopsis thaliana protein match is: Pyridoxal phosphate (PLP)-dependent transferases superfamily protein
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0019346
IEA
InterProtranssulfuration
GO:0071266
IEA
InterPro'de novo' L-methionine biosynthetic process
GO:0009086
ISO
PLAZA Integrative Orthologymethionine biosynthetic process Solyc10g079720.2
GO:0019279
ISO
PLAZA Integrative OrthologyL-methionine biosynthetic process from L-homoserine via cystathionine AT3G57050
GO:0009414
ISO
PLAZA Integrative Orthologyresponse to water deprivation Solyc10g079720.2

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003824
IEA
InterProcatalytic activity
GO:0030170
IEA
InterPropyridoxal phosphate binding
GO:0004121
IEA
InterProcystathionine beta-lyase activity
GO:0003962
ISO
PLAZA Homology (enrichment)cystathionine gamma-synthase activity HOM05D001730

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009570
ISO
PLAZA Integrative Orthologychloroplast stroma AT3G57050
GO:0009507
ISO
PLAZA Integrative Orthologychloroplast AT3G57050

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR015422 Pyridoxal phosphate-dependent transferase, small domain
IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme
IPR006238 Cystathionine beta-lyase, eukaryotic
IPR015424 Pyridoxal phosphate-dependent transferase
IPR015421 Pyridoxal phosphate-dependent transferase, major domain
Mapman id Description
4.1.2.2.6.1.2 Amino acid metabolism.biosynthesis.aspartate family.aspartate-derived amino acids.methionine.transsulfuration pathway.cystathionine beta-lyase