Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro18934 Vaccinium macrocarpon HOM05D007289 ORTHO05D009215 1.1e-215 753.1 392 100.0
Rhsim08G0218600 Rhododendron simsii HOM05D007289 ORTHO05D009215 1.7e-152 543.1 408 72.8
CSS0039074 Camellia sinensis var. sinensis HOM05D007289 ORTHO05D009215 1.6e-145 520.0 402 70.4
Dinv30529 Davidia involucrata HOM05D007289 ORTHO05D009215 9.0e-133 477.6 402 66.2
TAR383G0594 Trochodendron aralioides HOM05D007289 ORTHO05D009215 2.6e-124 449.5 400 62.5
Prupe.3G073900 Prunus persica HOM05D007289 ORTHO05D009215 7.1e-122 441.4 396 62.4
Actinidia15825 Actinidia chinensis HOM05D002927 ORTHO05D003841 1.2e-121 440.7 328 73.8
RcHm_v2.0_Chr2g0137421 Rosa chinensis HOM05D007289 ORTHO05D009215 2.6e-116 422.9 390 60.5
MD17G1197800 Malus domestica HOM05D007289 ORTHO05D009215 3.8e-115 419.1 395 60.5
Ciclev10025766m.g Citrus clementina HOM05D007289 ORTHO05D009215 4.9e-115 418.7 391 59.3
Lj9C506T12 Lonicera japonica HOM05D007289 ORTHO05D009215 1.9e-111 406.8 416 57.7
FvH4_6g30910 Fragaria vesca HOM05D007289 ORTHO05D009215 9.6e-111 404.4 385 59.7
Atru.chr1.3224 Acer truncatum HOM05D007289 ORTHO05D009215 2.1e-110 403.3 392 57.9
FAN02G0535 Fragaria x ananassa HOM05D007289 ORTHO05D009215 2.6e-108 396.4 386 58.8
Potri.001G178100 Populus trichocarpa HOM05D007289 ORTHO05D009215 4.5e-108 395.6 380 56.8
Aqoxy7G01850 Aquilegia oxysepala HOM05D007289 ORTHO05D009215 5.9e-108 395.2 393 55.5
Gohir.A02G122500 Gossypium hirsutum HOM05D007289 ORTHO05D009215 2.2e-107 393.3 396 56.3
QL05p025382 Quercus lobata HOM05D007289 ORTHO05D009215 4.2e-106 389.0 399 57.1
DCAR_016227 Daucus carota HOM05D007289 ORTHO05D009215 9.3e-106 387.9 393 57.8
Gorai.002G058300 Gossypium raimondii HOM05D007289 ORTHO05D009215 1.2e-105 387.5 396 55.6
Lalb_Chr22g0351171 Lupinus albus HOM05D007289 ORTHO05D009215 1.2e-105 387.5 390 56.2
Manes.04G121300 Manihot esculenta HOM05D007289 ORTHO05D009215 2.7e-105 386.3 397 54.9
GSVIVG01017153001 Vitis vinifera HOM05D007289 ORTHO05D009215 4.6e-105 385.6 339 62.8
CANSAT56G1700 Cannabis sativa HOM05D007289 ORTHO05D009215 7.9e-105 384.8 384 57.0
Lalb_Chr14g0373531 Lupinus albus HOM05D007289 ORTHO05D009215 1.0e-104 384.4 388 54.9
MSTRG.11091 Avicennia marina HOM05D007289 ORTHO05D009215 3.0e-104 382.9 376 57.4
Sabra01G0148500 Salix brachista HOM05D007289 ORTHO05D009215 3.0e-104 382.9 392 54.1
Cfa002049 Carpinus fangiana HOM05D007289 ORTHO05D009215 3.3e-103 379.4 395 56.7
CiPaw.02G152300 Carya illinoinensis HOM05D007289 ORTHO05D009215 4.3e-103 379.0 376 56.4
TPR.G37243 Trifolium pratense HOM05D007289 ORTHO05D009215 5.7e-103 378.6 384 55.2
TWI75G1369 Tripterygium wilfordii HOM05D007289 ORTHO05D009215 1.3e-102 377.5 380 56.1
Ca_01106_v3 Cicer arietinum L. HOM05D007289 ORTHO05D009215 1.6e-102 377.1 384 55.2
Cc04_g03590 Coffea canephora HOM05D007289 ORTHO05D009215 2.2e-102 376.7 397 54.2
Glyma.13G360800 Glycine max HOM05D007289 ORTHO05D009215 2.8e-102 376.3 397 53.4
Solyc06g066780.3 Solanum lycopersicum HOM05D007289 ORTHO05D009215 3.7e-102 375.9 382 56.5
PGSC0003DMG400016511 Solanum tuberosum HOM05D007289 ORTHO05D009215 3.7e-102 375.9 382 56.0
Thecc.06G082700 Theobroma cacao HOM05D007289 ORTHO05D009215 4.8e-102 375.6 393 54.7
