Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro14959 Vaccinium macrocarpon HOM05D003686 ORTHO05D004322 4.0e-108 394.8 205 100.0
vmacro14957 Vaccinium macrocarpon HOM05D003686 ORTHO05D004322 2.3e-87 325.9 221 82.4
Rhsim13G0017700 Rhododendron simsii HOM05D003686 ORTHO05D004322 2.6e-43 179.5 226 52.7
vmacro17192 Vaccinium macrocarpon HOM05D003686 ORTHO05D004322 2.9e-42 176.0 206 55.3
Sabra03G0032800 Salix brachista HOM05D003686 ORTHO05D004322 6.7e-39 164.9 183 56.3
QL07p015848 Quercus lobata HOM05D003686 ORTHO05D004322 8.8e-39 164.5 210 48.1
Gohir.D11G123300 Gossypium hirsutum HOM05D003686 ORTHO05D004322 1.7e-37 160.2 209 46.4
Actinidia00703 Actinidia chinensis HOM05D003686 ORTHO05D004322 8.2e-37 157.9 209 51.2
Manes.01G213100 Manihot esculenta HOM05D003686 ORTHO05D004322 1.4e-36 157.1 213 47.4
TAR636G2878 Trochodendron aralioides HOM05D003686 ORTHO05D004322 2.4e-36 156.4 205 50.2
QL04p005272 Quercus lobata HOM05D003686 ORTHO05D004322 7.0e-36 154.8 210 46.2
TAR362G1277 Trochodendron aralioides HOM05D003686 ORTHO05D004322 7.0e-36 154.8 212 50.0
Glyma.10G021900 Glycine max HOM05D003686 ORTHO05D004322 4.5e-35 152.1 211 46.4
TAR365G0683 Trochodendron aralioides HOM05D003686 ORTHO05D004322 1.0e-34 151.0 205 48.3
Nn2g12370 Nelumbo nucifera HOM05D003686 ORTHO05D004322 1.3e-34 150.6 176 55.1
Potri.003G058400 Populus trichocarpa HOM05D003686 ORTHO05D004322 2.9e-34 149.4 212 47.6
COL.COLO4_08036 Corchorus olitorius HOM05D003686 ORTHO05D004322 3.8e-34 149.1 212 46.7
Atru.chr5.1287 Acer truncatum HOM05D003686 ORTHO05D004322 1.1e-33 147.5 211 48.8
Haze_04804 Corylus avellana HOM05D003686 ORTHO05D004322 2.5e-33 146.4 213 47.9
QL93p0358_0011 Quercus lobata HOM05D003686 ORTHO05D004322 1.6e-32 143.7 210 44.3
VMungo0720G0802 Vigna mungo HOM05D003686 ORTHO05D004322 1.0e-31 141.0 212 44.8
Gohir.A08G043900 Gossypium hirsutum HOM05D003686 ORTHO05D004322 1.4e-31 140.6 212 45.8
Eucgr.A00286 Eucalyptus grandis HOM05D003686 ORTHO05D004322 1.8e-31 140.2 212 44.8
Gorai.004G053600 Gossypium raimondii HOM05D003686 ORTHO05D004322 6.7e-31 138.3 212 45.3
CiPaw.07G099200 Carya illinoinensis HOM05D003686 ORTHO05D004322 4.4e-30 135.6 212 45.8
Lj2P1184T34 Lonicera japonica HOM05D003686 ORTHO05D004322 9.7e-30 134.4 181 49.2
Nn1g08910 Nelumbo nucifera HOM05D003686 ORTHO05D004322 9.7e-30 134.4 201 47.3
Cpa.g.sc9.157 Carica papaya HOM05D003686 ORTHO05D004322 2.8e-29 132.9 213 45.5
RcHm_v2.0_Chr6g0292481 Rosa chinensis HOM05D003686 ORTHO05D004322 2.8e-29 132.9 215 46.0
CANSAT78G2257 Cannabis sativa HOM05D003686 ORTHO05D004322 3.7e-29 132.5 223 44.8
TWI14G0352 Tripterygium wilfordii HOM05D003686 ORTHO05D004322 3.7e-29 132.5 210 43.8
Glyma.02G152300 Glycine max HOM05D003686 ORTHO05D004322 4.8e-29 132.1 211 43.6
DCAR_007018 Daucus carota HOM05D003686 ORTHO05D004322 6.3e-29 131.7 206 44.7
