Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A01p15810 Brassica napus
A02p12370 Brassica napus
A03p55290 Brassica napus
A06p20360 Brassica napus
A08p03570 Brassica napus
A08p21460 Brassica napus
A08p33790 Brassica napus
A09p64660 Brassica napus
Aa31LG1G4070 Aethionema arabicum
Aa31LG4G9540 Aethionema arabicum
Aa31LG4G9550 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_228.3950 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_228.5579 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_340.2092 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_340.2093 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_340.756 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_344.3722 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_344.4529 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_362.4 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_362.5 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_368.1269 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_368.1797 Anthoceros agrestis
Actinidia03178 Actinidia chinensis
Actinidia14321 Actinidia chinensis
Actinidia15071 Actinidia chinensis
Actinidia19254 Actinidia chinensis
Actinidia19617 Actinidia chinensis
Actinidia29656 Actinidia chinensis
Actinidia37408 Actinidia chinensis
Actinidia37409 Actinidia chinensis
Actinidia37410 Actinidia chinensis
Actinidia37411 Actinidia chinensis
Ah.01g003970 Amaranthus hybridus
Ah.02g130140 Amaranthus hybridus
Ah.03g133220 Amaranthus hybridus
AL1G21690 Arabidopsis lyrata
AL7G28770 Arabidopsis lyrata
AL7G28780 Arabidopsis lyrata
Aqoxy2G03242 Aquilegia oxysepala
Aqoxy3G02840 Aquilegia oxysepala
Aqoxy6G00666 Aquilegia oxysepala
Aqoxy6G00668_Aqoxy6G00669 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.52KDTF Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.8785AP Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.90XW7L Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.CRNC3Y Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.HM29ET Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.HU70H8 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.N2L19B Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.N8Y0HW Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.T41BVH Arachis hypogaea
AT1G10760 Arabidopsis thaliana
AT4G24440 Arabidopsis thaliana
AT4G24450 Arabidopsis thaliana
ATR0691G175 Amborella trichopoda
ATR0767G073 Amborella trichopoda
ATR1152G017 Amborella trichopoda
Atru.chr11.2087 Acer truncatum
Atru.chr11.619 Acer truncatum
Atru.chr13.973 Acer truncatum
Atru.chr13.974 Acer truncatum
AUR62005429 Chenopodium quinoa
AUR62014090 Chenopodium quinoa
AUR62014838 Chenopodium quinoa
AUR62017035 Chenopodium quinoa
BcaB08g37373 Brassica carinata
BcaC04g23602 Brassica carinata
BcaC06g32884 Brassica carinata
BcaC06g34403 Brassica carinata
BcaC07g38588 Brassica carinata
BcaC07g38627 Brassica carinata
BcaC08g43388 Brassica carinata
BcaC09g50867 Brassica carinata
BcaC09g50868 Brassica carinata
BcaNung05637 Brassica carinata
BcaNung06799 Brassica carinata
BolC1t01904H Brassica oleracea
BolC3t20986H Brassica oleracea
BolC3t20989H Brassica oleracea
BolC6t35845H Brassica oleracea
BolC7t43445H Brassica oleracea
BolC7t45851H Brassica oleracea
BolC8t48576H Brassica oleracea
BolC8t49029H Brassica oleracea
BolC8t52392H Brassica oleracea
BolC9t58777H Brassica oleracea
BraA01t01516Z Brassica rapa
BraA03t14588Z Brassica rapa
BraA06t23226Z Brassica rapa
BraA07t27914Z Brassica rapa
BraA07t30432Z Brassica rapa
BraA08t34095Z Brassica rapa
BraA08t35295Z Brassica rapa
BraA09t41826Z Brassica rapa
C01p19760 Brassica napus
C01p31290 Brassica napus
C01p47940 Brassica napus
C04p15580 Brassica napus
C06p07570 Brassica napus
C07p29060 Brassica napus
C07p53590 Brassica napus
C08p13950 Brassica napus
C08p48530 Brassica napus
C09p59380 Brassica napus
CAN.G1104.8 Capsicum annuum
CAN.G447.9 Capsicum annuum
CANSAT01G0055 Cannabis sativa
CANSAT25G2801 Cannabis sativa
CANSAT64G0829 Cannabis sativa
CARHR010980 Cardamine hirsuta
CARHR231830 Cardamine hirsuta
CARHR231840 Cardamine hirsuta
Carub.0001s1031 Capsella rubella
Carub.0007s1662 Capsella rubella
Carub.0007s1663 Capsella rubella
Ca_08744_v3 Cicer arietinum L.