Phvul.005G172600 Phaseolus vulgaris HOM05D007289 ORTHO05D009215 6.3e-102 375.2 384 53.9
Sopen06g025060 Solanum pennellii HOM05D007289 ORTHO05D009215 1.4e-101 374.0 382 56.3
VMungo1080G1522 Vigna mungo HOM05D007289 ORTHO05D009215 1.4e-101 374.0 396 53.0
PSO782G0119 Papaver somniferum HOM05D007289 ORTHO05D009215 2.4e-101 373.2 392 53.6
Lj3g0010801 Lotus japonicus HOM05D007289 ORTHO05D009215 1.2e-100 370.9 390 53.6
MBI04_g26647_MAGBIO Magnolia biondii HOM05D007289 ORTHO05D009215 2.0e-100 370.2 386 55.2
Nitab4.5_0002327g0060 Nicotiana tabacum HOM05D007289 ORTHO05D009215 2.6e-100 369.8 399 55.1
COL.COLO4_30328 Corchorus olitorius HOM05D007289 ORTHO05D009215 3.4e-100 369.4 394 54.1
Psat5g299280 Pisum sativum HOM05D007289 ORTHO05D009215 3.4e-100 369.4 382 53.9
CsaV3_7G033000 Cucumis sativus L. HOM05D007289 ORTHO05D009215 7.7e-100 368.2 396 55.6
Oeu033497.1 Olea europaea HOM05D007289 ORTHO05D009215 7.7e-100 368.2 355 57.5
MELO3C023367.2 Cucumis melo HOM05D007289 ORTHO05D009215 3.8e-99 365.9 396 55.3
Peaxi162Scf00207g00834 Petunia axillaris HOM05D007289 ORTHO05D009215 3.8e-99 365.9 314 61.1
Sc12g0009160 Simmondsia chinensis HOM05D007289 ORTHO05D009215 5.0e-99 365.5 400 51.5
Sed0021795 Sechium edule HOM05D007289 ORTHO05D009215 6.5e-99 365.2 394 54.1
PGR102G0666 Punica granatum HOM05D007289 ORTHO05D009215 9.4e-98 361.3 391 52.4
Hund06601 Selenicereus undatus HOM05D007289 ORTHO05D009215 4.6e-97 359.0 397 52.9
Medtr2g102430 Medicago truncatula HOM05D007289 ORTHO05D009215 2.3e-96 356.7 379 52.8
CAN.G395.19 Capsicum annuum HOM05D007289 ORTHO05D009215 9.7e-95 351.3 374 54.0
arahy.Tifrunner.gnm1.ann1.UJ7D22 Arachis hypogaea HOM05D007289 ORTHO05D009215 1.7e-94 350.5 399 51.6
arahy.Tifrunner.gnm1.ann1.HRS6MU Arachis hypogaea HOM05D007289 ORTHO05D009215 6.9e-93 345.1 399 51.4
AL2G41080 Arabidopsis lyrata HOM05D007289 ORTHO05D009215 1.5e-92 344.0 378 52.6
Thhalv10018735m.g Eutrema salsugineum HOM05D007289 ORTHO05D009215 2.6e-92 343.2 380 51.8
Migut.I00845 Erythranthe guttata HOM05D007289 ORTHO05D009215 1.3e-91 340.9 377 51.2
HanXRQChr16g0501051 Helianthus annuus HOM05D007289 ORTHO05D009215 1.3e-91 340.9 394 51.5
AUR62016430 Chenopodium quinoa HOM05D007289 ORTHO05D009215 1.7e-91 340.5 403 49.9
THA.LOC104808206 Tarenaya hassleriana HOM05D007289 ORTHO05D009215 2.2e-91 340.1 400 53.5
Sp5g35390 Schrenkiella parvula HOM05D007289 ORTHO05D009215 6.5e-91 338.6 379 54.1
ECA232G0523 Erigeron canadensis HOM05D007289 ORTHO05D009215 8.5e-91 338.2 386 51.0
AT1G80420 Arabidopsis thaliana HOM05D007289 ORTHO05D009215 1.9e-90 337.0 381 51.7
AUR62011614 Chenopodium quinoa HOM05D007289 ORTHO05D009215 3.2e-90 336.3 405 49.1
FAN09G0173 Fragaria x ananassa HOM05D007289 ORTHO05D009215 5.5e-90 335.5 354 56.5
Aa31LG4G690 Aethionema arabicum HOM05D007289 ORTHO05D009215 7.2e-90 335.1 400 51.8
Lsat_1_v5_gn_4_103480 Lactuca sativa HOM05D007289 ORTHO05D009215 9.4e-90 334.7 389 50.9
CARHR074820 Cardamine hirsuta HOM05D007289 ORTHO05D009215 1.4e-88 330.9 378 52.9
BcaB05g25270 Brassica carinata HOM05D002927 ORTHO05D003841 2.3e-88 330.1 322 56.5
Carub.0002s2715 Capsella rubella HOM05D007289 ORTHO05D009215 1.5e-87 327.4 382 52.1
