Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro03441 Vaccinium macrocarpon HOM05D005565 ORTHO05D006950 3.3e-237 824.7 431 100.0
vmacro00850 Vaccinium macrocarpon HOM05D002121 ORTHO05D004000 1.5e-88 330.9 210 76.7
vmacro03395 Vaccinium macrocarpon HOM05D005565 ORTHO05D006950 9.0e-86 321.6 175 100.0
Rhsim13G0120300 Rhododendron simsii HOM05D005565 ORTHO05D006950 9.1e-78 295.0 175 90.9
vmacro15102 Vaccinium macrocarpon HOM05D000113 ORTHO05D001798 2.0e-69 267.3 179 74.9
Glyma.07G224200 Glycine max HOM05D005565 ORTHO05D006950 1.7e-68 264.2 176 79.5
COL.COLO4_26828 Corchorus olitorius HOM05D005565 ORTHO05D006950 2.9e-68 263.5 169 81.7
Gorai.011G004100 Gossypium raimondii HOM05D005565 ORTHO05D006950 5.0e-68 262.7 169 81.1
Lj4g0020694 Lotus japonicus HOM05D005565 ORTHO05D006950 6.5e-68 262.3 169 81.1
Gohir.A10G003700 Gossypium hirsutum HOM05D005565 ORTHO05D006950 1.1e-67 261.5 169 80.5
VMungo0251G3128 Vigna mungo HOM05D005565 ORTHO05D006950 1.1e-67 261.5 169 80.5
Phvul.002G100900 Phaseolus vulgaris HOM05D005565 ORTHO05D006950 4.2e-67 259.6 172 79.1
arahy.Tifrunner.gnm1.ann1.V3UUHR Arachis hypogaea HOM05D005565 ORTHO05D006950 7.2e-67 258.8 172 80.8
Duzib192G0128 Durio zibethinus HOM05D005565 ORTHO05D006950 7.2e-67 258.8 169 79.9
Ca_18788_v3 Cicer arietinum L. HOM05D005565 ORTHO05D006950 2.1e-66 257.3 176 79.5
arahy.Tifrunner.gnm1.ann1.59WFQY Arachis hypogaea HOM05D005565 ORTHO05D006950 2.7e-66 256.9 172 80.2
Cpa.g.sc17.91 Carica papaya HOM05D005565 ORTHO05D006950 2.7e-66 256.9 169 81.1
FAN16G1178 Fragaria x ananassa HOM05D005565 ORTHO05D006950 2.7e-66 256.9 174 80.5
Medtr4g083380 Medicago truncatula HOM05D005565 ORTHO05D006950 2.7e-66 256.9 168 80.4
Actinidia13472 Actinidia chinensis HOM05D005565 ORTHO05D006950 3.6e-66 256.5 178 79.8
Dinv06439 Davidia involucrata HOM05D005565 ORTHO05D006950 3.6e-66 256.5 169 80.5
PSO675G3222 Papaver somniferum HOM05D005565 ORTHO05D006950 3.6e-66 256.5 172 79.1
PGR083G1318 Punica granatum HOM05D005565 ORTHO05D006950 3.6e-66 256.5 174 80.5
Atru.chr10.872 Acer truncatum HOM05D005565 ORTHO05D006950 6.1e-66 255.8 178 78.7
CSS0026797 Camellia sinensis var. sinensis HOM05D005565 ORTHO05D006950 6.1e-66 255.8 169 80.5
FAN21G3355 Fragaria x ananassa HOM05D005565 ORTHO05D006950 6.1e-66 255.8 170 80.6
MD10G1253700 Malus domestica HOM05D005565 ORTHO05D006950 8.0e-66 255.4 175 78.9
Thecc.06G001100 Theobroma cacao HOM05D005565 ORTHO05D006950 8.0e-66 255.4 169 80.5
CANSAT35G0106 Cannabis sativa HOM05D005565 ORTHO05D006950 1.0e-65 255.0 172 79.7
Nn3g20239 Nelumbo nucifera HOM05D005565 ORTHO05D006950 1.0e-65 255.0 176 79.5
Cfa000824 Carpinus fangiana HOM05D005565 ORTHO05D006950 1.4e-65 254.6 169 81.7