Ca_22500_v3 Cicer arietinum L.
CBR_g12420 Chara braunii
CBR_g39013 Chara braunii
Cc10_g08370 Coffea canephora
Cc11_g15490 Coffea canephora
CDE04G1797 Ceratophyllum demersum
CDE04G2323 Ceratophyllum demersum
CDE04G3375 Ceratophyllum demersum
CDE04G3560 Ceratophyllum demersum
CDE06G0295 Ceratophyllum demersum
Cfa009191 Carpinus fangiana
Ciclev10002917m.g Citrus clementina
Ciclev10017434m.g Citrus clementina
Ciclev10030499m.g Citrus clementina
CiPaw.05G184800 Carya illinoinensis
CiPaw.07G162800 Carya illinoinensis
CiPaw.07G162900 Carya illinoinensis
CiPaw.07G163000 Carya illinoinensis
CiPaw.08G057200 Carya illinoinensis
ClCG05G025580 Citrullus lanatus
ClCG11G014700 Citrullus lanatus
COL.COLO4_24234 Corchorus olitorius
COL.COLO4_35285 Corchorus olitorius
COL.COLO4_35286 Corchorus olitorius
Cpa.g.sc21.43 Carica papaya
Cpa.g.sc69.90 Carica papaya
Cre07.g319300 Chlamydomonas reinhardtii
Cre07.g319340 Chlamydomonas reinhardtii
Cre07.g332300 Chlamydomonas reinhardtii
Cre07.g333252 Chlamydomonas reinhardtii
Cre08.g363874 Chlamydomonas reinhardtii
Cre10.g424150 Chlamydomonas reinhardtii
CsaV3_2G033350 Cucumis sativus L.
CsaV3_2G033370 Cucumis sativus L.
CsaV3_5G031320 Cucumis sativus L.
CSS0001204 Camellia sinensis var. sinensis
CSS0005618 Camellia sinensis var. sinensis
CSS0021224 Camellia sinensis var. sinensis
CSS0026904 Camellia sinensis var. sinensis
CSS0027855 Camellia sinensis var. sinensis
CSS0031876 Camellia sinensis var. sinensis
CSS0046721 Camellia sinensis var. sinensis
CSS0046983 Camellia sinensis var. sinensis
CSS0048442 Camellia sinensis var. sinensis
DCAR_006444 Daucus carota
DCAR_007066 Daucus carota
DCAR_007067 Daucus carota
DCAR_029738 Daucus carota
DCAR_031129 Daucus carota
Dinv15253 Davidia involucrata
Dinv24813 Davidia involucrata
Dinv42590 Davidia involucrata
Dinv42591 Davidia involucrata
Duzib041G0019 Durio zibethinus
Duzib041G0627 Durio zibethinus
Duzib116G0949 Durio zibethinus
Duzib268G0758 Durio zibethinus
ECA233G2601 Erigeron canadensis
ECA234G4650 Erigeron canadensis
ECA240G3991 Erigeron canadensis
ECA246G1742 Erigeron canadensis
EL10Ac6g13726 Beta vulgaris
EL10Ac8g20405 Beta vulgaris
EL10Ac9g20840 Beta vulgaris
Eucgr.F00436 Eucalyptus grandis
Eucgr.H02531 Eucalyptus grandis
FAN04G2369 Fragaria x ananassa
FAN04G2482 Fragaria x ananassa
FAN07G2766 Fragaria x ananassa
FAN12G2701 Fragaria x ananassa
FAN12G3618 Fragaria x ananassa
FAN17G2901 Fragaria x ananassa
FAN18G2982 Fragaria x ananassa
FAN22G0388 Fragaria x ananassa
FvH4_4g25800 Fragaria vesca
FvH4_5g34180 Fragaria vesca
FvH4_5g34191 Fragaria vesca
FvH4_5g34192 Fragaria vesca
FvH4_5g34193 Fragaria vesca
Glyma.02G216100 Glycine max
Glyma.04G096500 Glycine max
Glyma.06G098200 Glycine max
Glyma.08G283700 Glycine max
Glyma.14G183100 Glycine max
Glyma.18G142500 Glycine max
Gohir.A01G159900 Gossypium hirsutum
Gohir.A01G159950 Gossypium hirsutum
Gohir.A05G216400 Gossypium hirsutum
