Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_8.g4099 Utricularia gibba HOM05D002912 ORTHO05D003191 3.3e-58 228.0 105 100.0
Oeu026073.1 Olea europaea HOM05D002912 ORTHO05D003191 5.2e-19 97.8 52 80.8
GSVIVG01025581001 Vitis vinifera HOM05D002912 ORTHO05D003191 6.3e-17 90.9 54 77.8
Migut.J00390 Erythranthe guttata HOM05D002912 ORTHO05D003191 6.5e-14 80.9 37 100.0
unitig_16.g32856 Utricularia gibba HOM05D002912 ORTHO05D003191 6.5e-14 80.9 37 100.0
MSTRG.5705 Avicennia marina HOM05D002912 ORTHO05D003191 1.5e-13 79.7 37 97.3
MSTRG.19116 Avicennia marina HOM05D002912 ORTHO05D003191 1.9e-13 79.3 37 94.6
Aa31LG1G22180 Aethionema arabicum HOM05D002912 ORTHO05D003191 2.5e-13 79.0 45 80.0
Actinidia29197 Actinidia chinensis HOM05D002912 ORTHO05D003191 7.2e-13 77.4 47 78.7
Cc06_g03240 Coffea canephora HOM05D002912 ORTHO05D003191 7.2e-13 77.4 37 91.9
Haze_16967 Corylus avellana HOM05D002912 ORTHO05D003191 7.2e-13 77.4 72 59.7
ClCG02G013680 Citrullus lanatus HOM05D002912 ORTHO05D003191 2.1e-12 75.9 108 47.2
AL4G33720 Arabidopsis lyrata HOM05D002912 ORTHO05D003191 3.6e-12 75.1 45 77.8
ECA233G2654 Erigeron canadensis HOM05D002912 ORTHO05D003191 6.1e-12 74.3 37 89.2
Oeu029116.1 Olea europaea HOM05D002912 ORTHO05D003191 6.1e-12 74.3 37 89.2
HanXRQChr08g0219481 Helianthus annuus HOM05D002912 ORTHO05D003191 1.8e-11 72.8 37 86.5
Lj2C103T9 Lonicera japonica HOM05D002912 ORTHO05D003191 1.8e-11 72.8 87 49.4
Peaxi162Scf00597g00058 Petunia axillaris HOM05D002912 ORTHO05D003191 1.8e-11 72.8 76 56.6
DCAR_017750 Daucus carota HOM05D002912 ORTHO05D003191 3.0e-11 72.0 42 81.0
Oeu037763.2 Olea europaea HOM05D002912 ORTHO05D003191 4.0e-11 71.6 37 86.5
Oeu025612.1 Olea europaea HOM05D002912 ORTHO05D003191 5.2e-11 71.2 37 83.8
Lsat_1_v5_gn_2_115240 Lactuca sativa HOM05D002912 ORTHO05D003191 6.8e-11 70.9 46 71.7
ATR0681G041 Amborella trichopoda HOM05D002912 ORTHO05D003191 8.8e-11 70.5 37 86.5
CiPaw.09G185800 Carya illinoinensis HOM05D002912 ORTHO05D003191 1.2e-10 70.1 37 86.5
Haze_20697 Corylus avellana HOM05D002912 ORTHO05D003191 1.5e-10 69.7 46 71.7
Nitab4.5_0000643g0180 Nicotiana tabacum HOM05D002912 ORTHO05D003191 2.0e-10 69.3 37 83.8
Nitab4.5_0006252g0030 Nicotiana tabacum HOM05D000419 ORTHO05D000692 2.0e-10 69.3 37 83.8
SGA_v2.0_scaffold94G28645 Striga asiatica HOM05D002912 ORTHO05D003191 2.0e-10 69.3 37 89.2
Cfa017463 Carpinus fangiana HOM05D002912 ORTHO05D003191 2.6e-10 68.9 37 83.8
