Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro02181 Vaccinium macrocarpon HOM05D006779 ORTHO05D008491 3.7e-180 634.8 329 100.0
Rhsim11G0168500 Rhododendron simsii HOM05D006779 ORTHO05D008491 1.0e-137 493.8 295 87.8
CSS0011815 Camellia sinensis var. sinensis HOM05D000591 ORTHO05D000579 3.4e-101 372.5 295 69.8
Actinidia00459 Actinidia chinensis HOM05D006779 ORTHO05D008491 1.8e-97 360.1 295 68.1
Dinv23582 Davidia involucrata HOM05D006779 ORTHO05D008491 2.1e-82 310.1 295 60.7
Dinv42131 Davidia involucrata HOM05D006779 ORTHO05D008491 4.8e-79 298.9 295 59.7
GSVIVG01031784001 Vitis vinifera HOM05D006779 ORTHO05D008491 1.9e-75 287.0 292 58.2
Nitab4.5_0004334g0110 Nicotiana tabacum HOM05D006779 ORTHO05D008491 1.2e-74 284.3 298 56.7
Oeu064516.1 Olea europaea HOM05D006779 ORTHO05D008491 4.6e-74 282.3 295 55.9
Haze_01903 Corylus avellana HOM05D006779 ORTHO05D008491 8.8e-73 278.1 293 55.3
QL11p037315 Quercus lobata HOM05D006779 ORTHO05D008491 8.8e-73 278.1 293 55.6
CiPaw.05G054000 Carya illinoinensis HOM05D006779 ORTHO05D008491 1.1e-72 277.7 293 56.0
Cc02_g18560 Coffea canephora HOM05D006779 ORTHO05D008491 9.7e-72 274.6 295 54.9
SGA_v2.0_scaffold90G27688 Striga asiatica HOM05D006779 ORTHO05D008491 1.7e-71 273.9 298 54.7
SGA_v2.0_scaffold90G27693 Striga asiatica HOM05D006779 ORTHO05D008491 1.7e-71 273.9 298 54.7
FAN24G0787 Fragaria x ananassa HOM05D006779 ORTHO05D008491 2.2e-71 273.5 293 54.3
PGSC0003DMG400025811 Solanum tuberosum HOM05D006779 ORTHO05D008491 2.2e-71 273.5 295 55.9
FAN20G2937 Fragaria x ananassa HOM05D006779 ORTHO05D008491 2.8e-71 273.1 293 54.3
FvH4_2g06680 Fragaria vesca HOM05D006779 ORTHO05D008491 3.7e-71 272.7 293 54.3
Solyc01g108430.3 Solanum lycopersicum HOM05D006779 ORTHO05D008491 4.8e-71 272.3 295 55.6
FAN15G3147 Fragaria x ananassa HOM05D006779 ORTHO05D008491 6.3e-71 271.9 293 53.9
Sopen01g050660 Solanum pennellii HOM05D006779 ORTHO05D008491 1.4e-70 270.8 295 55.3
MSTRG.16763 Avicennia marina HOM05D006779 ORTHO05D008491 3.1e-70 269.6 295 55.3
Migut.B00314 Erythranthe guttata HOM05D006779 ORTHO05D008491 3.1e-70 269.6 296 53.7
Sabra09G0080600 Salix brachista HOM05D006779 ORTHO05D008491 6.9e-70 268.5 295 54.9
Nitab4.5_0005583g0020 Nicotiana tabacum HOM05D006779 ORTHO05D008491 3.4e-69 266.2 298 54.4
Phvul.007G247000 Phaseolus vulgaris HOM05D006779 ORTHO05D008491 2.9e-68 263.1 292 54.5
Potri.009G105500 Populus trichocarpa HOM05D006779 ORTHO05D008491 3.8e-68 262.7 295 54.6
Thecc.02G097400 Theobroma cacao HOM05D006779 ORTHO05D008491 3.8e-68 262.7 292 55.5