Gohir.A05G216500 Gossypium hirsutum
Gohir.A05G264200 Gossypium hirsutum
Gohir.A12G144350 Gossypium hirsutum
Gohir.A12G144400 Gossypium hirsutum
Gohir.D01G150200 Gossypium hirsutum
Gohir.D05G220900 Gossypium hirsutum
Gohir.D05G221000 Gossypium hirsutum
Gohir.D05G266700 Gossypium hirsutum
Gohir.D12G148950 Gossypium hirsutum
Gohir.D12G149000 Gossypium hirsutum
Gorai.002G186200 Gossypium raimondii
Gorai.008G160400 Gossypium raimondii
Gorai.009G228000 Gossypium raimondii
Gorai.009G228100 Gossypium raimondii
Gorai.009G278800 Gossypium raimondii
GSVIVG01009213001 Vitis vinifera
GSVIVG01013806001 Vitis vinifera
HanXRQChr03g0063191 Helianthus annuus
HanXRQChr03g0093361 Helianthus annuus
HanXRQChr05g0143271 Helianthus annuus
HanXRQChr09g0264681 Helianthus annuus
HanXRQChr10g0277741 Helianthus annuus
HanXRQChr10g0277751 Helianthus annuus
HanXRQChr11g0353851 Helianthus annuus
HanXRQChr12g0371851 Helianthus annuus
HanXRQChr12g0384161 Helianthus annuus
HanXRQChr17g0547611 Helianthus annuus
HanXRQChr17g0547621 Helianthus annuus
Haze_12225 Corylus avellana
Haze_22489 Corylus avellana
Haze_27711 Corylus avellana
Hma1.2p1_0044F.1_g026380 Hydrangea macrophylla
Hma1.2p1_0125F.1_g058680 Hydrangea macrophylla
Hma1.2p1_0125F.1_g058690 Hydrangea macrophylla
Hma1.2p1_0223F.1_g094185 Hydrangea macrophylla
Hma1.2p1_0344F.1_g131080 Hydrangea macrophylla
Hma1.2p1_1861F.1_g305660 Hydrangea macrophylla
HPP92_003084 Vanilla planifolia
HPP92_010288 Vanilla planifolia
Hund01464 Selenicereus undatus
Hund06013 Selenicereus undatus
Hund07854 Selenicereus undatus
Hund18026 Selenicereus undatus
Hund25378 Selenicereus undatus
Hund25379 Selenicereus undatus
Lalb_Chr08g0242611 Lupinus albus
Lalb_Chr09g0334851 Lupinus albus
Lalb_Chr09g0334861 Lupinus albus
Lalb_Chr09g0334871 Lupinus albus
Lalb_Chr09g0334881 Lupinus albus
Lalb_Chr11g0064851 Lupinus albus
Lalb_Chr16g0392241 Lupinus albus
Lalb_Chr23g0269931 Lupinus albus
Lalb_Chr23g0269941 Lupinus albus
Lj4A85G30 Lonicera japonica
Lj4A85G31 Lonicera japonica
Lj4A85G32 Lonicera japonica
Lj4g0012667 Lotus japonicus
Lj6A809T49 Lonicera japonica
Lj6C809G13 Lonicera japonica
LjContig00408g0006754 Lotus japonicus
Lsat_1_v5_gn_4_160220 Lactuca sativa
Lsat_1_v5_gn_4_4920 Lactuca sativa
Lsat_1_v5_gn_4_60280 Lactuca sativa
Lsat_1_v5_gn_6_107360 Lactuca sativa
Lsat_1_v5_gn_7_43741 Lactuca sativa
Lsat_1_v5_gn_8_153980 Lactuca sativa
Manes.05G189000 Manihot esculenta
Manes.13G026800 Manihot esculenta
Manes.18G057000 Manihot esculenta
Mapoly0012s0108 Marchantia polymorpha
Mapoly0038s0029 Marchantia polymorpha
Mapoly0046s0022 Marchantia polymorpha
Mapoly0046s0023 Marchantia polymorpha
Mapoly0067s0078 Marchantia polymorpha
MBI02_g34989_MAGBIO Magnolia biondii
MBI05_g39009_MAGBIO Magnolia biondii
MBI15_g14939_MAGBIO Magnolia biondii
MBI16_g14597_MAGBIO Magnolia biondii
MBI16_g27903_MAGBIO Magnolia biondii
MBI17_g30593_MAGBIO Magnolia biondii
MBI17_g38829_MAGBIO Magnolia biondii
