Gene: BcaB05g25270
General Information
Structural Information
- Species Brassica carinata
- Gene Identifier BcaB05g25270
- Transcript Identifier BcaB05g25270
- Gene Type Coding gene
- Location ChrB05 : 55314180-55322571 : positive
Gene Family Information
- ID HOM05D002927
- #Genes/#Species 235/98
- Phylogenetic origin
- ID ORTHO05D003841
- #Genes/#Species 202/98
- Phylogenetic origin
Gene Duplication Information
- Block Duplication Block duplicate
Labels
Identifiers
Descriptions
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0000012 | IEA | InterPro | single strand break repair | |
| GO:0006284 | IEA | InterPro | base-excision repair | |
| GO:0006303 | IEA | InterPro | double-strand break repair via nonhomologous end joining | |
| GO:0009793 | ISO | PLAZA Integrative Orthology | embryo development ending in seed dormancy | AT1G80410 |
| GO:0009414 | ISO | PLAZA Integrative Orthology | response to water deprivation | AT1G80410 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0003684 | IEA | InterPro | damaged DNA binding | |
| GO:0005515 | IEA | InterPro | protein binding |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0031415 | ISO | PLAZA Integrative Orthology | NatA complex | AT1G80410 |
| GO:0005829 | ISO | PLAZA Integrative Orthology | cytosol | AT1G80410 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR045080 | XRCC1, first (central) BRCT domain |
| IPR019734 | Tetratricopeptide repeat |
| IPR001357 | BRCT domain |
| IPR036420 | BRCT domain superfamily |
| IPR021183 | N-terminal acetyltransferase A, auxiliary subunit |
| IPR011990 | Tetratricopeptide-like helical domain superfamily |
| IPR001440 | Tetratricopeptide repeat 1 |