RcHm_v2.0_Chr6g0258731 Rosa chinensis HOM05D006779 ORTHO05D008491 2.5e-67 260.0 293 52.2
Eucgr.I01169 Eucalyptus grandis HOM05D006779 ORTHO05D008491 7.2e-67 258.5 292 53.4
CAN.G322.16 Capsicum annuum HOM05D006779 ORTHO05D008491 1.2e-66 257.7 298 54.7
DCAR_029018 Daucus carota HOM05D000144 ORTHO05D003364 1.6e-66 257.3 302 51.7
TWI79G0004 Tripterygium wilfordii HOM05D006779 ORTHO05D008491 2.1e-66 256.9 297 53.2
MBI02_g21199_MAGBIO Magnolia biondii HOM05D006779 ORTHO05D008491 3.6e-66 256.1 329 48.9
CsaV3_7G008730 Cucumis sativus L. HOM05D006779 ORTHO05D008491 1.8e-65 253.8 293 51.9
Lj5C207T4 Lonicera japonica HOM05D006779 ORTHO05D008491 1.8e-65 253.8 296 53.0
Manes.15G142500 Manihot esculenta HOM05D006779 ORTHO05D008491 2.3e-65 253.4 295 51.5
Sed0011670 Sechium edule HOM05D006779 ORTHO05D008491 3.0e-65 253.1 293 53.2
SalBow6G0615 Salvia bowleyana HOM05D006779 ORTHO05D008491 3.9e-65 252.7 293 51.9
Sc18g0004890 Simmondsia chinensis HOM05D006779 ORTHO05D008491 1.1e-64 251.1 292 55.8
Prupe.8G119200 Prunus persica HOM05D006779 ORTHO05D008491 1.5e-64 250.8 293 51.2
Gohir.A03G191700 Gossypium hirsutum HOM05D006779 ORTHO05D008491 4.4e-64 249.2 293 52.2
MD05G1075500 Malus domestica HOM05D006779 ORTHO05D008491 7.4e-64 248.4 293 51.5
Gorai.005G240600 Gossypium raimondii HOM05D006779 ORTHO05D008491 9.7e-64 248.1 293 52.2
Glyma.01G146900 Glycine max HOM05D006779 ORTHO05D008491 1.3e-63 247.7 294 51.0
Glyma.10G112900 Glycine max HOM05D006779 ORTHO05D008491 1.3e-63 247.7 294 51.0
Gohir.D02G212600 Gossypium hirsutum HOM05D006779 ORTHO05D008491 1.3e-63 247.7 293 52.2
Lalb_Chr09g0328181 Lupinus albus HOM05D006779 ORTHO05D008491 1.7e-63 247.3 294 51.0
Nn5g30192 Nelumbo nucifera HOM05D006779 ORTHO05D008491 2.2e-63 246.9 293 52.6
PGR142G0644 Punica granatum HOM05D006779 ORTHO05D008491 2.2e-63 246.9 293 50.5
Atru.chr5.2773 Acer truncatum HOM05D006779 ORTHO05D008491 8.2e-63 245.0 297 51.2
TWI31G0027 Tripterygium wilfordii HOM05D006779 ORTHO05D008491 1.8e-62 243.8 299 50.8
Aqoxy6G01411 Aquilegia oxysepala HOM05D006779 ORTHO05D008491 5.3e-62 242.3 292 49.3
arahy.Tifrunner.gnm1.ann1.8ZG09Z Arachis hypogaea HOM05D006779 ORTHO05D008491 7.0e-62 241.9 294 52.4
Glyma.02G159500 Glycine max HOM05D006779 ORTHO05D008491 2.0e-61 240.4 294 49.7
Peaxi162Scf00016g01637 Petunia axillaris HOM05D006779 ORTHO05D008491 2.6e-61 240.0 280 52.9
Ciclev10029963m.g Citrus clementina HOM05D006779 ORTHO05D008491 3.4e-61 239.6 296 52.7
arahy.Tifrunner.gnm1.ann1.T066AP Arachis hypogaea HOM05D006779 ORTHO05D008491 7.7e-61 238.4 300 49.7
CANSAT25G0176 Cannabis sativa HOM05D006779 ORTHO05D008491 2.2e-60 236.9 295 49.8