MBI19_g32700_MAGBIO Magnolia biondii
MBI19_g33777_MAGBIO Magnolia biondii
MCO02G023 Micromonas commoda
MCO02G032 Micromonas commoda
MCO06G074 Micromonas commoda
MCO07G158 Micromonas commoda
MCO16G440 Micromonas commoda
MD08G1203800 Malus domestica
MD08G1203900 Malus domestica
MD13G1096800 Malus domestica
MD16G1097800 Malus domestica
Medtr5g066740 Medicago truncatula
Medtr7g005540 Medicago truncatula
Medtr8g069760 Medicago truncatula
MELO3C008106.2 Cucumis melo
MELO3C011972.2 Cucumis melo
Migut.B00439 Erythranthe guttata
Migut.L01476 Erythranthe guttata
Migut.N01147 Erythranthe guttata
MSTRG.16686 Avicennia marina
MSTRG.27758 Avicennia marina
MSTRG.5323 Avicennia marina
MSTRG.577 Avicennia marina
MSTRG.7915 Avicennia marina
Nitab4.5_0000354g0080 Nicotiana tabacum
Nitab4.5_0000885g0060 Nicotiana tabacum
Nitab4.5_0002255g0040 Nicotiana tabacum
Nitab4.5_0007943g0010 Nicotiana tabacum
Nn1g05642 Nelumbo nucifera
Nn4g22680 Nelumbo nucifera
Nn5g29817 Nelumbo nucifera
Oeu038169.3 Olea europaea
Oeu038612.1 Olea europaea
Oeu040884.1 Olea europaea
Os01g0970500 Oryza sativa ssp. japonica
Os05g0107700 Oryza sativa ssp. japonica
Os06g0474866 Oryza sativa ssp. japonica
Os06g0498400 Oryza sativa ssp. japonica
Peaxi162Scf00160g00913 Petunia axillaris
Peaxi162Scf00515g00133 Petunia axillaris
PGR042G3224 Punica granatum
PGR119G2090 Punica granatum
PGSC0003DMG400002052 Solanum tuberosum
PGSC0003DMG400007677 Solanum tuberosum
Phvul.003G062900 Phaseolus vulgaris
Phvul.008G183300 Phaseolus vulgaris
Potri.005G151700 Populus trichocarpa
Potri.008G188150 Populus trichocarpa
Potri.010G044100 Populus trichocarpa
Pp3c15_13540 Physcomitrium patens
Pp3c3_11200 Physcomitrium patens
Pp3c8_6520 Physcomitrium patens
Pp3c8_6536 Physcomitrium patens
Pp3c9_10830 Physcomitrium patens
PRCOL_00000768 Prasinoderma coloniale
PRCOL_00001724 Prasinoderma coloniale
PRCOL_00006458 Prasinoderma coloniale
Prupe.1G248900 Prunus persica
Prupe.1G536100 Prunus persica
Prupe.1G536300 Prunus persica
Psat0s2399g0160 Pisum sativum
Psat2g064960 Pisum sativum
Psat4g114160 Pisum sativum
Psat4g114200 Pisum sativum
Psat4g114240 Pisum sativum
PSO013G0324 Papaver somniferum
PSO063G5092 Papaver somniferum
PSO675G6980 Papaver somniferum
PSO700G0345 Papaver somniferum
PSO761G0276 Papaver somniferum
PSO832G0819 Papaver somniferum
PSO832G3977 Papaver somniferum
QL03p058693 Quercus lobata
QL09p018643 Quercus lobata
QL09p018667 Quercus lobata
RcHm_v2.0_Chr2g0129611 Rosa chinensis
RcHm_v2.0_Chr4g0433251 Rosa chinensis
RcHm_v2.0_Chr5g0012851 Rosa chinensis
RcHm_v2.0_Chr6g0270131 Rosa chinensis
RcHm_v2.0_Chr7g0233431 Rosa chinensis
RcHm_v2.0_Chr7g0233761 Rosa chinensis
RcHm_v2.0_Chr7g0233791 Rosa chinensis
RcHm_v2.0_Chr7g0233821 Rosa chinensis
RcHm_v2.0_Chr7g0233921 Rosa chinensis
RcHm_v2.0_Chr7g0233931 Rosa chinensis
RcHm_v2.0_Chr7g0234231 Rosa chinensis
RcHm_v2.0_Chr7g0234461 Rosa chinensis
RcHm_v2.0_Chr7g0234611 Rosa chinensis