Glyma.20G024100 Glycine max HOM05D005565 ORTHO05D006950 1.4e-65 254.6 172 83.7
Prupe.4G089800 Prunus persica HOM05D005565 ORTHO05D006950 1.4e-65 254.6 168 81.0
ClCG01G025100 Citrullus lanatus HOM05D005565 ORTHO05D006950 1.8e-65 254.2 169 80.5
CsaV3_6G052300 Cucumis sativus L. HOM05D005565 ORTHO05D006950 1.8e-65 254.2 169 80.5
TWI53G0754 Tripterygium wilfordii HOM05D005565 ORTHO05D006950 2.3e-65 253.8 169 80.5
PSO541G0264 Papaver somniferum HOM05D005565 ORTHO05D006950 3.0e-65 253.4 172 78.5
Aqoxy1G01543 Aquilegia oxysepala HOM05D005565 ORTHO05D006950 3.9e-65 253.1 175 78.3
FvH4_3g10030 Fragaria vesca HOM05D005565 ORTHO05D006950 3.9e-65 253.1 170 80.0
FAN11G0475 Fragaria x ananassa HOM05D005565 ORTHO05D006950 3.9e-65 253.1 170 80.0
Psat7g132960 Pisum sativum HOM05D005565 ORTHO05D006950 6.7e-65 252.3 203 68.5
RcHm_v2.0_Chr5g0015891 Rosa chinensis HOM05D005565 ORTHO05D006950 6.7e-65 252.3 178 78.1
CiPaw.10G085900 Carya illinoinensis HOM05D005565 ORTHO05D006950 1.1e-64 251.5 169 80.5
Manes.06G055100 Manihot esculenta HOM05D005565 ORTHO05D006950 1.1e-64 251.5 169 79.3
Lj1A1162G46 Lonicera japonica HOM05D005565 ORTHO05D006950 1.5e-64 251.1 177 77.4
THA.LOC104812687 Tarenaya hassleriana HOM05D005565 ORTHO05D006950 2.0e-64 250.8 176 77.8
HPP92_019891 Vanilla planifolia HOM05D005565 ORTHO05D006950 2.6e-64 250.4 172 78.5
CANSAT35G0536 Cannabis sativa HOM05D005565 ORTHO05D006950 4.4e-64 249.6 172 78.5
QL05p061027 Quercus lobata HOM05D005565 ORTHO05D006950 4.4e-64 249.6 174 79.3
MD05G1274000 Malus domestica HOM05D005565 ORTHO05D006950 5.7e-64 249.2 175 76.6
Sc17g0004650 Simmondsia chinensis HOM05D005565 ORTHO05D006950 5.7e-64 249.2 185 74.6
SHI20681 Sapria himalayana HOM05D005565 ORTHO05D006950 7.4e-64 248.8 177 77.4
MBI10_g00722_MAGBIO Magnolia biondii HOM05D005565 ORTHO05D006950 9.7e-64 248.4 175 77.1
Potri.001G372600 Populus trichocarpa HOM05D005565 ORTHO05D006950 9.7e-64 248.4 170 79.4
Potri.011G098100 Populus trichocarpa HOM05D005565 ORTHO05D006950 9.7e-64 248.4 180 77.2
Hma1.2p1_0333F.1_g128300 Hydrangea macrophylla HOM05D005565 ORTHO05D006950 1.7e-63 247.7 172 76.7
Thhalv10007861m.g Eutrema salsugineum HOM05D005565 ORTHO05D006950 2.2e-63 247.3 173 76.9
Sed0002078 Sechium edule HOM05D005565 ORTHO05D006950 2.2e-63 247.3 168 78.6
TAR626G1362 Trochodendron aralioides HOM05D005565 ORTHO05D006950 2.8e-63 246.9 175 77.1
DCAR_027864 Daucus carota HOM05D005565 ORTHO05D006950 8.2e-63 245.4 163 79.8
SEGI_17605 Sequoiadendron giganteum HOM05D005565 ORTHO05D006950 1.4e-62 244.6 158 77.8
Manes.14G122600 Manihot esculenta HOM05D005565 ORTHO05D006950 1.8e-62 244.2 172 76.7