Gohir.A10G208800 Gossypium hirsutum HOM05D002912 ORTHO05D003191 2.6e-10 68.9 37 86.5
Gohir.D10G217100 Gossypium hirsutum HOM05D002912 ORTHO05D003191 2.6e-10 68.9 37 86.5
Gorai.011G242700 Gossypium raimondii HOM05D002912 ORTHO05D003191 2.6e-10 68.9 37 86.5
Aa31LG10G9630 Aethionema arabicum HOM05D002912 ORTHO05D003191 3.4e-10 68.6 68 57.4
Nitab4.5_0000914g0130 Nicotiana tabacum HOM05D002912 ORTHO05D003191 4.4e-10 68.2 37 89.2
Peaxi162Scf00015g00272 Petunia axillaris HOM05D002912 ORTHO05D003191 4.4e-10 68.2 37 89.2
Solyc05g054920.4 Solanum lycopersicum HOM05D002912 ORTHO05D003191 4.4e-10 68.2 37 89.2
Solyc09g005980.4 Solanum lycopersicum HOM05D002912 ORTHO05D003191 4.4e-10 68.2 37 81.1
Sopen05g033380 Solanum pennellii HOM05D002912 ORTHO05D003191 4.4e-10 68.2 37 89.2
PGSC0003DMG400023919 Solanum tuberosum HOM05D002912 ORTHO05D003191 4.4e-10 68.2 37 81.1
PGSC0003DMG402023504 Solanum tuberosum HOM05D002912 ORTHO05D003191 4.4e-10 68.2 37 89.2
DCAR_005061 Daucus carota HOM05D002912 ORTHO05D003191 5.7e-10 67.8 37 89.2
Lj1C929T9 Lonicera japonica HOM05D002912 ORTHO05D003191 5.7e-10 67.8 37 91.9
Lj8C93T4 Lonicera japonica HOM05D002912 ORTHO05D003191 5.7e-10 67.8 37 89.2
QL07p045981 Quercus lobata HOM05D002912 ORTHO05D003191 5.7e-10 67.8 37 81.1
Aqoxy4G03099 Aquilegia oxysepala HOM05D002912 ORTHO05D003191 7.5e-10 67.4 39 82.1
DCAR_009265 Daucus carota HOM05D002912 ORTHO05D003191 7.5e-10 67.4 37 83.8
Sabra06G0166100 Salix brachista HOM05D002912 ORTHO05D003191 7.5e-10 67.4 37 83.8
TAR636G0593 Trochodendron aralioides HOM05D002912 ORTHO05D003191 1.3e-09 66.6 37 86.5
Glyma.03G175400 Glycine max HOM05D002912 ORTHO05D003191 1.7e-09 66.2 37 83.8
Glyma.19G176100 Glycine max HOM05D002912 ORTHO05D003191 1.7e-09 66.2 37 83.8
Gohir.A05G343100 Gossypium hirsutum HOM05D002912 ORTHO05D003191 1.7e-09 66.2 37 83.8
Potri.006G215200 Populus trichocarpa HOM05D002912 ORTHO05D003191 1.7e-09 66.2 37 81.1
Potri.016G081700 Populus trichocarpa HOM05D002912 ORTHO05D003191 1.7e-09 66.2 37 81.1
Sabra16G0089500 Salix brachista HOM05D002912 ORTHO05D003191 1.7e-09 66.2 37 81.1
vmacro18962 Vaccinium macrocarpon HOM05D002912 ORTHO05D003191 1.7e-09 66.2 107 42.1
Sed0025451 Sechium edule HOM05D002912 ORTHO05D003191 2.2e-09 65.9 37 83.8
Hund22436 Selenicereus undatus HOM05D002912 ORTHO05D003191 2.2e-09 65.9 39 76.9
