Gene: Nitab4.5_0021849g0010

General Information

Structural Information

  • Species Nicotiana tabacum
  • Gene Identifier Nitab4.5_0021849g0010
  • Transcript Identifier Nitab4.5_0021849g0010.1
  • Gene Type Coding gene
  • Location Nitab4.5_0021849 : 2787-5787 : negative

Gene Family Information

  • ID HOM05D007289
  • #Genes/#Species 107/91
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Nitab4.5_0021849g0010.1
  • SR1-identifier Nta12g10240.1

Descriptions

  • Description Unknown
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:1901969
ISO
PLAZA Integrative Orthologypositive regulation of polynucleotide 3'-phosphatase activity AT1G80420
GO:0000012
ISO
PLAZA Homology (enrichment)single strand break repair HOM05D007289
GO:0006284
ISO
PLAZA Homology (enrichment)base-excision repair HOM05D007289
GO:0080111
ISO
PLAZA Integrative OrthologyDNA demethylation AT1G80420
GO:0006266
ISO
PLAZA Integrative OrthologyDNA ligation AT1G80420
GO:1901972
ISO
PLAZA Integrative Orthologypositive regulation of DNA-5-methylcytosine glycosylase activity AT1G80420
GO:0006303
ISO
PLAZA Integrative Orthologydouble-strand break repair via nonhomologous end joining AT1G80420

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0010385
ISO
PLAZA Integrative Orthologydouble-stranded methylated DNA binding AT1G80420
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT1G80420
GO:0003684
ISO
PLAZA Homology (enrichment)damaged DNA binding HOM05D007289

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
No InterPro domains detected for this gene.
Mapman id Description
14.5.7 DNA damage response.base excision repair (BER).DNA repair protein (XRCC1)