Gene: TPR.G16832

General Information

Structural Information

  • Species Trifolium pratense
  • Gene Identifier TPR.G16832
  • Transcript Identifier TPR.T17415
  • Gene Type Coding gene
  • Location Tp57577_TGAC_v2_LG4 : 13297515-13303177 : positive

Gene Family Information

  • ID HOM05D001397
  • #Genes/#Species 448/98
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Tp57577_TGAC_v2_mRNA17415.v2
  • id Tp57577_TGAC_v2_gene16832.v2
  • pacid 35963654

Descriptions

  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0000338
ISO
PLAZA Integrative Orthologyprotein deneddylation AT4G16144
GO:0071108
ISO
PLAZA Integrative Orthologyprotein K48-linked deubiquitination AT4G16144
GO:0070536
ISO
PLAZA Integrative Orthologyprotein K63-linked deubiquitination AT4G16144
GO:0019941
ISO
PLAZA Integrative Orthologymodification-dependent protein catabolic process AT4G16144
GO:0044090
ISO
PLAZA Integrative Orthologypositive regulation of vacuole organization AT4G16144
GO:0006897
ISO
PLAZA Integrative Orthologyendocytosis AT4G16144
GO:0046907
ISO
PLAZA Integrative Orthologyintracellular transport AT4G16144
GO:0016926
ISO
PLAZA Integrative Orthologyprotein desumoylation AT4G16144
GO:0007033
ISO
PLAZA Integrative Orthologyvacuole organization AT4G16144
GO:0090316
ISO
PLAZA Integrative Orthologypositive regulation of intracellular protein transport AT4G16144
GO:0016579
ISO
PLAZA Homology (enrichment)protein deubiquitination HOM05D001397

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0061578
ISO
PLAZA Homology (enrichment)Lys63-specific deubiquitinase activity HOM05D001397
GO:0005515
IEA
InterProprotein binding
GO:0070122
IEA
InterProisopeptidase activity
GO:0008237
IEA
InterPrometallopeptidase activity

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0016021
ISO
PLAZA Integrative Orthologyintegral component of membrane AT4G16144
GO:0016020
ISO
PLAZA Integrative Orthologymembrane AT4G16144
GO:0005737
ISO
PLAZA Integrative Orthologycytoplasm AT4G16144
GO:0005770
ISO
PLAZA Integrative Orthologylate endosome AT4G16144

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR015063 USP8 dimerisation domain
IPR000555 JAB1/MPN/MOV34 metalloenzyme domain
Mapman id Description
22.4.3.2.1 Vesicle trafficking.endocytic trafficking.ubiquitylated cargo adaptation.cargo deubiquitination.deubiquitinase (AMSH)