Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro05136 Vaccinium macrocarpon HOM05D005462 ORTHO05D006718 1.1e-86 323.2 158 100.0
Nitab4.5_0003787g0050 Nicotiana tabacum HOM05D005462 ORTHO05D006718 1.1e-36 157.1 129 62.8
Oeu033283.1 Olea europaea HOM05D005462 ORTHO05D006718 2.8e-32 142.5 112 63.4
Actinidia03844 Actinidia chinensis HOM05D005462 ORTHO05D006718 6.8e-23 111.3 72 79.2
Dinv08599 Davidia involucrata HOM05D005462 ORTHO05D006718 6.8e-23 111.3 70 78.6
Migut.F00860 Erythranthe guttata HOM05D005462 ORTHO05D006718 2.0e-22 109.8 75 73.3
MSTRG.27558 Avicennia marina HOM05D005462 ORTHO05D006718 2.6e-22 109.4 74 74.3
Lj2C34T7 Lonicera japonica HOM05D005462 ORTHO05D006718 3.4e-22 109.0 73 72.6
CSS0015574 Camellia sinensis var. sinensis HOM05D005462 ORTHO05D006718 1.3e-21 107.1 70 77.1
FAN06G4410 Fragaria x ananassa HOM05D005462 ORTHO05D006718 1.7e-21 106.7 72 72.2
FAN10G0457 Fragaria x ananassa HOM05D005462 ORTHO05D006718 1.7e-21 106.7 72 72.2
CANSAT56G2776 Cannabis sativa HOM05D005462 ORTHO05D006718 2.2e-21 106.3 73 71.2
FAN03G2522 Fragaria x ananassa HOM05D005462 ORTHO05D006718 2.2e-21 106.3 72 72.2
PGR142G1862 Punica granatum HOM05D005462 ORTHO05D006718 2.2e-21 106.3 73 71.2
ECA232G2701 Erigeron canadensis HOM05D005462 ORTHO05D006718 2.9e-21 105.9 74 68.9
QL04p046981 Quercus lobata HOM05D005462 ORTHO05D006718 2.9e-21 105.9 70 72.9
FvH4_7g06690 Fragaria vesca HOM05D005462 ORTHO05D006718 3.7e-21 105.5 72 72.2
Nn2g14251 Nelumbo nucifera HOM05D005462 ORTHO05D006718 4.9e-21 105.1 69 76.8
SalBow3G0159 Salvia bowleyana HOM05D005462 ORTHO05D006718 4.9e-21 105.1 74 71.6
Cpa.g.sc1114.1 Carica papaya HOM05D005462 ORTHO05D006718 6.4e-21 104.8 70 74.3
RcHm_v2.0_Chr1g0336351 Rosa chinensis HOM05D005462 ORTHO05D006718 6.4e-21 104.8 70 72.9
MBI01_g28355_MAGBIO Magnolia biondii HOM05D005462 ORTHO05D006718 8.3e-21 104.4 69 73.9
Cfa010538 Carpinus fangiana HOM05D005462 ORTHO05D006718 1.1e-20 104.0 70 74.3
Haze_03474 Corylus avellana HOM05D005462 ORTHO05D006718 1.1e-20 104.0 70 74.3
Eucgr.G02683 Eucalyptus grandis HOM05D005462 ORTHO05D006718 1.4e-20 103.6 70 71.4
Gohir.A13G009500 Gossypium hirsutum HOM05D005462 ORTHO05D006718 1.4e-20 103.6 70 72.9
Gohir.D13G010200 Gossypium hirsutum HOM05D005462 ORTHO05D006718 1.4e-20 103.6 70 72.9
Gorai.013G010900 Gossypium raimondii HOM05D005462 ORTHO05D006718 1.4e-20 103.6 70 72.9
Lsat_1_v5_gn_9_53421 Lactuca sativa HOM05D005462 ORTHO05D006718 1.4e-20 103.6 72 69.4
MD07G1061700 Malus domestica HOM05D005462 ORTHO05D006718 1.4e-20 103.6 72 70.8
TAR636G3557 Trochodendron aralioides HOM05D005462 ORTHO05D006718 1.4e-20 103.6 69 73.9
CiPaw.13G042600 Carya illinoinensis HOM05D005462 ORTHO05D006718 3.2e-20 102.4 70 71.4
Cc02_g09510 Coffea canephora HOM05D005462 ORTHO05D006718 3.2e-20 102.4 70 71.4
Thecc.10G115600 Theobroma cacao HOM05D005462 ORTHO05D006718 4.1e-20 102.1 70 71.4
CDE06G1106 Ceratophyllum demersum HOM05D005462 ORTHO05D006718 5.4e-20 101.7 72 69.4
Duzib128G2019 Durio zibethinus HOM05D005462 ORTHO05D006718 7.0e-20 101.3 70 71.4
