Gene: TPR.G33603
General Information
Structural Information
- Species Trifolium pratense
- Gene Identifier TPR.G33603
- Transcript Identifier TPR.T34736
- Gene Type Coding gene
- Location Tp57577_TGAC_v2_LG6 : 21020274-21024349 : positive
Gene Family Information
- ID HOM05D001730
- #Genes/#Species 374/99
- Phylogenetic origin
- ID ORTHO05D004519
- #Genes/#Species 178/99
- Phylogenetic origin
Gene Duplication Information
- Block Duplication Block duplicate
Labels
Identifiers
- tid Tp57577_TGAC_v2_mRNA34736.v2
- id Tp57577_TGAC_v2_gene33603.v2
- pacid 35974015
Descriptions
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0019346 | IEA | InterPro | transsulfuration | |
| GO:0009086 | IEA | InterPro | methionine biosynthetic process | |
| GO:0001887 | ISO | PLAZA Integrative Orthology | selenium compound metabolic process | AT3G01120 |
| GO:0019279 | ISO | PLAZA Integrative Orthology | L-methionine biosynthetic process from L-homoserine via cystathionine | AT3G57050 |
| GO:0009414 | ISO | PLAZA Integrative Orthology | response to water deprivation | Solyc10g079720.2 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0030170 | IEA | InterPro | pyridoxal phosphate binding | |
| GO:0003824 | IEA | InterPro | catalytic activity | |
| GO:0003962 | IEA | InterPro | cystathionine gamma-synthase activity | |
| GO:0004121 | ISO | PLAZA Integrative Orthology | cystathionine beta-lyase activity | AT3G57050 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0009570 | ISO | PLAZA Integrative Orthology | chloroplast stroma | AT3G57050 |
| GO:0009507 | ISO | PLAZA Integrative Orthology | chloroplast | AT3G57050 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR000277 | Cys/Met metabolism, pyridoxal phosphate-dependent enzyme |
| IPR015421 | Pyridoxal phosphate-dependent transferase, major domain |
| IPR015422 | Pyridoxal phosphate-dependent transferase, small domain |
| IPR015424 | Pyridoxal phosphate-dependent transferase |
| IPR044639 | Cystathionine gamma-synthase 1/2 |
| Mapman id | Description |
|---|---|
| 4.1.2.2.6.1.1 | Amino acid metabolism.biosynthesis.aspartate family.aspartate-derived amino acids.methionine.transsulfuration pathway.cystathionine gamma-synthase |