Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A01p21460 Brassica napus
A06p04190 Brassica napus
A06p07420 Brassica napus
A08p04430 Brassica napus
Aa31LG10G4800 Aethionema arabicum
Aa31LG10G6000 Aethionema arabicum
Aa31LG1G4300 Aethionema arabicum
Aa31LG5G8520 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_369.469 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_369.470__471 Anthoceros agrestis
Actinidia01704 Actinidia chinensis
Actinidia08164 Actinidia chinensis
Actinidia15586 Actinidia chinensis
Actinidia18926 Actinidia chinensis
Actinidia35093 Actinidia chinensis
Actinidia40355 Actinidia chinensis
Ah.02g114980 Amaranthus hybridus
Ah.04g154890 Amaranthus hybridus
AL1G21450 Arabidopsis lyrata
AL1G55510 Arabidopsis lyrata
AL7G39000 Arabidopsis lyrata
Aqoxy2G02798 Aquilegia oxysepala
Aqoxy3G00256 Aquilegia oxysepala
Aqoxy3G02954 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.0BB5XM Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.4JWU9M Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.5345PX Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.7EDN8J Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.7GLL8J Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.H36URW Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.H5PABG Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.HL6MYD Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.HMSN20 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.QWM1BH Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.U37EF8 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.UN718F Arachis hypogaea
AT1G10600 Arabidopsis thaliana
AT1G48790 Arabidopsis thaliana
AT4G16144 Arabidopsis thaliana
ATR0706G159 Amborella trichopoda
ATR0730G168 Amborella trichopoda
ATR1125G122 Amborella trichopoda
Atru.chr11.2036 Acer truncatum
Atru.chr4.2963 Acer truncatum
Atru.chr9.866 Acer truncatum
Atru.chr9.867 Acer truncatum
AUR62005385 Chenopodium quinoa
AUR62014047 Chenopodium quinoa
AUR62016147 Chenopodium quinoa
AUR62029893 Chenopodium quinoa
AUR62033813 Chenopodium quinoa
AUR62035063 Chenopodium quinoa
AUR62042949 Chenopodium quinoa
AUR62043576 Chenopodium quinoa
BcaB04g17385 Brassica carinata
BcaB07g33717 Brassica carinata
BcaC05g24858 Brassica carinata
BcaC05g24949 Brassica carinata
BcaC06g32988 Brassica carinata
BcaC06g33463 Brassica carinata
BcaC06g33466 Brassica carinata
BcaC07g37103 Brassica carinata
BcaC08g43080 Brassica carinata
BcaC09g50306 Brassica carinata
BcaC09g50307 Brassica carinata
BcaNung00222 Brassica carinata
BolC1t02624H Brassica oleracea
BolC5t29640H Brassica oleracea
BolC6t35479H Brassica oleracea
BolC7t45292H Brassica oleracea
BolC8t47273H Brassica oleracea
BraA01t02050Z Brassica rapa
BraA01t02051Z Brassica rapa
BraA03t14059Z Brassica rapa
BraA06t23624Z Brassica rapa
BraA06t23946Z Brassica rapa
BraA08t32470Z Brassica rapa
C01p26800 Brassica napus
C05p08920 Brassica napus
C06p03390 Brassica napus
C08p04720 Brassica napus
CAN.G1425.19 Capsicum annuum
CAN.G1646.19 Capsicum annuum
CAN.G197.19 Capsicum annuum
CANSAT01G2164 Cannabis sativa
CARHR038760 Cardamine hirsuta
CARHR222450 Cardamine hirsuta
Carub.0001s1007 Capsella rubella
Carub.0001s3794 Capsella rubella
Carub.0007s2544 Capsella rubella
Ca_13994_v3 Cicer arietinum L.
Ca_17311_v3 Cicer arietinum L.
Ca_21458_v3 Cicer arietinum L.
Ca_25483_v3 Cicer arietinum L.
Ca_29724_v3 Cicer arietinum L.