Aqoxy2G03146 Aquilegia oxysepala HOM05D003686 ORTHO05D004322 8.2e-29 131.3 199 46.7
Gohir.D08G053600 Gossypium hirsutum HOM05D003686 ORTHO05D004322 8.2e-29 131.3 212 43.9
Dinv11293 Davidia involucrata HOM05D003686 ORTHO05D004322 1.1e-28 131.0 207 44.4
Dinv11297 Davidia involucrata HOM05D003686 ORTHO05D004322 1.1e-28 131.0 207 44.4
Duzib133G0241 Durio zibethinus HOM05D003686 ORTHO05D004322 7.0e-28 128.3 212 42.5
Lsat_1_v5_gn_5_188760 Lactuca sativa HOM05D003686 ORTHO05D004322 2.7e-27 126.3 226 44.7
CSS0007511 Camellia sinensis var. sinensis HOM05D003686 ORTHO05D004322 7.7e-27 124.8 92 70.7
CSS0037271 Camellia sinensis var. sinensis HOM05D003686 ORTHO05D004322 7.7e-27 124.8 92 70.7
Lalb_Chr06g0163281 Lupinus albus HOM05D003686 ORTHO05D004322 1.0e-26 124.4 214 43.0
HanXRQChr11g0330151 Helianthus annuus HOM05D003686 ORTHO05D004322 2.5e-25 119.8 207 44.4
FAN24G2968 Fragaria x ananassa HOM05D003686 ORTHO05D004322 5.5e-25 118.6 186 47.8
Nitab4.5_0000295g0050 Nicotiana tabacum HOM05D003686 ORTHO05D004322 7.2e-25 118.2 207 42.5
Lalb_Chr02g0143061 Lupinus albus HOM05D003686 ORTHO05D004322 1.6e-24 117.1 214 43.0
Phvul.007G166600 Phaseolus vulgaris HOM05D003686 ORTHO05D004322 1.6e-24 117.1 209 40.7
PGSC0003DMG400021997 Solanum tuberosum HOM05D003686 ORTHO05D004322 2.1e-24 116.7 207 41.1
Solyc06g008860.3 Solanum lycopersicum HOM05D003686 ORTHO05D004322 2.7e-24 116.3 207 41.1
ATR0706G002 Amborella trichopoda HOM05D003686 ORTHO05D004322 3.6e-24 115.9 205 43.4
Lj1g0025208 Lotus japonicus HOM05D003686 ORTHO05D004322 3.6e-24 115.9 211 41.7
Nitab4.5_0004238g0080 Nicotiana tabacum HOM05D003686 ORTHO05D004322 3.6e-24 115.9 207 42.0
Psat6g168000 Pisum sativum HOM05D003686 ORTHO05D004322 3.6e-24 115.9 187 47.1
Ca_09109_v3 Cicer arietinum L. HOM05D003686 ORTHO05D004322 8.0e-24 114.8 180 43.9
ECA248G2178 Erigeron canadensis HOM05D003686 ORTHO05D004322 1.8e-23 113.6 143 50.3
PGR031G1643 Punica granatum HOM05D003686 ORTHO05D004322 2.3e-23 113.2 212 42.0
Sopen06g003610 Solanum pennellii HOM05D003686 ORTHO05D004322 2.3e-23 113.2 207 40.6
Gorai.007G132200 Gossypium raimondii HOM05D003686 ORTHO05D004322 4.0e-23 112.5 212 38.7
Cc01_g20160 Coffea canephora HOM05D003686 ORTHO05D004322 5.2e-23 112.1 222 41.4
GSVIVG01011011001 Vitis vinifera HOM05D003686 ORTHO05D004322 6.8e-23 111.7 161 47.8
Ca_10377_v3 Cicer arietinum L. HOM05D003686 ORTHO05D004322 8.8e-23 111.3 209 42.1
Ca_29655_v3 Cicer arietinum L. HOM05D003686 ORTHO05D004322 8.8e-23 111.3 209 42.1
Gohir.A11G118400 Gossypium hirsutum HOM05D003686 ORTHO05D004322 2.0e-22 110.2 212 37.7
Ciclev10022350m.g Citrus clementina HOM05D003686 ORTHO05D004322 2.6e-22 109.8 212 42.5
FAN15G3346 Fragaria x ananassa HOM05D003686 ORTHO05D004322 5.7e-22 108.6 186 45.7
FAN20G0133 Fragaria x ananassa HOM05D003686 ORTHO05D004322 5.7e-22 108.6 215 42.3
FAN20G1534 Fragaria x ananassa HOM05D003686 ORTHO05D004322 5.7e-22 108.6 186 45.7