Lsat_1_v5_gn_1_117781 Lactuca sativa HOM05D005565 ORTHO05D006950 2.4e-62 243.8 169 76.9
CARHR029890 Cardamine hirsuta HOM05D005565 ORTHO05D006950 5.3e-62 242.7 171 77.8
C03p76800 Brassica napus HOM05D005565 ORTHO05D006950 7.0e-62 242.3 175 73.7
MELO3C007079.2 Cucumis melo HOM05D005565 ORTHO05D006950 7.0e-62 242.3 189 72.0
Sp1g26320 Schrenkiella parvula HOM05D005565 ORTHO05D006950 7.0e-62 242.3 173 75.7
AT1G30480 Arabidopsis thaliana HOM05D005565 ORTHO05D006950 9.1e-62 241.9 179 73.7
EL10Ac8g19576 Beta vulgaris HOM05D005565 ORTHO05D006950 9.1e-62 241.9 163 81.6
A08p24410 Brassica napus HOM05D005565 ORTHO05D006950 2.6e-61 240.4 175 73.1
Eucgr.D00186 Eucalyptus grandis HOM05D005565 ORTHO05D006950 2.6e-61 240.4 163 78.5
Sabra11G0084800 Salix brachista HOM05D005565 ORTHO05D006950 5.9e-61 239.2 205 68.3
Sabra11G0091000 Salix brachista HOM05D005565 ORTHO05D006950 5.9e-61 239.2 205 68.3
BolC3t19934H Brassica oleracea HOM05D005565 ORTHO05D006950 1.0e-60 238.4 175 72.6
Aa31LG6G11740 Aethionema arabicum HOM05D005565 ORTHO05D006950 1.3e-60 238.0 179 73.7
Carub.0001s2870 Capsella rubella HOM05D005565 ORTHO05D006950 1.7e-60 237.7 177 72.9
BcaNung05264 Brassica carinata HOM05D005565 ORTHO05D006950 2.2e-60 237.3 175 72.0
AL1G44510 Arabidopsis lyrata HOM05D005565 ORTHO05D006950 2.9e-60 236.9 167 77.2
Oeu041100.1 Olea europaea HOM05D005565 ORTHO05D006950 3.8e-60 236.5 177 72.9
BcaNung05265 Brassica carinata HOM05D005565 ORTHO05D006950 5.0e-60 236.1 160 76.2
ECA240G3173 Erigeron canadensis HOM05D005565 ORTHO05D006950 1.1e-59 235.0 160 78.8
Zm00001eb315350 Zea mays HOM05D005565 ORTHO05D006950 1.5e-59 234.6 177 71.2
ATR0165G027 Amborella trichopoda HOM05D005565 ORTHO05D006950 5.5e-59 232.6 154 78.6
BraA08t34396Z Brassica rapa HOM05D005565 ORTHO05D006950 5.5e-59 232.6 160 75.0
Cc09_g08070 Coffea canephora HOM05D005565 ORTHO05D006950 7.2e-59 232.3 175 73.1
Zm00001eb376390 Zea mays HOM05D005565 ORTHO05D006950 7.2e-59 232.3 177 71.2
MSTRG.14795 Avicennia marina HOM05D005565 ORTHO05D006950 2.7e-58 230.3 165 74.5
SGA_v2.0_scaffold223G42860 Striga asiatica HOM05D005565 ORTHO05D006950 3.6e-58 229.9 155 76.1
Mapoly0023s0048 Marchantia polymorpha HOM05D005565 ORTHO05D006950 2.3e-57 227.3 192 65.6
Oeu015183.1 Olea europaea HOM05D005565 ORTHO05D006950 3.0e-57 226.9 156 75.6
Rhsim05G0157800 Rhododendron simsii HOM05D000876 ORTHO05D000285 6.8e-57 225.7 213 57.7
unitig_21.g20207 Utricularia gibba HOM05D003481 ORTHO05D004001 3.4e-56 223.4 179 68.2
Os01g0526100 Oryza sativa ssp. japonica HOM05D005565 ORTHO05D006950 4.4e-56 223.0 177 68.9
GSVIVG01021628001 Vitis vinifera HOM05D005565 ORTHO05D006950 4.4e-56 223.0 137 84.7
Sabra16G0245100 Salix brachista HOM05D005565 ORTHO05D006950 5.7e-56 222.6 229 59.0