RcHm_v2.0_Chr7g0234621 Rosa chinensis
Rhsim02G0071900 Rhododendron simsii
Rhsim07G0213400 Rhododendron simsii
Rhsim07G0213700 Rhododendron simsii
Rhsim12G0042000 Rhododendron simsii
Rhsim12G0113000 Rhododendron simsii
Sabra02G0086900 Salix brachista
Sabra05G0119200 Salix brachista
Sabra08G0142500 Salix brachista
Sabra10G0023900 Salix brachista
SalBow2G1604 Salvia bowleyana
SalBow3G1925 Salvia bowleyana
SalBow6G3832 Salvia bowleyana
SalBow6G5818 Salvia bowleyana
Sc04g0009380 Simmondsia chinensis
Sed0006405 Sechium edule
Sed0015347 Sechium edule
Sed0016266 Sechium edule
Sed0024840 Sechium edule
SEGI_00062 Sequoiadendron giganteum
SEGI_00676 Sequoiadendron giganteum
SEGI_12281 Sequoiadendron giganteum
SEGI_25233 Sequoiadendron giganteum
SEGI_32317 Sequoiadendron giganteum
SEGI_32533 Sequoiadendron giganteum
SEGI_33023 Sequoiadendron giganteum
SEGI_38232 Sequoiadendron giganteum
SEGI_38712 Sequoiadendron giganteum
SGA_v2.0_scaffold219G42523 Striga asiatica
SGA_v2.0_scaffold228G43260 Striga asiatica
SGA_v2.0_scaffold337G49194 Striga asiatica
SHI29728 Sapria himalayana
SMO069G0004 Selaginella moellendorffii
SMO133G0036 Selaginella moellendorffii
SMO169G0007 Selaginella moellendorffii
SMO347G0598 Selaginella moellendorffii
Solyc05g005020.4 Solanum lycopersicum
Solyc12g088030.2 Solanum lycopersicum
Sopen05g001030 Solanum pennellii
Sopen12g030060 Solanum pennellii
Sp1g09460 Schrenkiella parvula
Sp7g22400 Schrenkiella parvula
Sp7g22430 Schrenkiella parvula
TAR374G1700 Trochodendron aralioides
TAR381G0322 Trochodendron aralioides
TAR622G0036 Trochodendron aralioides
TAR625G0060 Trochodendron aralioides
TAR628G1058 Trochodendron aralioides
THA.LOC104799853 Tarenaya hassleriana
THA.LOC104799855 Tarenaya hassleriana
THA.LOC104815469 Tarenaya hassleriana
THA.LOC104823655 Tarenaya hassleriana
Thecc.02G256300 Theobroma cacao
Thecc.08G073900 Theobroma cacao
Thecc.08G074000 Theobroma cacao
Thhalv10006565m.g Eutrema salsugineum
Thhalv10024230m.g Eutrema salsugineum
Thhalv10026637m.g Eutrema salsugineum
TPR.G15622 Trifolium pratense
TPR.G23137 Trifolium pratense
TPR.G38776 Trifolium pratense
TWI09G0135 Tripterygium wilfordii
TWI18G0188 Tripterygium wilfordii
TWI56G0439 Tripterygium wilfordii
TWI73G1055 Tripterygium wilfordii
TWI75G1447 Tripterygium wilfordii
unitig_22.g6842 Utricularia gibba
unitig_26.g10358 Utricularia gibba
unitig_8.g3420 Utricularia gibba
vmacro01143 Vaccinium macrocarpon
vmacro04624 Vaccinium macrocarpon
vmacro04625 Vaccinium macrocarpon
vmacro04633 Vaccinium macrocarpon
vmacro04634 Vaccinium macrocarpon
vmacro04635 Vaccinium macrocarpon
vmacro16213 Vaccinium macrocarpon
VMungo0251G0184 Vigna mungo
VMungo0647G1399 Vigna mungo
Zm00001eb072320 Zea mays
Zm00001eb139900 Zea mays
Zm00001eb278140 Zea mays
Zm00001eb356100 Zea mays
Zm00001eb398390 Zea mays

User provided reference genes

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