Cc03_g01130 Coffea canephora
Cc04_g07040 Coffea canephora
Cc11_g15220 Coffea canephora
CDE02G0485 Ceratophyllum demersum
CDE05G0898 Ceratophyllum demersum
CDE05G0925 Ceratophyllum demersum
CDE08G0034 Ceratophyllum demersum
CDE08G0660 Ceratophyllum demersum
CDE11G1190 Ceratophyllum demersum
Cfa009150 Carpinus fangiana
Cfa015482 Carpinus fangiana
Cfa019752 Carpinus fangiana
Ciclev10004794m.g Citrus clementina
Ciclev10019782m.g Citrus clementina
Ciclev10032455m.g Citrus clementina
CiPaw.01G141800 Carya illinoinensis
CiPaw.02G076600 Carya illinoinensis
CiPaw.05G151500 Carya illinoinensis
CiPaw.15G131900 Carya illinoinensis
ClCG04G011040 Citrullus lanatus
ClCG04G011050 Citrullus lanatus
ClCG06G004740 Citrullus lanatus
COL.COLO4_04902 Corchorus olitorius
COL.COLO4_34663 Corchorus olitorius
Cpa.g.sc3.491 Carica papaya
Cpa.g.sc3.492 Carica papaya
Cpa.g.sc69.46 Carica papaya
Cpa.g.sc9.94 Carica papaya
Cre01.g024300 Chlamydomonas reinhardtii
CsaV3_1G006690 Cucumis sativus L.
CsaV3_6G022520 Cucumis sativus L.
CsaV3_6G022530 Cucumis sativus L.
CSS0013147 Camellia sinensis var. sinensis
CSS0021307 Camellia sinensis var. sinensis
CSS0046459 Camellia sinensis var. sinensis
CSS0047620 Camellia sinensis var. sinensis
CSS0047998 Camellia sinensis var. sinensis
DCAR_023210 Daucus carota
DCAR_030481 Daucus carota
DCAR_031105 Daucus carota
Dinv02078 Davidia involucrata
Dinv15288 Davidia involucrata
Dinv15694 Davidia involucrata
Dinv28120 Davidia involucrata
Dinv44315 Davidia involucrata
Duzib052G0940 Durio zibethinus
Duzib068G1410 Durio zibethinus
Duzib084G0374 Durio zibethinus
Duzib151G1064 Durio zibethinus
Duzib205G0051 Durio zibethinus
Duzib251G0017 Durio zibethinus
Duzib268G0492 Durio zibethinus
ECA232G0992 Erigeron canadensis
ECA246G1757 Erigeron canadensis
EL10Ac2g02968 Beta vulgaris
EL10Ac3g04923 Beta vulgaris
EL10Ac5g11464 Beta vulgaris
EL10Ac6g13678 Beta vulgaris
EL10Ac6g14662 Beta vulgaris
Eucgr.B00736 Eucalyptus grandis
Eucgr.B00739 Eucalyptus grandis
Eucgr.B03319 Eucalyptus grandis
Eucgr.H04029 Eucalyptus grandis
FAN04G3249 Fragaria x ananassa
FAN07G0371 Fragaria x ananassa
FAN07G0820 Fragaria x ananassa
FAN08G0205 Fragaria x ananassa
FAN12G0297 Fragaria x ananassa
FAN12G1650 Fragaria x ananassa
FAN12G1942 Fragaria x ananassa
FAN12G4322 Fragaria x ananassa
FAN13G1855 Fragaria x ananassa
FAN17G2622 Fragaria x ananassa
FAN18G0529 Fragaria x ananassa
FAN18G0659 Fragaria x ananassa
FAN22G1542 Fragaria x ananassa
FAN22G1955 Fragaria x ananassa
FvH4_4g19320 Fragaria vesca
FvH4_4g34380 Fragaria vesca
FvH4_5g11880 Fragaria vesca
Glyma.01G030400 Glycine max
Glyma.02G035100 Glycine max
Glyma.02G158000 Glycine max
Glyma.05G237800 Glycine max
Glyma.07G093100 Glycine max
Glyma.07G242500 Glycine max
Glyma.08G044900 Glycine max
Glyma.09G183100 Glycine max
Glyma.17G031700 Glycine max
Gohir.A03G139200 Gossypium hirsutum