GSVIVG01034651001 Vitis vinifera HOM05D005462 ORTHO05D006718 7.0e-20 101.3 72 68.1
Prupe.2G071400 Prunus persica HOM05D005462 ORTHO05D006718 1.2e-19 100.5 70 70.0
DCAR_028403 Daucus carota HOM05D005462 ORTHO05D006718 1.6e-19 100.1 70 70.0
Atru.chr12.1058 Acer truncatum HOM05D005462 ORTHO05D006718 2.0e-19 99.8 70 70.0
HanXRQChr11g0321471 Helianthus annuus HOM05D005462 ORTHO05D006718 2.0e-19 99.8 72 66.7
Medtr1g048080 Medicago truncatula HOM05D005462 ORTHO05D006718 2.0e-19 99.8 70 65.7
Nitab4.5_0001047g0040 Nicotiana tabacum HOM05D000001 ORTHO05D000003 2.7e-19 99.4 70 71.4
Peaxi162Scf00125g00414 Petunia axillaris HOM05D005462 ORTHO05D006718 2.7e-19 99.4 70 71.4
Sp6g38020 Schrenkiella parvula HOM05D005462 ORTHO05D006718 2.7e-19 99.4 72 69.4
Sed0013359 Sechium edule HOM05D005462 ORTHO05D006718 2.7e-19 99.4 72 72.2
TWI15G0792 Tripterygium wilfordii HOM05D005462 ORTHO05D006718 2.7e-19 99.4 72 68.1
Aqoxy4G02697 Aquilegia oxysepala HOM05D005462 ORTHO05D006718 3.5e-19 99.0 71 66.2
HanXRQChr11g0321421 Helianthus annuus HOM05D005462 ORTHO05D006718 3.5e-19 99.0 72 65.3
Potri.008G017400 Populus trichocarpa HOM05D005462 ORTHO05D006718 4.6e-19 98.6 70 71.4
Ca_13242_v3 Cicer arietinum L. HOM05D005462 ORTHO05D006718 6.0e-19 98.2 70 67.1
Ca_30156_v3 Cicer arietinum L. HOM05D005462 ORTHO05D006718 6.0e-19 98.2 70 67.1
SGA_v2.0_scaffold329G48874 Striga asiatica HOM05D005462 ORTHO05D006718 6.0e-19 98.2 72 66.7
THA.LOC104823152 Tarenaya hassleriana HOM05D005462 ORTHO05D006718 7.8e-19 97.8 72 65.3
BcaC06g32185 Brassica carinata HOM05D005462 ORTHO05D006718 1.0e-18 97.4 72 66.7
A10p31410 Brassica napus HOM05D005462 ORTHO05D006718 1.0e-18 97.4 72 66.7
C09p72080 Brassica napus HOM05D005462 ORTHO05D006718 1.0e-18 97.4 72 66.7
BolC9t59953H Brassica oleracea HOM05D005462 ORTHO05D006718 1.0e-18 97.4 72 66.7
BraA10t45187Z Brassica rapa HOM05D005462 ORTHO05D006718 1.0e-18 97.4 72 66.7
Lalb_Chr01g0010721 Lupinus albus HOM05D005462 ORTHO05D006718 1.3e-18 97.1 70 67.1
Sabra10G0188800 Salix brachista HOM05D005462 ORTHO05D006718 1.3e-18 97.1 70 70.0
Aa31LG11G5620 Aethionema arabicum HOM05D005462 ORTHO05D000003 1.7e-18 96.7 72 66.7
arahy.Tifrunner.gnm1.ann1.D9T4RB Arachis hypogaea HOM05D005462 ORTHO05D006718 1.7e-18 96.7 70 64.3
arahy.Tifrunner.gnm1.ann1.LTKS6Y Arachis hypogaea HOM05D005462 ORTHO05D006718 1.7e-18 96.7 70 64.3
CAN.G143.13 Capsicum annuum HOM05D005462 ORTHO05D006718 2.3e-18 96.3 70 68.6
Hund06792 Selenicereus undatus HOM05D005462 ORTHO05D006718 2.3e-18 96.3 69 71.0
Sc09g0005160 Simmondsia chinensis HOM05D005462 ORTHO05D006718 2.3e-18 96.3 70 71.4
Thhalv10012596m.g Eutrema salsugineum HOM05D005462 ORTHO05D006718 3.0e-18 95.9 72 65.3
Oeu033987.1 Olea europaea HOM05D005462 ORTHO05D006718 3.0e-18 95.9 69 71.0
EL10Ac3g07311 Beta vulgaris HOM05D005462 ORTHO05D006718 3.9e-18 95.5 70 67.1
Psat0s3982g0040 Pisum sativum HOM05D005462 ORTHO05D006718 3.9e-18 95.5 72 62.5
ClCG05G021870 Citrullus lanatus HOM05D005462 ORTHO05D006718 5.0e-18 95.1 72 70.8
Glyma.10G122100 Glycine max HOM05D005462 ORTHO05D006718 5.0e-18 95.1 69 65.2
