Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A02p36500 Brassica napus
A02p38500 Brassica napus
A03p37840 Brassica napus
A05p36640 Brassica napus
A06p37730 Brassica napus
A09p05140 Brassica napus
Aa31LG10G140 Aethionema arabicum
Aa31LG11G8870 Aethionema arabicum
Aa31LG5G15380 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_117.800 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_362.2478 Anthoceros agrestis
Actinidia05751 Actinidia chinensis
Actinidia08862 Actinidia chinensis
Actinidia15831 Actinidia chinensis
Actinidia25592 Actinidia chinensis
Actinidia27673 Actinidia chinensis
Actinidia27674 Actinidia chinensis
Actinidia30911 Actinidia chinensis
Actinidia30912 Actinidia chinensis
Actinidia33828 Actinidia chinensis
Actinidia33829 Actinidia chinensis
Ah.02g115290 Amaranthus hybridus
Ah.02g117520 Amaranthus hybridus
Ah.06g192840 Amaranthus hybridus
Ah.09g231900 Amaranthus hybridus
Ah.11g044870 Amaranthus hybridus
AL1G64380 Arabidopsis lyrata
AL3G15450 Arabidopsis lyrata
AL3G24530 Arabidopsis lyrata
AL6G40030 Arabidopsis lyrata
AL6G40050 Arabidopsis lyrata
AL7G48810 Arabidopsis lyrata
AL7G49140 Arabidopsis lyrata
Aqoxy2G03112 Aquilegia oxysepala
Aqoxy3G02028 Aquilegia oxysepala
Aqoxy5G00645 Aquilegia oxysepala
Aqoxy5G03467 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.0BY36D Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.1D22H7 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.45I9WG Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.96UIHW Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.T2LSLY Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.W1WWEB Arachis hypogaea
AT1G56110 Arabidopsis thaliana
AT3G05060 Arabidopsis thaliana
AT3G12860 Arabidopsis thaliana
AT5G27120 Arabidopsis thaliana
AT5G27140 Arabidopsis thaliana
ATR0665G227 Amborella trichopoda
ATR0686G022 Amborella trichopoda
Atru.chr1.4168 Acer truncatum
Atru.chr9.1089 Acer truncatum
AUR62000941 Chenopodium quinoa
AUR62005001 Chenopodium quinoa
AUR62005026 Chenopodium quinoa
AUR62012809 Chenopodium quinoa
AUR62021844 Chenopodium quinoa
AUR62025915 Chenopodium quinoa
AUR62029640 Chenopodium quinoa
BcaB04g16920 Brassica carinata
BcaB04g18733 Brassica carinata
BcaB04g19651 Brassica carinata
BcaB04g21172 Brassica carinata
BcaB05g24466 Brassica carinata
BcaB06g25506 Brassica carinata
BcaB07g30088 Brassica carinata
BcaB07g33166 Brassica carinata
BcaB07g34189 Brassica carinata
BcaC01g04038 Brassica carinata
BcaC03g17771 Brassica carinata
BcaC04g23700 Brassica carinata
BcaC04g23701 Brassica carinata
BcaC04g23702 Brassica carinata
BcaC04g23703 Brassica carinata
BcaC05g29232 Brassica carinata
BcaC06g34700 Brassica carinata
BcaC08g43679 Brassica carinata
BcaC08g44911 Brassica carinata
BolC2t11602H Brassica oleracea
BolC2t11855H Brassica oleracea
BolC3t16867H Brassica oleracea
BolC3t21638H Brassica oleracea
BolC5t34175H Brassica oleracea
BolC6t37694H Brassica oleracea
BolC7t44585H Brassica oleracea
BolC9t53484H Brassica oleracea
BraA02t08645Z Brassica rapa
BraA02t08828Z Brassica rapa
BraA03t12939Z Brassica rapa
BraA06t26692Z Brassica rapa
BraA08t32066Z Brassica rapa
BraA09t36153Z Brassica rapa
BraSC56t46383Z Brassica rapa
C02p55380 Brassica napus
C02p55460 Brassica napus
C02p57850 Brassica napus
C03p45900 Brassica napus
C05p55070 Brassica napus
C06p10990 Brassica napus
C06p25330 Brassica napus
C07p40500 Brassica napus
C09p05550 Brassica napus
CAN.G1076.18 Capsicum annuum
CAN.G4.12 Capsicum annuum
CAN.G694.10 Capsicum annuum
CAN.G749.29 Capsicum annuum
CAN.G749.30 Capsicum annuum
CANSAT54G0025 Cannabis sativa
CARHR045860 Cardamine hirsuta
CARHR079390 Cardamine hirsuta
CARHR087380 Cardamine hirsuta
CARHR120420 Cardamine hirsuta
CARHR185770 Cardamine hirsuta
CARHR213640 Cardamine hirsuta
CARHR213650 Cardamine hirsuta
Carub.0001s4472 Capsella rubella
Carub.0003s0431 Capsella rubella
Carub.0003s1222 Capsella rubella
Carub.0006s2535 Capsella rubella
Carub.0006s2538 Capsella rubella
Ca_00918_v3 Cicer arietinum L.