A03p20610 Brassica napus HOM05D002912 ORTHO05D003191 2.8e-09 65.5 37 81.1
C03p24210 Brassica napus HOM05D002912 ORTHO05D003191 2.8e-09 65.5 37 81.1
BolC3t14815H Brassica oleracea HOM05D002912 ORTHO05D003191 2.8e-09 65.5 37 81.1
BraA03t11303Z Brassica rapa HOM05D002912 ORTHO05D003191 2.8e-09 65.5 37 81.1
Cpa.g.sc114.20 Carica papaya HOM05D002912 ORTHO05D003191 2.8e-09 65.5 37 81.1
Thhalv10017989m.g Eutrema salsugineum HOM05D002912 ORTHO05D003191 2.8e-09 65.5 37 81.1
Lsat_1_v5_gn_1_54761 Lactuca sativa HOM05D002912 ORTHO05D003191 2.8e-09 65.5 37 83.8
Sp4g19660 Schrenkiella parvula HOM05D002912 ORTHO05D003191 2.8e-09 65.5 37 81.1
Os05g0120100 Oryza sativa ssp. japonica HOM05D002912 ORTHO05D003191 3.7e-09 65.1 37 86.5
Rhsim05G0184800 Rhododendron simsii HOM05D002912 ORTHO05D003191 3.7e-09 65.1 37 83.8
arahy.Tifrunner.gnm1.ann1.6ZDT16 Arachis hypogaea HOM05D002912 ORTHO05D003191 4.9e-09 64.7 37 83.8
arahy.Tifrunner.gnm1.ann1.U08GD1 Arachis hypogaea HOM05D002912 ORTHO05D003191 4.9e-09 64.7 37 83.8
A03p00880 Brassica napus HOM05D002912 ORTHO05D003191 4.9e-09 64.7 37 81.1
C03p01130 Brassica napus HOM05D002912 ORTHO05D003191 4.9e-09 64.7 37 81.1
BolC3t12672H Brassica oleracea HOM05D002912 ORTHO05D003191 4.9e-09 64.7 37 81.1
BraA03t09470Z Brassica rapa HOM05D002912 ORTHO05D003191 4.9e-09 64.7 37 81.1
Glyma.19G176200 Glycine max HOM05D002912 ORTHO05D003191 4.9e-09 64.7 37 83.8
Gorai.012G091800 Gossypium raimondii HOM05D002912 ORTHO05D003191 4.9e-09 64.7 37 81.1
Lj1g0023882 Lotus japonicus HOM05D002912 ORTHO05D003191 4.9e-09 64.7 37 83.8
PSO699G0046 Papaver somniferum HOM05D002912 ORTHO05D003191 4.9e-09 64.7 42 73.8
THA.LOC104806511 Tarenaya hassleriana HOM05D002912 ORTHO05D003191 4.9e-09 64.7 37 81.1
TPR.G36918 Trifolium pratense HOM05D002912 ORTHO05D003191 4.9e-09 64.7 37 83.8
ECA248G3238 Erigeron canadensis HOM05D002912 ORTHO05D003191 6.3e-09 64.3 37 81.1
Migut.L01640 Erythranthe guttata HOM05D002912 ORTHO05D003191 6.3e-09 64.3 37 83.8
MBI14_g22979_MAGBIO Magnolia biondii HOM05D002912 ORTHO05D003191 6.3e-09 64.3 37 83.8
Mapoly0052s0092 Marchantia polymorpha HOM05D002912 ORTHO05D003191 6.3e-09 64.3 37 81.1
THA.LOC104823247 Tarenaya hassleriana HOM05D002912 ORTHO05D003191 6.3e-09 64.3 37 81.1
A05p39460 Brassica napus HOM05D002912 ORTHO05D003191 8.3e-09 63.9 46 67.4
C05p58480 Brassica napus HOM05D002912 ORTHO05D003191 8.3e-09 63.9 46 67.4
BraA05t22727Z Brassica rapa HOM05D002912 ORTHO05D003191 8.3e-09 63.9 46 67.4