FAN27G0391 Fragaria x ananassa HOM05D003686 ORTHO05D004322 5.7e-22 108.6 215 42.3
TPR.G15798 Trifolium pratense HOM05D003686 ORTHO05D004322 9.8e-22 107.8 225 40.4
MD03G1275200 Malus domestica HOM05D003686 ORTHO05D004322 1.3e-21 107.5 211 40.3
DCAR_012430 Daucus carota HOM05D003686 ORTHO05D004322 1.7e-21 107.1 211 39.8
Manes.05G068800 Manihot esculenta HOM05D003686 ORTHO05D004322 1.7e-21 107.1 213 42.3
FvH4_2g24650 Fragaria vesca HOM05D003686 ORTHO05D004322 2.2e-21 106.7 215 42.3
HanXRQChr01g0002781 Helianthus annuus HOM05D003686 ORTHO05D004322 2.8e-21 106.3 233 43.8
QL07p015856 Quercus lobata HOM05D003686 ORTHO05D004322 2.8e-21 106.3 202 38.1
Duzib138G0197 Durio zibethinus HOM05D003686 ORTHO05D004322 4.8e-21 105.5 211 39.3
QL93p0358_0018 Quercus lobata HOM05D003686 ORTHO05D004322 4.8e-21 105.5 202 38.1
TWI23G0547 Tripterygium wilfordii HOM05D003686 ORTHO05D004322 8.3e-21 104.8 211 40.8
CAN.G1006.23 Capsicum annuum HOM05D003686 ORTHO05D004322 2.4e-20 103.2 173 43.9
arahy.Tifrunner.gnm1.ann1.MV1AMG Arachis hypogaea HOM05D003686 ORTHO05D004322 4.1e-20 102.4 210 39.0
Lj5g0005016 Lotus japonicus HOM05D003686 ORTHO05D004322 4.1e-20 102.4 215 36.3
Peaxi162Scf00936g00218 Petunia axillaris HOM05D003686 ORTHO05D004322 4.5e-19 99.0 156 44.2
ECA247G2101 Erigeron canadensis HOM05D003686 ORTHO05D004322 5.9e-19 98.6 263 36.5
HPP92_021461 Vanilla planifolia HOM05D003686 ORTHO05D004322 7.7e-19 98.2 180 41.7
Sed0010038 Sechium edule HOM05D003686 ORTHO05D004322 1.0e-18 97.8 213 42.7
Migut.N00130 Erythranthe guttata HOM05D003686 ORTHO05D004322 2.3e-18 96.7 197 40.6
MD11G1297300 Malus domestica HOM05D003686 ORTHO05D004322 2.3e-18 96.7 210 38.1
Thecc.10G102800 Theobroma cacao HOM05D003686 ORTHO05D004322 2.3e-18 96.7 212 36.8
Hma1.2p1_0643F.1_g194695 Hydrangea macrophylla HOM05D003686 ORTHO05D004322 3.8e-18 95.9 169 42.0
Hma1.2p1_0643F.1_g194710 Hydrangea macrophylla HOM05D003686 ORTHO05D004322 3.8e-18 95.9 169 42.0
THA.LOC104826011 Tarenaya hassleriana HOM05D003686 ORTHO05D004322 3.8e-18 95.9 134 47.0
MSTRG.21821 Avicennia marina HOM05D003686 ORTHO05D004322 5.0e-18 95.5 177 40.7
Hma1.2p1_0643F.1_g194700 Hydrangea macrophylla HOM05D003686 ORTHO05D004322 8.6e-18 94.7 124 49.2
Hma1.2p1_0643F.1_g194711 Hydrangea macrophylla HOM05D003686 ORTHO05D004322 8.6e-18 94.7 124 49.2
arahy.Tifrunner.gnm1.ann1.TAZ1K7 Arachis hypogaea HOM05D003686 ORTHO05D004322 1.1e-17 94.4 181 39.8
SGA_v2.0_scaffold172G39059 Striga asiatica HOM05D003686 ORTHO05D004322 1.1e-17 94.4 177 42.9
Cfa010467 Carpinus fangiana HOM05D003686 ORTHO05D004322 1.9e-17 93.6 130 48.5
CSS0028767 Camellia sinensis var. sinensis HOM05D003686 ORTHO05D004322 2.5e-17 93.2 85 64.7
CSS0035418 Camellia sinensis var. sinensis HOM05D003686 ORTHO05D004322 2.5e-17 93.2 85 64.7
Eucgr.B02749 Eucalyptus grandis HOM05D003686 ORTHO05D004322 4.2e-17 92.4 214 38.3