Ca_20906_v3 Cicer arietinum L.
Ca_23254_v3 Cicer arietinum L.
CBR_g149 Chara braunii
CBR_g27745 Chara braunii
CBR_g49712 Chara braunii
Cc04_g10000 Coffea canephora
Cc05_g01330 Coffea canephora
Cc07_g18220 Coffea canephora
CDE01G0574 Ceratophyllum demersum
CDE01G0696 Ceratophyllum demersum
CDE04G1039 Ceratophyllum demersum
CDE07G1172 Ceratophyllum demersum
CDE12G0355 Ceratophyllum demersum
Cfa002871 Carpinus fangiana
Cfa018857 Carpinus fangiana
Cfa024470 Carpinus fangiana
Cfa025876 Carpinus fangiana
Ciclev10000758m.g Citrus clementina
Ciclev10019526m.g Citrus clementina
Ciclev10031140m.g Citrus clementina
CiPaw.07G010000 Carya illinoinensis
CiPaw.07G010200 Carya illinoinensis
CiPaw.11G009700 Carya illinoinensis
CiPaw.12G037600 Carya illinoinensis
ClCG02G016300 Citrullus lanatus
ClCG06G017770 Citrullus lanatus
COL.COLO4_13628 Corchorus olitorius
COL.COLO4_28077 Corchorus olitorius
Cpa.g.c28523.1 Carica papaya
Cpa.g.c28523.2 Carica papaya
Cpa.g.c29671.2 Carica papaya
Cpa.g.sc2085.2 Carica papaya
Cre10.g441400 Chlamydomonas reinhardtii
Cre12.g525200 Chlamydomonas reinhardtii
CsaV3_1G000680 Cucumis sativus L.
CsaV3_2G004440 Cucumis sativus L.
CSS0000356 Camellia sinensis var. sinensis
CSS0012516 Camellia sinensis var. sinensis
CSS0017797 Camellia sinensis var. sinensis
CSS0026520 Camellia sinensis var. sinensis
CSS0038009 Camellia sinensis var. sinensis
CSS0048459 Camellia sinensis var. sinensis
DCAR_000310 Daucus carota
DCAR_003150 Daucus carota
DCAR_007801 Daucus carota
DCAR_007811 Daucus carota
DCAR_016408 Daucus carota
DCAR_020403 Daucus carota
DCAR_021613 Daucus carota
DCAR_024987 Daucus carota
Dinv03085 Davidia involucrata
Dinv03355 Davidia involucrata
Dinv04272 Davidia involucrata
Dinv04863 Davidia involucrata
Dinv11152 Davidia involucrata
Duzib068G0731 Durio zibethinus
Duzib128G0087 Durio zibethinus
Duzib177G0757 Durio zibethinus
Duzib205G1332 Durio zibethinus
ECA232G5020 Erigeron canadensis
ECA236G2458 Erigeron canadensis
ECA246G0967 Erigeron canadensis
EL10Ac4g09229 Beta vulgaris
EL10Ac8g19379 Beta vulgaris
EL10As4g23419 Beta vulgaris
Eucgr.H04416 Eucalyptus grandis
Eucgr.K02739 Eucalyptus grandis
FAN02G4374 Fragaria x ananassa
FAN04G2840 Fragaria x ananassa
FAN05G0120 Fragaria x ananassa
FAN05G4463 Fragaria x ananassa
FAN08G1531 Fragaria x ananassa
FAN09G2140 Fragaria x ananassa
FAN09G3633 Fragaria x ananassa
FAN14G1669 Fragaria x ananassa
FvH4_5g07871 Fragaria vesca
FvH4_6g04090 Fragaria vesca
Glyma.05G046400 Glycine max
Glyma.07G102600 Glycine max
Glyma.09G175966 Glycine max
Glyma.11G114300 Glycine max
Glyma.12G040200 Glycine max
Glyma.17G128400 Glycine max
Gohir.A07G052200 Gossypium hirsutum
Gohir.A08G213700 Gossypium hirsutum
Gohir.A11G035800 Gossypium hirsutum
Gohir.A11G257400 Gossypium hirsutum