Ciclev10032170m.g Citrus clementina HOM05D002912 ORTHO05D003191 8.3e-09 63.9 37 81.1
Lj3C975T6 Lonicera japonica HOM05D002912 ORTHO05D003191 8.3e-09 63.9 37 83.8
TAR633G0383 Trochodendron aralioides HOM05D002912 ORTHO05D003191 8.3e-09 63.9 37 81.1
Aa31LG5G22680 Aethionema arabicum HOM05D002912 ORTHO05D003191 1.1e-08 63.5 37 81.1
AL5G34420 Arabidopsis lyrata HOM05D002912 ORTHO05D003191 1.1e-08 63.5 37 81.1
AT3G53500 Arabidopsis thaliana HOM05D002912 ORTHO05D003191 1.1e-08 63.5 37 81.1
CANSAT80G2852 Cannabis sativa HOM05D002912 ORTHO05D003191 1.1e-08 63.5 37 81.1
Carub.0005s2007 Capsella rubella HOM05D002912 ORTHO05D003191 1.1e-08 63.5 37 81.1
CARHR163400 Cardamine hirsuta HOM05D002912 ORTHO05D003191 1.1e-08 63.5 37 81.1
CARHR210700 Cardamine hirsuta HOM05D002912 ORTHO05D003191 1.1e-08 63.5 37 78.4
Duzib128G1379 Durio zibethinus HOM05D002912 ORTHO05D003191 1.1e-08 63.5 37 83.8
Thhalv10014414m.g Eutrema salsugineum HOM05D002912 ORTHO05D003191 1.1e-08 63.5 37 78.4
Gohir.D06G173700 Gossypium hirsutum HOM05D002912 ORTHO05D003191 1.1e-08 63.5 37 83.8
Gohir.D13G021300 Gossypium hirsutum HOM05D002912 ORTHO05D003191 1.1e-08 63.5 37 83.8
Gorai.010G203100 Gossypium raimondii HOM05D002912 ORTHO05D003191 1.1e-08 63.5 37 83.8
Gorai.013G024100 Gossypium raimondii HOM05D002912 ORTHO05D003191 1.1e-08 63.5 37 83.8
Lalb_Chr20g0113051 Lupinus albus HOM05D002912 ORTHO05D003191 1.1e-08 63.5 36 86.1
MD12G1131700 Malus domestica HOM05D002912 ORTHO05D003191 1.1e-08 63.5 37 81.1
GSVIVG01032633001 Vitis vinifera HOM05D002912 ORTHO05D003191 1.1e-08 63.5 37 83.8
Actinidia13846 Actinidia chinensis HOM05D002912 ORTHO05D003191 1.4e-08 63.2 37 83.8
A09p46490 Brassica napus HOM05D002912 ORTHO05D003191 1.4e-08 63.2 37 81.1
C08p28840 Brassica napus HOM05D002912 ORTHO05D003191 1.4e-08 63.2 37 81.1
BolC6t37329H Brassica oleracea HOM05D002912 ORTHO05D003191 1.4e-08 63.2 37 81.1
BolC8t50486H Brassica oleracea HOM05D002912 ORTHO05D003191 1.4e-08 63.2 37 81.1
BraA09t40114Z Brassica rapa HOM05D002912 ORTHO05D003191 1.4e-08 63.2 37 81.1
Carub.0003s0868 Capsella rubella HOM05D002912 ORTHO05D003191 1.4e-08 63.2 41 73.2
ECA238G4642 Erigeron canadensis HOM05D002912 ORTHO05D003191 1.4e-08 63.2 37 78.4
Os03g0285900 Oryza sativa ssp. japonica HOM05D002912 ORTHO05D003191 1.4e-08 63.2 37 81.1
BolC5t34499H Brassica oleracea HOM05D002912 ORTHO05D003191 1.8e-08 62.8 46 65.2
