Gene: Lsat_1_v5_gn_4_103480

General Information

Structural Information

  • Species Lactuca sativa
  • Gene Identifier Lsat_1_v5_gn_4_103480
  • Transcript Identifier Lsat_1_v5_gn_4_103480.2
  • Gene Type Coding gene
  • Location Lsat_1_v8_lg_4 : 175878572-175880992 : positive

Gene Family Information

  • ID HOM05D007289
  • #Genes/#Species 107/91
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • id Lsat_1_v5_gn_4_103480.v5
  • pacid 38929790

Descriptions

  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0000012
IEA
InterProsingle strand break repair
GO:0006284
IEA
InterProbase-excision repair
GO:0006303
IEA
InterProdouble-strand break repair via nonhomologous end joining
GO:1901969
ISO
PLAZA Integrative Orthologypositive regulation of polynucleotide 3'-phosphatase activity AT1G80420
GO:0080111
ISO
PLAZA Integrative OrthologyDNA demethylation AT1G80420
GO:0006266
ISO
PLAZA Integrative OrthologyDNA ligation AT1G80420
GO:1901972
ISO
PLAZA Integrative Orthologypositive regulation of DNA-5-methylcytosine glycosylase activity AT1G80420

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003684
IEA
InterProdamaged DNA binding
GO:0010385
ISO
PLAZA Integrative Orthologydouble-stranded methylated DNA binding AT1G80420
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT1G80420

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR036420 BRCT domain superfamily
IPR001357 BRCT domain
IPR045080 XRCC1, first (central) BRCT domain
Mapman id Description
14.5.7 DNA damage response.base excision repair (BER).DNA repair protein (XRCC1)