A02p23560 Brassica napus HOM05D007289 ORTHO05D009215 1.3e-86 324.3 384 50.0
BraA02t07349Z Brassica rapa HOM05D007289 ORTHO05D009215 1.3e-86 324.3 384 50.0
BolC2t09743H Brassica oleracea HOM05D007289 ORTHO05D009215 1.7e-86 323.9 380 51.1
BcaC03g15968 Brassica carinata HOM05D007289 ORTHO05D009215 4.8e-86 322.4 380 51.1
Os06g0144000 Oryza sativa ssp. japonica HOM05D007289 ORTHO05D009215 8.2e-86 321.6 386 47.9
C02p37330 Brassica napus HOM05D007289 ORTHO05D009215 1.1e-85 321.2 380 51.1
EL10Ac9g21988 Beta vulgaris HOM05D007289 ORTHO05D009215 1.4e-85 320.9 464 44.0
Nn8g39279 Nelumbo nucifera HOM05D007289 ORTHO05D009215 1.8e-85 320.5 369 52.6
ATR0037G063 Amborella trichopoda HOM05D007289 ORTHO05D009215 1.6e-81 307.4 414 45.2
Duzib235G0864 Durio zibethinus HOM05D007289 ORTHO05D009215 6.1e-81 305.4 396 48.0
PSO339G0085 Papaver somniferum HOM05D007289 ORTHO05D009215 2.3e-80 303.5 275 56.7
SalBow2G1977 Salvia bowleyana HOM05D007289 ORTHO05D009215 2.8e-78 296.6 388 48.2
CDE02G4373 Ceratophyllum demersum HOM05D004733 ORTHO05D005925 3.1e-77 293.1 389 46.8
Cpa.g.sc10.164 Carica papaya HOM05D007289 ORTHO05D009215 2.9e-75 286.6 290 54.1
Haze_16457 Corylus avellana HOM05D007289 ORTHO05D009215 2.7e-68 263.5 589 35.7
SEGI_14605 Sequoiadendron giganteum HOM05D007289 ORTHO05D009215 2.8e-65 253.4 342 43.6
HPP92_000676 Vanilla planifolia HOM05D007289 ORTHO05D009215 4.1e-61 239.6 274 48.2
Glyma.15G013100 Glycine max HOM05D007289 ORTHO05D009215 1.1e-58 231.5 254 54.3
FAN05G4017 Fragaria x ananassa HOM05D007289 ORTHO05D009215 1.5e-55 221.1 170 66.5
Eucgr.F03006 Eucalyptus grandis HOM05D007289 ORTHO05D009215 9.8e-55 218.4 227 53.3
Gohir.D03G073900 Gossypium hirsutum HOM05D007289 ORTHO05D009215 4.9e-54 216.1 224 55.4
Pp3c15_20480 Physcomitrium patens HOM05D007289 ORTHO05D009215 2.7e-52 210.3 303 40.3
Nitab4.5_0021849g0010 Nicotiana tabacum HOM05D007289 ORTHO05D009215 1.1e-48 198.4 212 53.8
TWI12G0812 Tripterygium wilfordii HOM05D007289 ORTHO05D009215 9.8e-47 191.8 211 52.6
ClCG09G002310 Citrullus lanatus HOM05D007289 ORTHO05D009215 3.7e-46 189.9 179 57.5
FAN05G4871 Fragaria x ananassa HOM05D007289 ORTHO05D009215 4.1e-45 186.4 145 69.0
Mapoly0044s0047 Marchantia polymorpha HOM05D007289 ORTHO05D009215 3.5e-44 183.3 390 35.1
unitig_21.g20513 Utricularia gibba HOM05D007289 ORTHO05D009215 2.1e-41 174.1 385 35.8
ClCG09G002320 Citrullus lanatus HOM05D007289 ORTHO05D009215 8.6e-35 152.1 255 42.4
Zm00001eb377280 Zea mays HOM05D007289 ORTHO05D009215 1.9e-34 151.0 205 43.9
SEGI_13111 Sequoiadendron giganteum HOM05D007289 ORTHO05D009215 4.0e-32 143.3 181 47.0
Hma1.2p1_0845F.1_g227540 Hydrangea macrophylla HOM05D007289 ORTHO05D009215 1.5e-31 141.4 132 59.8
CBR_g23739 Chara braunii HOM05D007289 ORTHO05D009215 3.8e-30 136.7 103 57.3
Lj2P1136T43 Lonicera japonica HOM05D007289 ORTHO05D009215 2.8e-25 120.6 111 59.5
Ah.01g011120 Amaranthus hybridus HOM05D007289 ORTHO05D009215 1.2e-20 105.1 144 41.0
Pp3c21_18730 Physcomitrium patens HOM05D007289 ORTHO05D009215 2.3e-11 74.3 105 32.4
CDE02G2376 Ceratophyllum demersum HOM05D001245 ORTHO05D004475 3.8e-06 57.0 112 33.0


User provided reference genes

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