Gene: Nitab4.5_0002208g0110
General Information
Structural Information
- Species Nicotiana tabacum
- Gene Identifier Nitab4.5_0002208g0110
- Transcript Identifier Nitab4.5_0002208g0110.1
- Gene Type Coding gene
- Location Nitab4.5_0002208 : 359973-365227 : negative
Gene Family Information
- ID HOM05D001730
- #Genes/#Species 374/99
- Phylogenetic origin
- ID ORTHO05D005730
- #Genes/#Species 153/93
- Phylogenetic origin
Gene Duplication Information
- Block Duplication Block duplicate
Labels
Identifiers
- tid Nitab4.5_0002208g0110.1
- SR1-identifier Nta16g26330.1
Descriptions
- Description Pyridoxal phosphate-dependent transferase, major region, subdomain 1, Pyridoxal phosphate-dependent transferase, major region, subdomain 2, Cys/Met metabolism, pyridoxal phosphate-dependent enzyme, Cystathionine beta-lyase, eukaryotic, Pyridoxal phosphate-dependent transferase
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0019346 | IEA | InterPro | transsulfuration | |
| GO:0071266 | IEA | InterPro | 'de novo' L-methionine biosynthetic process | |
| GO:0009086 | ISO | PLAZA Homology (enrichment) | methionine biosynthetic process | HOM05D001730 |
| GO:0019279 | ISO | PLAZA Integrative Orthology | L-methionine biosynthetic process from L-homoserine via cystathionine | AT3G57050 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0003824 | IEA | InterPro | catalytic activity | |
| GO:0030170 | IEA | InterPro | pyridoxal phosphate binding | |
| GO:0004121 | IEA | InterPro | cystathionine beta-lyase activity | |
| GO:0003962 | ISO | PLAZA Homology (enrichment) | cystathionine gamma-synthase activity | HOM05D001730 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0009570 | ISO | PLAZA Integrative Orthology | chloroplast stroma | AT3G57050 |
| GO:0009507 | ISO | PLAZA Integrative Orthology | chloroplast | AT3G57050 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR015422 | Pyridoxal phosphate-dependent transferase, small domain |
| IPR015421 | Pyridoxal phosphate-dependent transferase, major domain |
| IPR000277 | Cys/Met metabolism, pyridoxal phosphate-dependent enzyme |
| IPR015424 | Pyridoxal phosphate-dependent transferase |
| IPR006238 | Cystathionine beta-lyase, eukaryotic |
| Mapman id | Description |
|---|---|
| 4.1.2.2.6.1.2 | Amino acid metabolism.biosynthesis.aspartate family.aspartate-derived amino acids.methionine.transsulfuration pathway.cystathionine beta-lyase |