Gene: Os06g0144000

General Information

Structural Information

  • Species Oryza sativa ssp. japonica
  • Gene Identifier Os06g0144000
  • Transcript Identifier Os06t0144000-01
  • Gene Type Coding gene
  • Location chr06 : 2330120-2334286 : positive

Gene Family Information

  • ID HOM05D007289
  • #Genes/#Species 107/91
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Os06t0144000-01
  • MSU-ID LOC_Os06g05190.1
  • symbol OsXRCC1
  • name X-ray repair cross complementing 1
  • uniprot Q5VQ75

Descriptions

  • Description Rice homologue of mammalian X-ray repair cross complementing 1 (XRCC1), DNA repair
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006284
IEA
GOA Databasebase-excision repair
GO:0006284
IEA
InterProbase-excision repair
GO:0006303
IEA
GOA Databasedouble-strand break repair via nonhomologous end joining
GO:0006303
IEA
InterProdouble-strand break repair via nonhomologous end joining
GO:0000012
IEA
GOA Databasesingle strand break repair
GO:0000012
IEA
InterProsingle strand break repair
GO:1901969
IEA
GOA Databasepositive regulation of polynucleotide 3'-phosphatase activity
GO:1901972
IEA
GOA Databasepositive regulation of DNA-5-methylcytosine glycosylase activity
GO:0080111
IEA
GOA DatabaseDNA demethylation
GO:0006266
IEA
GOA DatabaseDNA ligation

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003684
IEA
GOA Databasedamaged DNA binding
GO:0003684
IEA
InterProdamaged DNA binding
GO:0010385
IEA
GOA Databasedouble-stranded methylated DNA binding
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT1G80420

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR045080 XRCC1, first (central) BRCT domain
IPR036420 BRCT domain superfamily
IPR001357 BRCT domain
Mapman id Description
14.5.7 DNA damage response.base excision repair (BER).DNA repair protein (XRCC1)