Gohir.A13G171550 Gossypium hirsutum
Gohir.D07G056700 Gossypium hirsutum
Gohir.D08G230800 Gossypium hirsutum
Gohir.D11G039400 Gossypium hirsutum
Gohir.D11G267300 Gossypium hirsutum
Gohir.D13G177100 Gossypium hirsutum
Gorai.001G060200 Gossypium raimondii
Gorai.004G245100 Gossypium raimondii
Gorai.007G042300 Gossypium raimondii
Gorai.007G287100 Gossypium raimondii
Gorai.013G202500 Gossypium raimondii
GSVIVG01008506001 Vitis vinifera
GSVIVG01017800001 Vitis vinifera
GSVIVG01017802001 Vitis vinifera
GSVIVG01021905001 Vitis vinifera
HanXRQChr02g0043391 Helianthus annuus
HanXRQChr05g0153931 Helianthus annuus
HanXRQChr07g0197841 Helianthus annuus
HanXRQChr09g0273011 Helianthus annuus
HanXRQChr14g0451691 Helianthus annuus
HanXRQChr16g0497801 Helianthus annuus
Haze_07241 Corylus avellana
Haze_25199 Corylus avellana
Haze_26724 Corylus avellana
Haze_27165 Corylus avellana
Hma1.2p1_0014F.1_g009690 Hydrangea macrophylla
HPP92_012282 Vanilla planifolia
HPP92_012290 Vanilla planifolia
HPP92_024996 Vanilla planifolia
Hund02424 Selenicereus undatus
Hund10178 Selenicereus undatus
Hund14661 Selenicereus undatus
Hund22086 Selenicereus undatus
Lalb_Chr01g0002321 Lupinus albus
Lalb_Chr03g0025521 Lupinus albus
Lalb_Chr06g0172261 Lupinus albus
Lalb_Chr07g0183301 Lupinus albus
Lalb_Chr12g0202131 Lupinus albus
Lalb_Chr13g0297371 Lupinus albus
Lalb_Chr19g0138821 Lupinus albus
Lj2g0001549 Lotus japonicus
Lj3g0002735 Lotus japonicus
Lj4g0019980 Lotus japonicus
Lj7A481T49 Lonicera japonica
Lj9A673T47 Lonicera japonica
Lj9A707T56 Lonicera japonica
Lj9C476G21 Lonicera japonica
Lsat_1_v5_gn_1_29280 Lactuca sativa
Lsat_1_v5_gn_1_62020 Lactuca sativa
Lsat_1_v5_gn_2_95881 Lactuca sativa
Lsat_1_v5_gn_3_49721 Lactuca sativa
Lsat_1_v5_gn_4_181800 Lactuca sativa
Lsat_1_v5_gn_4_76561 Lactuca sativa
Manes.06G117900 Manihot esculenta
Manes.08G126100 Manihot esculenta
Manes.09G158900 Manihot esculenta
Manes.14G053300 Manihot esculenta
Manes.14G155400 Manihot esculenta
Mapoly0028s0114 Marchantia polymorpha
Mapoly0069s0034 Marchantia polymorpha
MBI10_g21539_MAGBIO Magnolia biondii
MBI10_g32325_MAGBIO Magnolia biondii
MBI11_g06762_MAGBIO Magnolia biondii
MBI13_g04773_MAGBIO Magnolia biondii
MBI13_g04778_MAGBIO Magnolia biondii
MBI13_g04789_MAGBIO Magnolia biondii
MBI13_g45762_MAGBIO Magnolia biondii
MBI13_g45763_MAGBIO Magnolia biondii
MBI15_g03892_MAGBIO Magnolia biondii
MBI15_g10562_MAGBIO Magnolia biondii
MBI16_g04494_MAGBIO Magnolia biondii
MBI18_g11230_MAGBIO Magnolia biondii
MCO01G709 Micromonas commoda
MCO16G544 Micromonas commoda
MD04G1216600 Malus domestica
MD06G1145200 Malus domestica
MD12G1233200 Malus domestica
MD14G1159900 Malus domestica
Medtr4g070910 Medicago truncatula
Medtr4g103790 Medicago truncatula
Medtr5g010260 Medicago truncatula