ClCG09G006530 Citrullus lanatus HOM05D003686 ORTHO05D004322 4.7e-16 89.0 217 40.1
TPR.G18851 Trifolium pratense HOM05D004763 ORTHO05D007492 1.4e-15 87.4 242 36.4
THA.LOC104817532 Tarenaya hassleriana HOM05D003686 ORTHO05D004322 2.3e-15 86.7 146 45.9
Psat3g024960 Pisum sativum HOM05D003686 ORTHO05D004322 5.2e-15 85.5 174 38.5
unitig_61.g26148 Utricularia gibba HOM05D003686 ORTHO05D004322 5.2e-15 85.5 191 41.4
CiPaw.08G100800 Carya illinoinensis HOM05D003686 ORTHO05D004322 8.8e-15 84.7 210 36.7
Os02g0266100 Oryza sativa ssp. japonica HOM05D003686 ORTHO05D004322 1.2e-14 84.3 147 44.9
SGA_v2.0_scaffold36G14363 Striga asiatica HOM05D003686 ORTHO05D004322 1.2e-14 84.3 171 42.7
vmacro02511 Vaccinium macrocarpon HOM05D003686 ORTHO05D004322 1.2e-14 84.3 178 40.4
Solyc01g067830.3 Solanum lycopersicum HOM05D003686 ORTHO05D004322 2.0e-14 83.6 172 38.4
Duzib211G0369 Durio zibethinus HOM05D003686 ORTHO05D004322 2.6e-14 83.2 142 43.7
CsaV3_7G028310 Cucumis sativus L. HOM05D003686 ORTHO05D004322 7.5e-14 81.6 229 37.6
CDE11G0890 Ceratophyllum demersum HOM05D003686 ORTHO05D004322 9.8e-14 81.3 138 47.1
Peaxi162Scf01067g00002 Petunia axillaris HOM05D003686 ORTHO05D004322 8.3e-13 78.2 123 46.3
BraA02t07500Z Brassica rapa HOM05D003686 ORTHO05D004322 1.1e-12 77.8 155 41.3
MELO3C015891.2 Cucumis melo HOM05D003686 ORTHO05D004322 3.1e-12 76.3 229 36.7
Nitab4.5_0001624g0040 Nicotiana tabacum HOM05D003686 ORTHO05D004322 9.2e-12 74.7 150 40.7
CAN.G185.6 Capsicum annuum HOM05D003686 ORTHO05D004322 1.2e-11 74.3 210 34.3
Nitab4.5_0001149g0030 Nicotiana tabacum HOM05D003686 ORTHO05D004322 1.6e-11 73.9 170 38.2
Prupe.8G251800 Prunus persica HOM05D003686 ORTHO05D004322 1.6e-11 73.9 214 35.0
SalBow6G6913 Salvia bowleyana HOM05D003686 ORTHO05D004322 2.7e-11 73.2 206 38.3
SalBow8G5349 Salvia bowleyana HOM05D003686 ORTHO05D004322 2.7e-11 73.2 166 41.0
unitig_22.g6331 Utricularia gibba HOM05D003686 ORTHO05D004322 2.7e-11 73.2 126 42.9
EL10Ac2g03326 Beta vulgaris HOM05D003686 ORTHO05D004322 3.5e-11 72.8 227 34.8
COL.COLO4_34092 Corchorus olitorius HOM05D003686 ORTHO05D004322 4.5e-11 72.4 79 53.2
Zm00001eb203990 Zea mays HOM05D003686 ORTHO05D004322 4.5e-11 72.4 143 42.7
CSS0048633 Camellia sinensis var. sinensis HOM05D003686 ORTHO05D004322 5.9e-11 72.0 207 35.3
Hund24902 Selenicereus undatus HOM05D003686 ORTHO05D004322 7.8e-11 71.6 133 42.1
BcaC03g16209 Brassica carinata HOM05D003686 ORTHO05D004322 2.9e-10 69.7 180 37.8
BolC2t10013H Brassica oleracea HOM05D003686 ORTHO05D004322 2.9e-10 69.7 173 37.6
C03p37160 Brassica napus HOM05D003686 ORTHO05D004322 6.6e-10 68.6 133 38.3
Sp6g03160 Schrenkiella parvula HOM05D003686 ORTHO05D004322 8.6e-10 68.2 123 43.1
Oeu022800.1 Olea europaea HOM05D003686 ORTHO05D004322 1.5e-09 67.4 98 48.0
Oeu022802.1 Olea europaea HOM05D003686 ORTHO05D004322 1.5e-09 67.4 98 48.0