Gohir.A09G064600 Gossypium hirsutum
Gohir.A09G176700 Gossypium hirsutum
Gohir.A10G168200 Gossypium hirsutum
Gohir.A11G005200 Gossypium hirsutum
Gohir.D02G162100 Gossypium hirsutum
Gohir.D09G063400 Gossypium hirsutum
Gohir.D09G172300 Gossypium hirsutum
Gohir.D10G174300 Gossypium hirsutum
Gohir.D11G004500 Gossypium hirsutum
Gorai.005G182100 Gossypium raimondii
Gorai.006G078500 Gossypium raimondii
Gorai.006G194200 Gossypium raimondii
Gorai.007G005500 Gossypium raimondii
Gorai.011G195000 Gossypium raimondii
GSVIVG01008310001 Vitis vinifera
GSVIVG01008314001 Vitis vinifera
GSVIVG01013737001 Vitis vinifera
GSVIVG01035040001 Vitis vinifera
HanXRQChr12g0354231 Helianthus annuus
HanXRQChr12g0383511 Helianthus annuus
HanXRQChr17g0552091 Helianthus annuus
Haze_01083 Corylus avellana
Haze_12184 Corylus avellana
Haze_18699 Corylus avellana
Hma1.2p1_0013F.1_g008900 Hydrangea macrophylla
Hma1.2p1_0399F.1_g143980 Hydrangea macrophylla
Hma1.2p1_0536F.1_g174010 Hydrangea macrophylla
Hma1.2p1_0653F.1_g196180 Hydrangea macrophylla
HPP92_004802 Vanilla planifolia
HPP92_017240 Vanilla planifolia
HPP92_026099 Vanilla planifolia
HPP92_027568 Vanilla planifolia
Hund02382 Selenicereus undatus
Hund02956 Selenicereus undatus
Hund03098 Selenicereus undatus
Hund25354 Selenicereus undatus
Lalb_Chr05g0216871 Lupinus albus
Lalb_Chr05g0222421 Lupinus albus
Lalb_Chr07g0182151 Lupinus albus
Lalb_Chr07g0182161 Lupinus albus
Lalb_Chr12g0200971 Lupinus albus
Lj2g0009923 Lotus japonicus
Lj2g0010503 Lotus japonicus
Lj3A1053T39 Lonicera japonica
Lj3A827G68 Lonicera japonica
Lj4g0024053 Lotus japonicus
Lj5C150G9 Lonicera japonica
Lj9A425G47 Lonicera japonica
Lsat_1_v5_gn_1_44040 Lactuca sativa
Lsat_1_v5_gn_4_5661 Lactuca sativa
Lsat_1_v5_gn_5_53700 Lactuca sativa
Lsat_1_v5_gn_8_144760 Lactuca sativa
Manes.03G201800 Manihot esculenta
Manes.05G114700 Manihot esculenta
Manes.12G028300 Manihot esculenta
Manes.15G006500 Manihot esculenta
Mapoly0179s0015 Marchantia polymorpha
MBI09_g35837_MAGBIO Magnolia biondii
MBI16_g05564_MAGBIO Magnolia biondii
MBI18_g09590_MAGBIO Magnolia biondii
MBI18_g28464_MAGBIO Magnolia biondii
MBI18_g34963_MAGBIO Magnolia biondii
MBI19_g18111_MAGBIO Magnolia biondii
MBI19_g18112_MAGBIO Magnolia biondii
MBI19_g37504_MAGBIO Magnolia biondii
MBI19_g45472_MAGBIO Magnolia biondii
MD06G1217700 Malus domestica
MD13G1092600 Malus domestica
MD13G1157700 Malus domestica
MD14G1227900 Malus domestica
MD16G1093400 Malus domestica
MD16G1158700 Malus domestica
Medtr4g121470 Medicago truncatula
Medtr5g034240 Medicago truncatula
Medtr6g083940 Medicago truncatula
Medtr6g083950 Medicago truncatula
Medtr8g104310 Medicago truncatula
MELO3C002093.2 Cucumis melo
MELO3C021283.2 Cucumis melo
Migut.E01769 Erythranthe guttata
Migut.G00100 Erythranthe guttata
Migut.G00102 Erythranthe guttata
Migut.N00055 Erythranthe guttata
MSTRG.3870 Avicennia marina
