Gene: Solyc01g060280.4

General Information

Structural Information

  • Species Solanum lycopersicum
  • Gene Identifier Solyc01g060280.4
  • Transcript Identifier Solyc01g060280.4.1
  • Gene Type Coding gene
  • Location SL4.0ch01 : 63188135-63191037 : positive

Gene Family Information

  • ID HOM05D001397
  • #Genes/#Species 448/98
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Solyc01g060280.4.1
  • uniprot A0A3Q7EYJ7
  • gene_id Solyc01g060280

Descriptions

  • Description AMSH-like ubiquitin thioesterase 1 (AHRD V3.3 *** A0A2G2XPY5_CAPBA)
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0019941
ISO
PLAZA Integrative Orthologymodification-dependent protein catabolic process AT4G16144
GO:0044090
ISO
PLAZA Integrative Orthologypositive regulation of vacuole organization AT4G16144
GO:0006897
ISO
PLAZA Integrative Orthologyendocytosis AT4G16144
GO:0000338
ISO
PLAZA Integrative Orthologyprotein deneddylation AT4G16144
GO:0046907
ISO
PLAZA Integrative Orthologyintracellular transport AT4G16144
GO:0016926
ISO
PLAZA Integrative Orthologyprotein desumoylation AT4G16144
GO:0007033
ISO
PLAZA Integrative Orthologyvacuole organization AT4G16144
GO:0090316
ISO
PLAZA Integrative Orthologypositive regulation of intracellular protein transport AT4G16144
GO:0071108
IBA
GOA Databaseprotein K48-linked deubiquitination
GO:0070536
IBA
IEA
GOA Databaseprotein K63-linked deubiquitination
GO:0070536
IEA
InterProprotein K63-linked deubiquitination
GO:0016579
IEA
GOA Databaseprotein deubiquitination
GO:0016579
IEA
InterProprotein deubiquitination

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0004843
IBA
GOA Databasethiol-dependent deubiquitinase
GO:0005515
IEA
InterProprotein binding
GO:0008237
IEA
GOA Databasemetallopeptidase activity
GO:0008237
IEA
InterPrometallopeptidase activity
GO:0061578
IEA
GOA DatabaseLys63-specific deubiquitinase activity
GO:0061578
IEA
InterProLys63-specific deubiquitinase activity
GO:0070122
IEA
GOA Databaseisopeptidase activity
GO:0070122
IEA
InterProisopeptidase activity

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005768
IBA
GOA Databaseendosome
GO:0016021
ISO
PLAZA Integrative Orthologyintegral component of membrane AT4G16144
GO:0005770
ISO
PLAZA Integrative Orthologylate endosome AT4G16144
GO:0005737
ISO
PLAZA Integrative Orthologycytoplasm AT4G16144
GO:0016020
IBA
GOA Databasemembrane

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR000555 JAB1/MPN/MOV34 metalloenzyme domain
IPR044098 STAMBP/STALP-like, MPN domain
Mapman id Description
22.4.3.2.1 Vesicle trafficking.endocytic trafficking.ubiquitylated cargo adaptation.cargo deubiquitination.deubiquitinase (AMSH)