Sopen01g029780 Solanum pennellii HOM05D003686 ORTHO05D004322 1.5e-09 67.4 172 36.0
AUR62025901 Chenopodium quinoa HOM05D003686 ORTHO05D004322 2.5e-09 66.6 204 36.3
AUR62025902 Chenopodium quinoa HOM05D003686 ORTHO05D004322 2.5e-09 66.6 204 36.3
PSO801G0146 Papaver somniferum HOM05D003686 ORTHO05D004322 2.5e-09 66.6 198 35.9
AUR62029649 Chenopodium quinoa HOM05D003686 ORTHO05D004322 5.6e-09 65.5 203 34.5
Medtr1g088990 Medicago truncatula HOM05D003686 ORTHO05D004322 5.6e-09 65.5 219 35.2
BolC3t16013H Brassica oleracea HOM05D003686 ORTHO05D004322 7.3e-09 65.1 119 39.5
BcaB05g23688 Brassica carinata HOM05D003686 ORTHO05D004322 9.5e-09 64.7 125 40.0
BcaB05g23689 Brassica carinata HOM05D003686 ORTHO05D004322 9.5e-09 64.7 125 40.0
Sed0008045 Sechium edule HOM05D003686 ORTHO05D004322 9.5e-09 64.7 219 36.1
BcaB01g01979 Brassica carinata HOM05D003686 ORTHO05D004322 1.2e-08 64.3 189 34.4
BolC9t53184H Brassica oleracea HOM05D003686 ORTHO05D004322 1.2e-08 64.3 189 34.4
CARHR251560 Cardamine hirsuta HOM05D003686 ORTHO05D004322 1.2e-08 64.3 176 36.4
A09p02440 Brassica napus HOM05D003686 ORTHO05D004322 1.6e-08 63.9 229 32.3
C09p02540 Brassica napus HOM05D003686 ORTHO05D004322 1.6e-08 63.9 160 36.9
BraA09t35891Z Brassica rapa HOM05D003686 ORTHO05D004322 1.6e-08 63.9 229 32.3
Medtr7g107640 Medicago truncatula HOM05D003686 ORTHO05D004322 1.6e-08 63.9 188 33.5
BcaB01g02510 Brassica carinata HOM05D003686 ORTHO05D004322 2.1e-08 63.5 114 38.6
BcaC01g06704 Brassica carinata HOM05D003686 ORTHO05D004322 2.8e-08 63.2 114 38.6
Lj3A810T51 Lonicera japonica HOM05D003686 ORTHO05D004322 6.1e-08 62.0 148 41.2
Peaxi162Scf01364g00015 Petunia axillaris HOM05D003686 ORTHO05D004322 6.1e-08 62.0 70 48.6
AT4G03120 Arabidopsis thaliana HOM05D003686 ORTHO05D004322 8.0e-08 61.6 128 40.6
Mapoly0087s0074 Marchantia polymorpha HOM05D003686 ORTHO05D004322 1.0e-07 61.2 167 38.3
Migut.N02118 Erythranthe guttata HOM05D003686 ORTHO05D004322 1.4e-07 60.8 124 41.1
Migut.O00643 Erythranthe guttata HOM05D003686 ORTHO05D004322 1.4e-07 60.8 124 41.1
PGSC0003DMG400022854 Solanum tuberosum HOM05D003686 ORTHO05D004322 2.3e-07 60.1 181 31.5
MSTRG.12592 Avicennia marina HOM05D003686 ORTHO05D004322 4.0e-07 59.3 131 41.2
Sc25g0004660 Simmondsia chinensis HOM05D003686 ORTHO05D004322 8.9e-07 58.2 191 35.1
Ah.12g061550 Amaranthus hybridus HOM05D003686 ORTHO05D004322 1.2e-06 57.8 239 35.1
A03p30600 Brassica napus HOM05D003686 ORTHO05D004322 1.2e-06 57.8 206 31.1
BraA03t12240Z Brassica rapa HOM05D003686 ORTHO05D004322 1.2e-06 57.8 206 31.1
Pp3c12_26180 Physcomitrium patens HOM05D003686 ORTHO05D004322 1.5e-06 57.4 117 38.5
Mapoly0103s0046 Marchantia polymorpha HOM05D003686 ORTHO05D004322 2.0e-06 57.0 209 32.5
Lj5g0006065 Lotus japonicus HOM05D003686 ORTHO05D004322 5.7e-06 55.5 84 39.3


User provided reference genes

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