SGA_v2.0_scaffold1G00240 Striga asiatica HOM05D005565 ORTHO05D006950 9.8e-56 221.9 156 73.7
FAN25G2018 Fragaria x ananassa HOM05D005565 ORTHO05D006950 1.7e-55 221.1 152 77.6
CAN.G954.26 Capsicum annuum HOM05D005565 ORTHO05D006950 2.2e-55 220.7 172 69.2
Rhsim06G0093500 Rhododendron simsii HOM05D000876 ORTHO05D000285 2.8e-55 220.3 207 57.5
Rhsim10G0146900 Rhododendron simsii HOM05D000876 ORTHO05D000285 1.1e-54 218.4 207 57.0
Migut.H01333 Erythranthe guttata HOM05D005565 ORTHO05D006950 1.4e-54 218.0 156 71.8
Nitab4.5_0004596g0030 Nicotiana tabacum HOM05D005565 ORTHO05D006950 4.5e-53 213.0 182 67.6
A09p35980 Brassica napus HOM05D005565 ORTHO05D006950 1.7e-52 211.1 137 78.8
BraA09t39122Z Brassica rapa HOM05D005565 ORTHO05D006950 1.7e-52 211.1 137 78.8
PGSC0003DMG400021191 Solanum tuberosum HOM05D005565 ORTHO05D006950 2.2e-52 210.7 176 67.6
Sopen02g018950 Solanum pennellii HOM05D005565 ORTHO05D006950 3.8e-52 209.9 179 67.0
AagrBONN_evm.TU.Sc2ySwM_228.4814 Anthoceros agrestis HOM05D005565 ORTHO05D006950 5.0e-52 209.5 141 75.2
Solyc02g069790.3 Solanum lycopersicum HOM05D005565 ORTHO05D006950 6.5e-52 209.1 181 66.3
BcaB07g32657 Brassica carinata HOM05D005565 ORTHO05D006950 2.5e-51 207.2 137 77.4
C05p29480 Brassica napus HOM05D005565 ORTHO05D006950 2.5e-51 207.2 137 77.4
BolC5t31678H Brassica oleracea HOM05D005565 ORTHO05D006950 2.5e-51 207.2 137 77.4
AUR62042519 Chenopodium quinoa HOM05D005565 ORTHO05D006950 4.2e-51 206.5 165 69.7
Pp3c2_18610 Physcomitrium patens HOM05D005565 ORTHO05D006950 4.2e-51 206.5 176 64.2
Peaxi162Scf00670g00348 Petunia axillaris HOM05D005565 ORTHO05D006950 6.1e-50 202.6 163 69.3
Rhsim06G0024000 Rhododendron simsii HOM05D000876 ORTHO05D000285 1.4e-49 201.4 207 53.6
HanXRQChr01g0003371 Helianthus annuus HOM05D005565 ORTHO05D006950 6.8e-49 199.1 177 63.3
CBR_g29718 Chara braunii HOM05D005565 ORTHO05D006950 3.1e-46 190.3 177 61.6
SMO351G0200 Selaginella moellendorffii HOM05D005565 ORTHO05D006950 3.8e-44 183.3 134 68.7
Rhsim09G0041300 Rhododendron simsii HOM05D000876 ORTHO05D000285 2.0e-40 171.0 170 56.5
CDE10G1222 Ceratophyllum demersum HOM05D005565 ORTHO05D006950 1.7e-39 167.9 116 75.9
BcaB07g32683 Brassica carinata HOM05D005565 ORTHO05D006950 6.3e-39 166.0 137 66.4
BcaC01g00198 Brassica carinata HOM05D005565 ORTHO05D006950 6.3e-39 166.0 111 75.7
Rhsim04G0159900 Rhododendron simsii HOM05D000876 ORTHO05D000285 1.6e-34 151.4 205 45.4
Cre11.g467591 Chlamydomonas reinhardtii HOM05D005565 ORTHO05D006950 4.7e-34 149.8 142 54.2
Rhsim11G0045400 Rhododendron simsii HOM05D019962 ORTHO05D000285 4.7e-34 149.8 137 63.5
Lalb_Chr05g0219831 Lupinus albus HOM05D005565 ORTHO05D006950 1.2e-32 145.2 103 74.8