MSTRG.589 Avicennia marina
MSTRG.9565 Avicennia marina
Nitab4.5_0000169g0060 Nicotiana tabacum
Nitab4.5_0000884g0120 Nicotiana tabacum
Nitab4.5_0002906g0090 Nicotiana tabacum
Nitab4.5_0003433g0070 Nicotiana tabacum
Nitab4.5_0005333g0020 Nicotiana tabacum
Nn3g17890 Nelumbo nucifera
Nn3g21641 Nelumbo nucifera
Nn4g22772 Nelumbo nucifera
Nn4g25646 Nelumbo nucifera
Oeu032969.1 Olea europaea
Oeu046563.1 Olea europaea
Os01g0338200 Oryza sativa ssp. japonica
Os01g0499300 Oryza sativa ssp. japonica
Os01g0661500 Oryza sativa ssp. japonica
Peaxi162Scf00065g00324 Petunia axillaris
Peaxi162Scf00683g00022 Petunia axillaris
PGR004G0959 Punica granatum
PGR083G0583 Punica granatum
PGR102G2285 Punica granatum
PGSC0003DMG400005643 Solanum tuberosum
PGSC0003DMG400007555 Solanum tuberosum
PGSC0003DMG402009742 Solanum tuberosum
Phvul.002G071100 Phaseolus vulgaris
Phvul.002G317500 Phaseolus vulgaris
Phvul.003G111000 Phaseolus vulgaris
Phvul.004G156088 Phaseolus vulgaris
Potri.010G041200 Populus trichocarpa
Potri.010G141100 Populus trichocarpa
Potri.015G045800 Populus trichocarpa
Pp3c11_14050 Physcomitrium patens
Pp3c13_4580 Physcomitrium patens
Pp3c17_10020 Physcomitrium patens
Pp3c5_10200 Physcomitrium patens
Pp3c6_16700 Physcomitrium patens
PRCOL_00007236 Prasinoderma coloniale
Prupe.1G125200 Prunus persica
Prupe.1G253200 Prunus persica
Prupe.5G222900 Prunus persica
Psat1g036960 Pisum sativum
Psat2g103120 Pisum sativum
Psat4g023200 Pisum sativum
Psat7g008440 Pisum sativum
PSO017G3250 Papaver somniferum
PSO063G2777 Papaver somniferum
PSO170G2044 Papaver somniferum
PSO210G5422 Papaver somniferum
PSO339G6336 Papaver somniferum
PSO384G1639 Papaver somniferum
PSO478G4193 Papaver somniferum
PSO541G1200 Papaver somniferum
PSO761G0705 Papaver somniferum
PSO832G2672 Papaver somniferum
QL03p060200 Quercus lobata
QL06p011440 Quercus lobata
QL10p025680 Quercus lobata
RcHm_v2.0_Chr4g0424341 Rosa chinensis
RcHm_v2.0_Chr4g0443791 Rosa chinensis
RcHm_v2.0_Chr7g0185701 Rosa chinensis
Rhsim04G0232600 Rhododendron simsii
Rhsim08G0132000 Rhododendron simsii
Rhsim12G0046300 Rhododendron simsii
Sabra10G0026100 Salix brachista
Sabra10G0109100 Salix brachista
Sabra15G0039700 Salix brachista
SalBow1G5116 Salvia bowleyana
SalBow8G1738 Salvia bowleyana
SalBow8G3812 Salvia bowleyana
Sc10g0009360 Simmondsia chinensis
Sc10g0009370 Simmondsia chinensis
Sc10g0009420 Simmondsia chinensis
Sc13g0006310 Simmondsia chinensis
Sc14g0008640 Simmondsia chinensis
Sed0012111 Sechium edule
Sed0021143 Sechium edule
Sed0027940 Sechium edule
SEGI_01432 Sequoiadendron giganteum
SEGI_09744 Sequoiadendron giganteum
SEGI_28241 Sequoiadendron giganteum
SGA_v2.0_scaffold107G30795 Striga asiatica
SGA_v2.0_scaffold18G08385 Striga asiatica
SGA_v2.0_scaffold42G16020 Striga asiatica
SHI00160 Sapria himalayana
SHI00161 Sapria himalayana
SHI07298 Sapria himalayana
SHI15035 Sapria himalayana