ClCG02G005780 Citrullus lanatus HOM05D006779 ORTHO05D008491 8.5e-60 235.0 302 49.0
arahy.Tifrunner.gnm1.ann1.QJKD6Y Arachis hypogaea HOM05D006779 ORTHO05D008491 1.1e-59 234.6 296 50.0
COL.COLO4_32686 Corchorus olitorius HOM05D006779 ORTHO05D008491 1.1e-59 234.6 293 51.9
Lsat_1_v5_gn_5_113321 Lactuca sativa HOM05D006779 ORTHO05D008491 7.2e-59 231.9 299 49.5
ECA234G4762 Erigeron canadensis HOM05D006779 ORTHO05D008491 1.6e-58 230.7 296 48.6
HPP92_004257 Vanilla planifolia HOM05D006779 ORTHO05D008491 1.8e-57 227.3 294 48.0
HanXRQChr10g0303251 Helianthus annuus HOM05D006779 ORTHO05D008491 8.8e-57 224.9 295 48.5
Sp1g36470 Schrenkiella parvula HOM05D006779 ORTHO05D008491 2.6e-56 223.4 296 49.7
Aa31LG10G4420 Aethionema arabicum HOM05D006779 ORTHO05D008491 3.3e-56 223.0 294 48.3
Thhalv10011741m.g Eutrema salsugineum HOM05D006779 ORTHO05D008491 9.7e-56 221.5 296 49.3
Psat7g121840 Pisum sativum HOM05D006779 ORTHO05D008491 9.7e-56 221.5 296 47.0
AUR62034187 Chenopodium quinoa HOM05D006779 ORTHO05D008491 6.3e-55 218.8 293 50.2
Ca_18655_v3 Cicer arietinum L. HOM05D006779 ORTHO05D008491 1.8e-54 217.2 292 47.3
unitig_60.g25783 Utricularia gibba HOM05D006779 ORTHO05D008491 2.4e-54 216.9 295 48.5
EL10Ac3g06870 Beta vulgaris HOM05D006779 ORTHO05D008491 2.6e-53 213.4 292 49.3
BolC6t35591H Brassica oleracea HOM05D006779 ORTHO05D008491 3.8e-52 209.5 297 47.5
AUR62022456 Chenopodium quinoa HOM05D006779 ORTHO05D008491 3.8e-52 209.5 293 48.8
PSO541G4058 Papaver somniferum HOM05D006779 ORTHO05D008491 5.0e-52 209.1 295 47.1
AT1G49590 Arabidopsis thaliana HOM05D006779 ORTHO05D008491 6.5e-52 208.8 296 48.0
Carub.0001s3879 Capsella rubella HOM05D006779 ORTHO05D008491 2.5e-51 206.8 296 47.3
Ah.04g152710 Amaranthus hybridus HOM05D006779 ORTHO05D008491 4.2e-51 206.1 293 47.1
BraA06t23562Z Brassica rapa HOM05D006779 ORTHO05D008491 7.2e-51 205.3 298 47.0
A06p03540 Brassica napus HOM05D006779 ORTHO05D008491 4.7e-50 202.6 297 46.8
Lj4g0006122 Lotus japonicus HOM05D006779 ORTHO05D008491 6.1e-50 202.2 292 45.9
AL1G56960 Arabidopsis lyrata HOM05D006779 ORTHO05D008491 5.2e-49 199.1 296 45.6
PSO675G5018 Papaver somniferum HOM05D006779 ORTHO05D008491 8.8e-49 198.4 295 45.8
SHI05379 Sapria himalayana HOM05D006779 ORTHO05D008491 1.3e-47 194.5 297 45.1
Hund00325 Selenicereus undatus HOM05D006779 ORTHO05D008491 1.4e-46 191.0 292 44.5
BcaNung06359 Brassica carinata HOM05D006779 ORTHO05D008491 4.1e-46 189.5 297 43.1
Medtr4g086640 Medicago truncatula HOM05D006779 ORTHO05D008491 3.5e-45 186.4 295 43.1