Gohir.D10G003700 Gossypium hirsutum HOM05D005565 ORTHO05D006950 1.5e-32 144.8 106 76.4
Haze_05807 Corylus avellana HOM05D005565 ORTHO05D006950 7.5e-32 142.5 112 74.1
MCO12G324 Micromonas commoda HOM05D005565 ORTHO05D006950 2.0e-29 134.4 173 42.2
Haze_26712 Corylus avellana HOM05D005565 ORTHO05D006950 7.8e-29 132.5 146 50.7
Dinv23083 Davidia involucrata HOM05D005565 ORTHO05D006950 3.0e-28 130.6 89 80.9
MBI18_g10581_MAGBIO Magnolia biondii HOM05D005565 ORTHO05D006950 7.3e-27 125.9 111 66.7
Haze_05809 Corylus avellana HOM05D005565 ORTHO05D006950 2.3e-25 120.9 67 85.1
CDE10G1151 Ceratophyllum demersum HOM05D005565 ORTHO05D006950 1.5e-24 118.2 66 84.8
Hma1.2p1_0333F.1_g128290 Hydrangea macrophylla HOM05D005565 ORTHO05D006950 5.8e-24 116.3 64 84.4
Rhsim09G0017300 Rhododendron simsii HOM05D019962 ORTHO05D000285 1.4e-22 111.7 106 58.5
BcaB07g32658 Brassica carinata HOM05D005565 ORTHO05D006950 1.9e-22 111.3 64 81.2
AUR62027340 Chenopodium quinoa HOM05D005565 ORTHO05D006950 3.2e-22 110.5 71 83.1
Nitab4.5_0002719g0090 Nicotiana tabacum HOM05D005565 ORTHO05D006950 3.5e-21 107.1 79 67.1
C07p15100 Brassica napus HOM05D005565 ORTHO05D006950 4.0e-17 93.6 65 70.8
CDE10G0349 Ceratophyllum demersum HOM05D005565 ORTHO05D006950 2.6e-16 90.9 66 77.3
CSS0033511 Camellia sinensis var. sinensis HOM05D000876 ORTHO05D000285 3.4e-16 90.5 204 31.9
CSS0021579 Camellia sinensis var. sinensis HOM05D000876 ORTHO05D000285 9.2e-14 82.4 196 32.1
PRCOL_00005056 Prasinoderma coloniale HOM05D005565 ORTHO05D006950 1.7e-12 78.2 183 37.2
CSS0010034 Camellia sinensis var. sinensis HOM05D000876 ORTHO05D000285 1.9e-11 74.7 203 30.5
CSS0048670 Camellia sinensis var. sinensis HOM05D000876 ORTHO05D000285 2.5e-11 74.3 185 30.3
CBR_g23080 Chara braunii HOM05D005565 ORTHO05D006950 1.2e-10 72.0 72 47.2
CSS0001395 Camellia sinensis var. sinensis HOM05D021170 ORTHO05D000285 1.6e-10 71.6 175 30.9
Rhsim06G0077800 Rhododendron simsii HOM05D000876 ORTHO05D000285 4.7e-10 70.1 59 54.2
CSS0024396 Camellia sinensis var. sinensis HOM05D021170 ORTHO05D000285 1.4e-09 68.6 186 31.2
Prupe.5G207000 Prunus persica HOM05D000876 ORTHO05D000285 1.4e-09 68.6 215 27.4
Prupe.5G020800 Prunus persica HOM05D000876 ORTHO05D000285 2.4e-09 67.8 215 27.0
MD15G1314200 Malus domestica HOM05D000876 ORTHO05D000285 5.8e-08 63.2 223 28.7
SGA_v2.0_scaffold273G46430 Striga asiatica HOM05D005565 ORTHO05D402892 4.9e-07 60.1 86 52.3
SGA_v2.0_scaffold74G24562 Striga asiatica HOM05D005565 ORTHO05D401758 1.4e-06 58.5 85 51.8
HanXRQChr14g0461341 Helianthus annuus HOM05D000876 ORTHO05D000285 4.2e-06 57.0 185 29.7


User provided reference genes

Program Settings