Medtr5g010290 Medicago truncatula
Medtr6g069570 Medicago truncatula
MELO3C004350.2 Cucumis melo
MELO3C026228.2 Cucumis melo
Migut.D01257 Erythranthe guttata
Migut.H00753 Erythranthe guttata
Migut.H00754 Erythranthe guttata
Migut.I00515 Erythranthe guttata
MSTRG.9320 Avicennia marina
Nitab4.5_0000155g0130 Nicotiana tabacum
Nitab4.5_0000485g0070 Nicotiana tabacum
Nitab4.5_0001338g0160 Nicotiana tabacum
Nitab4.5_0001498g0030 Nicotiana tabacum
Nitab4.5_0006530g0030 Nicotiana tabacum
Nitab4.5_0013216g0010 Nicotiana tabacum
Nitab4.5_0013308g0010 Nicotiana tabacum
Nn3g16517 Nelumbo nucifera
Nn3g21323 Nelumbo nucifera
Nn4g22384 Nelumbo nucifera
Nn4g25988 Nelumbo nucifera
Nn4g26137 Nelumbo nucifera
Oeu014982.1 Olea europaea
Oeu023478.1 Olea europaea
Oeu045461.1 Olea europaea
Oeu056005.1 Olea europaea
Oeu056137.1 Olea europaea
Oeu064438.1 Olea europaea
Os03g0350100 Oryza sativa ssp. japonica
Os03g0350300 Oryza sativa ssp. japonica
Os03g0352300 Oryza sativa ssp. japonica
Os07g0661800 Oryza sativa ssp. japonica
Peaxi162Scf00071g02312 Petunia axillaris
Peaxi162Scf00673g00440 Petunia axillaris
PGR044G2092 Punica granatum
PGR119G1634 Punica granatum
PGSC0003DMG400002765 Solanum tuberosum
PGSC0003DMG400006104 Solanum tuberosum
PGSC0003DMG400013167 Solanum tuberosum
PGSC0003DMG400017007 Solanum tuberosum
PGSC0003DMG400021315 Solanum tuberosum
PGSC0003DMG400023353 Solanum tuberosum
Phvul.003G209500 Phaseolus vulgaris
Phvul.011G042200 Phaseolus vulgaris
Potri.005G045600 Populus trichocarpa
Potri.012G095400 Populus trichocarpa
Potri.013G032300 Populus trichocarpa
Potri.015G092900 Populus trichocarpa
Pp3c11_14260 Physcomitrium patens
Pp3c16_5220 Physcomitrium patens
Pp3c25_6350 Physcomitrium patens
Pp3c2_28380 Physcomitrium patens
Pp3c7_18900 Physcomitrium patens
PRCOL_00000012 Prasinoderma coloniale
PRCOL_00007065 Prasinoderma coloniale
Prupe.4G191400 Prunus persica
Prupe.5G018800 Prunus persica
Prupe.5G153500 Prunus persica
Prupe.6G336300 Prunus persica
Psat2g182360 Pisum sativum
Psat4g063120 Pisum sativum
Psat7g140200 Pisum sativum
PSO017G5462 Papaver somniferum
PSO063G7389 Papaver somniferum
PSO170G5816 Papaver somniferum
PSO210G4297 Papaver somniferum
PSO210G6000 Papaver somniferum
PSO386G0214 Papaver somniferum
PSO423G0040 Papaver somniferum
PSO423G0294 Papaver somniferum
PSO478G0383 Papaver somniferum
PSO478G0899 Papaver somniferum
PSO782G1109 Papaver somniferum
PSO782G3915 Papaver somniferum
QL03p001096 Quercus lobata
QL10p004371 Quercus lobata
RcHm_v2.0_Chr3g0452641 Rosa chinensis
RcHm_v2.0_Chr7g0190581 Rosa chinensis
Rhsim08G0188100 Rhododendron simsii
Rhsim08G0188200 Rhododendron simsii
Sabra05G0041900 Salix brachista
Sabra13G0032100 Salix brachista
SalBow1G2492 Salvia bowleyana
SalBow2G2673 Salvia bowleyana
