Gene: AT1G10600

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT1G10600
  • Transcript Identifier AT1G10600.4
  • Gene Type Coding gene
  • Location Chr1 : 3503765-3505190 : positive

Gene Family Information

  • ID HOM05D001397
  • #Genes/#Species 448/98
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT1G10600.4
  • symbol AMSH2
  • uniprot Q6NKP9

Descriptions

  • Description associated molecule with the SH3 domain of STAM 2
  • Computational description associated molecule with the SH3 domain of STAM 2 (AMSH2); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: ubiquitin-dependent protein catabolic process; LOCATED IN: chloroplast; EXPRESSED IN: cultured cell; CONTAINS InterPro DOMAIN/s: Mov34/MPN/PAD-1 (InterPro:IPR000555); BEST Arabidopsis thaliana protein match is: associated molecule with the SH3 domain of STAM 3 (TAIR:AT4G16144.1); Has 1093 Blast hits to 1091 proteins in 231 species: Archae - 0; Bacteria - 0; Metazoa - 401; Fungi - 313; Plants - 274; Viruses - 0; Other Eukaryotes - 105 (source: NCBI BLink).
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0070536
IEA
GOA Databaseprotein K63-linked deubiquitination
GO:0070536
ISS, IBA
Gene Ontologyprotein K63-linked deubiquitination1
GO:0070536
IEA
InterProprotein K63-linked deubiquitination
GO:0016579
IEA
GOA Databaseprotein deubiquitination
GO:0016579
IEA
InterProprotein deubiquitination
GO:0006508
IEA
GOA Databaseproteolysis
GO:0071108
ISS
Gene Ontologyprotein K48-linked deubiquitination

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0046872
IEA
GOA Databasemetal ion binding
GO:0061578
IEA
Gene OntologyLys63-specific deubiquitinase activity
GO:0061578
IEA
InterProLys63-specific deubiquitinase activity
GO:0070122
IEA
Gene Ontologyisopeptidase activity
GO:0070122
IEA
InterProisopeptidase activity
GO:0008237
IEA
GOA Databasemetallopeptidase activity
GO:0008237
IEA
InterPrometallopeptidase activity
GO:0005515
IEA
InterProprotein binding
GO:0008233
IEA
GOA Databasepeptidase activity
GO:0016787
IEA
GOA Databasehydrolase activity
GO:0004843
IBA
Gene Ontologythiol-dependent deubiquitinase1

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
ISM
Gene Ontologynucleus
GO:0016020
IBA
Gene Ontologymembrane1
GO:0005768
IBA
Gene Ontologyendosome1
GO:0005739
ISM
Gene Ontologymitochondrion

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR000555 JAB1/MPN/MOV34 metalloenzyme domain
IPR044098 STAMBP/STALP-like, MPN domain
Mapman id Description
22.4.3.2.1 Vesicle trafficking.endocytic trafficking.ubiquitylated cargo adaptation.cargo deubiquitination.deubiquitinase (AMSH)