SHI15789 Sapria himalayana
SHI19669 Sapria himalayana
SHI19779 Sapria himalayana
SHI20054 Sapria himalayana
SHI20171 Sapria himalayana
SHI20172 Sapria himalayana
SHI24227 Sapria himalayana
SHI31571 Sapria himalayana
SHI31572 Sapria himalayana
SHI31760 Sapria himalayana
SHI32991 Sapria himalayana
SHI32992 Sapria himalayana
SHI33866 Sapria himalayana
SHI33868 Sapria himalayana
SHI34395 Sapria himalayana
SHI34397 Sapria himalayana
SHI34510 Sapria himalayana
SHI34511 Sapria himalayana
SHI34512 Sapria himalayana
SHI35733 Sapria himalayana
SHI35735 Sapria himalayana
SHI35898 Sapria himalayana
SHI36252 Sapria himalayana
SHI36673 Sapria himalayana
SHI37428 Sapria himalayana
SHI37429 Sapria himalayana
SHI37480 Sapria himalayana
SHI43891 Sapria himalayana
SHI46398 Sapria himalayana
SHI47288 Sapria himalayana
SHI47949 Sapria himalayana
SHI48680 Sapria himalayana
SHI49084 Sapria himalayana
SHI52608 Sapria himalayana
SHI53446 Sapria himalayana
SHI53785 Sapria himalayana
SHI53801 Sapria himalayana
SHI53984 Sapria himalayana
SHI54312 Sapria himalayana
SHI54389 Sapria himalayana
SHI54459 Sapria himalayana
SHI54643 Sapria himalayana
SHI54797 Sapria himalayana
SHI54913 Sapria himalayana
SHI55006 Sapria himalayana
SHI55132 Sapria himalayana
SHI55156 Sapria himalayana
SMO010G0022 Selaginella moellendorffii
SMO328G0038 Selaginella moellendorffii
SMO356G0165 Selaginella moellendorffii
Solyc01g060280.4 Solanum lycopersicum
Solyc03g119330.3 Solanum lycopersicum
Sopen01g026500 Solanum pennellii
Sopen03g038200 Solanum pennellii
Sp1g09280 Schrenkiella parvula
Sp1g35710 Schrenkiella parvula
Sp7g14630 Schrenkiella parvula
TAR362G0524 Trochodendron aralioides
TAR374G1228 Trochodendron aralioides
TAR374G1335 Trochodendron aralioides
THA.LOC104820389 Tarenaya hassleriana
THA.LOC104821797 Tarenaya hassleriana
THA.LOC104823645 Tarenaya hassleriana
Thecc.02G250800 Theobroma cacao
Thecc.03G037300 Theobroma cacao
Thecc.04G295800 Theobroma cacao
Thhalv10008718m.g Eutrema salsugineum
Thhalv10011406m.g Eutrema salsugineum
Thhalv10025009m.g Eutrema salsugineum
TPR.G15170 Trifolium pratense
TPR.G16832 Trifolium pratense
TPR.G21089 Trifolium pratense
TPR.G25945 Trifolium pratense
TPR.G30967 Trifolium pratense
TPR.G32672 Trifolium pratense
TWI36G0674 Tripterygium wilfordii
TWI53G0938 Tripterygium wilfordii
TWI73G0765 Tripterygium wilfordii
TWI81G0493 Tripterygium wilfordii
unitig_21.g20426 Utricularia gibba
unitig_32.g10636 Utricularia gibba
vmacro01169 Vaccinium macrocarpon
vmacro08073 Vaccinium macrocarpon
vmacro17707 Vaccinium macrocarpon
VMungo0251G0016 Vigna mungo
VMungo0464G1324 Vigna mungo
VMungo1215G1129 Vigna mungo
VMungo1215G3354 Vigna mungo
Zm00001eb131320 Zea mays
Zm00001eb340870 Zea mays
Zm00001eb341740 Zea mays
Zm00001eb359600 Zea mays

User provided reference genes

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