Gene: PGSC0003DMG400002052
General Information
Structural Information
- Species Solanum tuberosum
- Gene Identifier PGSC0003DMG400002052
- Transcript Identifier PGSC0003DMT400005199
- Gene Type Coding gene
- Location ST4.03ch12 : 55861985-55866545 : negative
Gene Family Information
- ID HOM05D001366
- #Genes/#Species 457/100
- Phylogenetic origin
- ID ORTHO05D005449
- #Genes/#Species 157/93
- Phylogenetic origin
Gene Duplication Information
Labels
Identifiers
- pacid 37448947
- id PGSC0003DMG400002052.v4.03
- uniprot M0ZPL5
Descriptions
- Description Transcription initiation factor iia (Tfiia), gamma chain
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0006367 | IEA | GOA Database | transcription initiation from RNA polymerase II promoter | |
| GO:0006367 | IEA | InterPro | transcription initiation from RNA polymerase II promoter | |
| GO:0051123 | IBA | GOA Database | RNA polymerase II preinitiation complex assembly |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0017025 | IBA | GOA Database | TBP-class protein binding | |
| GO:0016251 | IBA | GOA Database | RNA polymerase II general transcription initiation factor activity |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005672 | IBA IEA | GOA Database | transcription factor TFIIA complex | |
| GO:0005672 | IEA | InterPro | transcription factor TFIIA complex | |
| GO:0005634 | IEA | GOA Database | nucleus |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR003194 | Transcription initiation factor IIA, gamma subunit |
| IPR015871 | Transcription initiation factor IIA, gamma subunit, C-terminal |
| IPR009088 | Transcription factor IIA, beta-barrel |
| IPR015872 | Transcription initiation factor IIA, gamma subunit, N-terminal |
| IPR009083 | Transcription factor IIA, alpha-helical domain |
| Mapman id | Description |
|---|---|
| 15.3.3.1.2 | RNA biosynthesis.RNA polymerase II-dependent transcription.transcription initiation.TFIIa basal transcription factor heterodimer.small subunit |