Sc06g0003550 Simmondsia chinensis
Sc06g0003580 Simmondsia chinensis
Sc22g0003870 Simmondsia chinensis
Sc22g0004190 Simmondsia chinensis
Sed0000726 Sechium edule
Sed0002077 Sechium edule
Sed0008911 Sechium edule
Sed0022250 Sechium edule
SEGI_07896 Sequoiadendron giganteum
SEGI_23021 Sequoiadendron giganteum
SGA_v2.0_scaffold137G35145 Striga asiatica
SGA_v2.0_scaffold250G45005 Striga asiatica
SGA_v2.0_scaffold37G14621 Striga asiatica
SGA_v2.0_scaffold5G02873 Striga asiatica
SHI26313 Sapria himalayana
SMO116G0298 Selaginella moellendorffii
SMO353G0194 Selaginella moellendorffii
Solyc01g100570.4 Solanum lycopersicum
Solyc05g055880.4 Solanum lycopersicum
Solyc09g083080.4 Solanum lycopersicum
Sopen01g044070 Solanum pennellii
Sopen05g034280 Solanum pennellii
Sopen09g031960 Solanum pennellii
Sp1g41760 Schrenkiella parvula
Sp2g17860 Schrenkiella parvula
Sp2g20400 Schrenkiella parvula
Sp3g03890 Schrenkiella parvula
Sp3g11000 Schrenkiella parvula
TAR362G0211 Trochodendron aralioides
TAR365G0043 Trochodendron aralioides
TAR374G0987 Trochodendron aralioides
TAR622G1164 Trochodendron aralioides
TAR624G0966 Trochodendron aralioides
TAR633G2345 Trochodendron aralioides
THA.LOC104810267 Tarenaya hassleriana
THA.LOC104816144 Tarenaya hassleriana
THA.LOC104818657 Tarenaya hassleriana
THA.LOC104821697 Tarenaya hassleriana
Thecc.03G126200 Theobroma cacao
Thecc.05G292200 Theobroma cacao
Thhalv10003966m.g Eutrema salsugineum
Thhalv10004082m.g Eutrema salsugineum
Thhalv10011387m.g Eutrema salsugineum
Thhalv10019711m.g Eutrema salsugineum
Thhalv10020473m.g Eutrema salsugineum
Thhalv10020558m.g Eutrema salsugineum
TPR.G16342 Trifolium pratense
TPR.G22166 Trifolium pratense
TPR.G23358 Trifolium pratense
TPR.G30017 Trifolium pratense
TPR.G33019 Trifolium pratense
TPR.G6703 Trifolium pratense
TWI12G1393 Tripterygium wilfordii
TWI14G0111 Tripterygium wilfordii
TWI36G0019 Tripterygium wilfordii
TWI39G0283 Tripterygium wilfordii
unitig_22.g5753 Utricularia gibba
unitig_66.g29100 Utricularia gibba
unitig_736.g23007 Utricularia gibba
unitig_747.g22001 Utricularia gibba
unitig_747.g22002 Utricularia gibba
unitig_8.g3594 Utricularia gibba
unitig_82.g26938 Utricularia gibba
vmacro02034 Vaccinium macrocarpon
vmacro19217 Vaccinium macrocarpon
vmacro19664 Vaccinium macrocarpon
vmacro21508 Vaccinium macrocarpon
VMungo0331G2024 Vigna mungo
VMungo1080G0898 Vigna mungo
VMungo1127G1099 Vigna mungo
Zm00001eb000300 Zea mays
Zm00001eb016780 Zea mays
Zm00001eb016970 Zea mays
Zm00001eb031420 Zea mays
Zm00001eb059250 Zea mays
Zm00001eb114100 Zea mays
Zm00001eb275560 Zea mays
Zm00001eb293910 Zea mays
Zm00001eb364220 Zea mays
Zm00001eb394640 Zea mays
Zm00001eb394750 Zea mays

User provided reference genes

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