CSS0024784 Camellia sinensis var. sinensis HOM05D006779 ORTHO05D008491 1.0e-44 184.9 228 51.3
CSS0021002 Camellia sinensis var. sinensis HOM05D006779 ORTHO05D008491 4.2e-43 179.5 228 50.4
CDE06G1966 Ceratophyllum demersum HOM05D006779 ORTHO05D008491 1.4e-41 174.5 293 41.6
MELO3C018438.2 Cucumis melo HOM05D006779 ORTHO05D008491 4.8e-39 166.0 250 45.6
Zm00001eb373090 Zea mays HOM05D006779 ORTHO05D008491 4.1e-38 162.9 295 40.0
Mapoly0157s0003 Marchantia polymorpha HOM05D006779 ORTHO05D008491 4.5e-37 159.5 311 37.9
FAN20G1913 Fragaria x ananassa HOM05D006779 ORTHO05D008491 3.8e-36 156.4 151 58.3
ATR0097G032 Amborella trichopoda HOM05D006779 ORTHO05D008491 5.0e-36 156.0 288 39.9
TAR628G0388 Trochodendron aralioides HOM05D006779 ORTHO05D008491 1.2e-34 151.4 96 80.2
Cpa.g.sc62.36 Carica papaya HOM05D006779 ORTHO05D008491 5.2e-33 146.0 105 72.4
C06p04620 Brassica napus HOM05D006779 ORTHO05D008491 1.7e-31 141.0 254 43.7
AagrBONN_evm.TU.Sc2ySwM_344.4302 Anthoceros agrestis HOM05D006779 ORTHO05D008491 3.7e-31 139.8 305 35.1
HPP92_004235 Vanilla planifolia HOM05D006779 ORTHO05D008491 1.8e-30 137.5 251 41.8
CSS0005405 Camellia sinensis var. sinensis HOM05D006779 ORTHO05D008491 4.5e-29 132.9 156 52.6
CSS0011003 Camellia sinensis var. sinensis HOM05D006779 ORTHO05D008491 4.5e-29 132.9 156 52.6
CSS0022737 Camellia sinensis var. sinensis HOM05D006779 ORTHO05D008491 7.8e-29 132.1 223 42.6
CSS0034996 Camellia sinensis var. sinensis HOM05D006779 ORTHO05D008491 1.3e-28 131.3 228 43.0
Pp3c14_26080 Physcomitrium patens HOM05D006779 ORTHO05D008491 3.8e-28 129.8 312 34.0
CARHR039640 Cardamine hirsuta HOM05D006779 ORTHO05D008491 1.5e-27 127.9 159 50.9
CBR_g17671 Chara braunii HOM05D006779 ORTHO05D008491 5.6e-27 125.9 344 33.4
SMO367G0139 Selaginella moellendorffii HOM05D006779 ORTHO05D008491 1.2e-26 124.8 302 33.8
TPR.G23531 Trifolium pratense HOM05D006779 ORTHO05D008491 5.8e-24 115.9 153 47.1
TPR.G23511 Trifolium pratense HOM05D006779 ORTHO05D008491 3.2e-22 110.2 66 80.3
Os06g0215200 Oryza sativa ssp. japonica HOM05D006779 ORTHO05D008491 4.1e-22 109.8 66 77.3
CDE03G0027 Ceratophyllum demersum HOM05D006779 ORTHO05D008491 5.2e-17 92.8 73 69.9
AUR62042088 Chenopodium quinoa HOM05D006779 ORTHO05D008491 3.4e-16 90.1 247 35.2
TAR628G1516 Trochodendron aralioides HOM05D006779 ORTHO05D008491 3.6e-10 70.1 121 43.0
Ah.08g219340 Amaranthus hybridus HOM05D006779 ORTHO05D008491 2.9e-07 60.5 96 42.7
EL10Ac9g20940 Beta vulgaris HOM05D002686 ORTHO05D003222 2.9e-07 60.5 61 62.3


User provided reference genes

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