AUR62018420 Chenopodium quinoa HOM05D005462 ORTHO05D006718 6.6e-18 94.7 70 67.1
AUR62021021 Chenopodium quinoa HOM05D005462 ORTHO05D006718 6.6e-18 94.7 70 67.1
PGSC0003DMG402007600 Solanum tuberosum HOM05D005462 ORTHO05D006718 6.6e-18 94.7 70 68.6
TPR.G19815 Trifolium pratense HOM05D005462 ORTHO05D006718 6.6e-18 94.7 70 64.3
AT5G04810 Arabidopsis thaliana HOM05D005462 ORTHO05D006718 8.6e-18 94.4 70 64.3
Potri.010G241300 Populus trichocarpa HOM05D005462 ORTHO05D006718 8.6e-18 94.4 69 69.6
Solyc11g006680.3 Solanum lycopersicum HOM05D005462 ORTHO05D006718 1.1e-17 94.0 70 68.6
Sopen11g002610 Solanum pennellii HOM05D005462 ORTHO05D006718 1.1e-17 94.0 70 68.6
HPP92_027469 Vanilla planifolia HOM05D005462 ORTHO05D006718 1.1e-17 94.0 72 66.7
MELO3C012341.2 Cucumis melo HOM05D005462 ORTHO05D006718 1.5e-17 93.6 70 71.4
AL6G14460 Arabidopsis lyrata HOM05D005462 ORTHO05D006718 2.5e-17 92.8 70 62.9
CsaV3_5G035270 Cucumis sativus L. HOM05D005462 ORTHO05D006718 2.5e-17 92.8 70 71.4
Lj6g0019256 Lotus japonicus HOM05D005462 ORTHO05D006718 2.5e-17 92.8 69 62.3
ATR0772G220 Amborella trichopoda HOM05D005462 ORTHO05D006718 5.6e-17 91.7 68 64.7
Glyma.20G074200 Glycine max HOM05D005462 ORTHO05D006718 7.3e-17 91.3 69 62.3
Sabra08G0010900 Salix brachista HOM05D005462 ORTHO05D006718 9.5e-17 90.9 69 68.1
Peaxi162Scf00195g01111 Petunia axillaris HOM05D005462 ORTHO05D006718 1.2e-16 90.5 70 68.6
Carub.0006s0369 Capsella rubella HOM05D005462 ORTHO05D006718 1.6e-16 90.1 70 62.9
CARHR208470 Cardamine hirsuta HOM05D005462 ORTHO05D006718 1.6e-16 90.1 70 62.9
PSO339G2458 Papaver somniferum HOM05D005462 ORTHO05D006718 1.6e-16 90.1 61 73.8
PSO384G2581 Papaver somniferum HOM05D005462 ORTHO05D006718 1.6e-16 90.1 61 73.8
vmacro07266 Vaccinium macrocarpon HOM05D005462 ORTHO05D006718 1.6e-16 90.1 59 81.4
PGSC0003DMG400016997 Solanum tuberosum HOM05D005462 ORTHO05D006718 4.7e-16 88.6 71 64.8
Ah.04g150500 Amaranthus hybridus HOM05D005462 ORTHO05D006718 6.2e-16 88.2 69 65.2
Solyc04g009730.4 Solanum lycopersicum HOM05D005462 ORTHO05D006718 1.1e-15 87.4 71 64.8
Sopen04g004840 Solanum pennellii HOM05D005462 ORTHO05D006718 1.1e-15 87.4 71 64.8
Manes.07G085300 Manihot esculenta HOM05D005462 ORTHO05D006718 1.4e-15 87.0 69 65.2
Phvul.007G234900 Phaseolus vulgaris HOM05D005462 ORTHO05D006718 1.4e-15 87.0 69 60.9
VMungo0720G0270 Vigna mungo HOM05D005462 ORTHO05D006718 1.4e-15 87.0 69 62.3
Zm00001eb434090 Zea mays HOM05D005462 ORTHO05D006718 2.6e-14 82.8 73 58.9
CAN.G186.57 Capsicum annuum HOM05D005462 ORTHO05D006718 3.4e-14 82.4 71 63.4
SEGI_04507 Sequoiadendron giganteum HOM05D005462 ORTHO05D006718 1.6e-08 63.5 73 41.1
HPP92_013817 Vanilla planifolia HOM05D005462 ORTHO05D006718 8.1e-08 61.2 40 77.5
Pp3c16_280 Physcomitrium patens HOM05D005462 ORTHO05D006718 6.8e-07 58.2 73 39.7
C09p30460 Brassica napus HOM05D003366 ORTHO05D004045 1.5e-06 57.0 41 70.7
BolC9t55910H Brassica oleracea HOM05D003366 ORTHO05D004045 7.6e-06 54.7 41 68.3


User provided reference genes

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