Gene: Pp3c9_10830

General Information

Structural Information

  • Species Physcomitrium patens
  • Gene Identifier Pp3c9_10830
  • Transcript Identifier Pp3c9_10830V3.1
  • Gene Type Coding gene
  • Location Chr09 : 7214558-7215392 : negative

Gene Family Information

  • ID HOM05D001366
  • #Genes/#Species 457/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • name Pp3c9_10830V3.1
  • pacid 32911627
  • alias Pp1s29_333V6
  • alias Phpat.009G043000
  • alias Phypa_178304
  • uniprot A9RUT3

Descriptions

  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006367
IEA
GOA Databasetranscription initiation from RNA polymerase II promoter
GO:0006367
IEA
InterProtranscription initiation from RNA polymerase II promoter
GO:0051123
IBA
GOA DatabaseRNA polymerase II preinitiation complex assembly

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0017025
IBA
GOA DatabaseTBP-class protein binding
GO:0016251
IBA
GOA DatabaseRNA polymerase II general transcription initiation factor activity

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005672
IBA
IEA
GOA Databasetranscription factor TFIIA complex
GO:0005672
IEA
InterProtranscription factor TFIIA complex
GO:0005634
IEA
GOA Databasenucleus

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR015872 Transcription initiation factor IIA, gamma subunit, N-terminal
IPR015871 Transcription initiation factor IIA, gamma subunit, C-terminal
IPR009088 Transcription factor IIA, beta-barrel
IPR003194 Transcription initiation factor IIA, gamma subunit
IPR009083 Transcription factor IIA, alpha-helical domain
Mapman id Description
15.3.3.1.2 RNA biosynthesis.RNA polymerase II-dependent transcription.transcription initiation.TFIIa basal transcription factor heterodimer.small subunit