Gene: Carub.0007s1663
General Information
Structural Information
- Species Capsella rubella
- Gene Identifier Carub.0007s1663
- Transcript Identifier Carub.0007s1663.1
- Gene Type Coding gene
- Location scaffold_7 : 6190354-6191798 : negative
Gene Family Information
- ID HOM05D001366
- #Genes/#Species 457/100
- Phylogenetic origin
- ID ORTHO05D005449
- #Genes/#Species 157/93
- Phylogenetic origin
Gene Duplication Information
- Tandem Duplication Tandem duplicate
Labels
Identifiers
- id Carub.0007s1663.v1.1
- pacid 39233064
- synonym Carubv10006082m.g
Descriptions
- Description K03123 - transcription initiation factor TFIIA small subunit (TFIIA2, GTF2A2, TOA2)
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0006367 | IEA | InterPro | transcription initiation from RNA polymerase II promoter |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005672 | IEA | InterPro | transcription factor TFIIA complex |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR015871 | Transcription initiation factor IIA, gamma subunit, C-terminal |
| IPR015872 | Transcription initiation factor IIA, gamma subunit, N-terminal |
| IPR009088 | Transcription factor IIA, beta-barrel |
| IPR003194 | Transcription initiation factor IIA, gamma subunit |
| IPR009083 | Transcription factor IIA, alpha-helical domain |
| Mapman id | Description |
|---|---|
| 15.3.3.1.2 | RNA biosynthesis.RNA polymerase II-dependent transcription.transcription initiation.TFIIa basal transcription factor heterodimer.small subunit |