CiPaw.01G279300 Carya illinoinensis HOM05D002912 ORTHO05D003191 1.8e-08 62.8 37 81.1
CsaV3_5G006510 Cucumis sativus L. HOM05D002912 ORTHO05D003191 1.8e-08 62.8 37 81.1
Sp3g07940 Schrenkiella parvula HOM05D002912 ORTHO05D003191 1.8e-08 62.8 46 67.4
TWI53G0760 Tripterygium wilfordii HOM05D002912 ORTHO05D003191 1.8e-08 62.8 37 81.1
TWI74G0490 Tripterygium wilfordii HOM05D002912 ORTHO05D003191 1.8e-08 62.8 37 81.1
Carub.0004s1925 Capsella rubella HOM05D002912 ORTHO05D003191 2.4e-08 62.4 37 78.4
CARHR132250 Cardamine hirsuta HOM05D002912 ORTHO05D003191 2.4e-08 62.4 37 78.4
Duzib093G1184 Durio zibethinus HOM05D002912 ORTHO05D003191 2.4e-08 62.4 72 48.6
FAN09G4327 Fragaria x ananassa HOM05D002912 ORTHO05D003191 2.4e-08 62.4 38 73.7
TAR375G0384 Trochodendron aralioides HOM05D002912 ORTHO05D003191 2.4e-08 62.4 37 81.1
Actinidia19735 Actinidia chinensis HOM05D002912 ORTHO05D003191 3.1e-08 62.0 37 81.1
C06p21470 Brassica napus HOM05D002912 ORTHO05D003191 3.1e-08 62.0 37 78.4
BraA07t29849Z Brassica rapa HOM05D002912 ORTHO05D003191 3.1e-08 62.0 37 78.4
Dinv31388 Davidia involucrata HOM05D005234 ORTHO05D006583 3.1e-08 62.0 37 83.8
Duzib106G1529 Durio zibethinus HOM05D002912 ORTHO05D003191 3.1e-08 62.0 37 83.8
Duzib114G0437 Durio zibethinus HOM05D002912 ORTHO05D003191 3.1e-08 62.0 37 83.8
QL08p057485 Quercus lobata HOM05D002912 ORTHO05D003191 3.1e-08 62.0 37 78.4
Rhsim03G0125000 Rhododendron simsii HOM05D002912 ORTHO05D003191 3.1e-08 62.0 37 81.1
Sp5g08840 Schrenkiella parvula HOM05D002912 ORTHO05D003191 3.1e-08 62.0 37 78.4
Thecc.10G063400 Theobroma cacao HOM05D002912 ORTHO05D003191 3.1e-08 62.0 37 83.8
CDE09G1066 Ceratophyllum demersum HOM05D002912 ORTHO05D003191 4.1e-08 61.6 39 82.1
Cc02_g08690 Coffea canephora HOM05D002912 ORTHO05D003191 4.1e-08 61.6 37 81.1
Dinv35673 Davidia involucrata HOM05D000419 ORTHO05D000692 4.1e-08 61.6 37 81.1
Gohir.A06G177900 Gossypium hirsutum HOM05D002912 ORTHO05D003191 4.1e-08 61.6 37 81.1
Atru.chr12.597 Acer truncatum HOM05D002912 ORTHO05D003191 5.4e-08 61.2 37 75.7
Hma1.2p1_0348F.1_g131720 Hydrangea macrophylla HOM05D002912 ORTHO05D003191 5.4e-08 61.2 41 75.6
Nn2g10557 Nelumbo nucifera HOM05D002912 ORTHO05D003191 5.4e-08 61.2 37 78.4
COL.COLO4_05801 Corchorus olitorius HOM05D002912 ORTHO05D003191 7.0e-08 60.8 37 81.1
Os01g0155600 Oryza sativa ssp. japonica HOM05D002912 ORTHO05D003191 7.0e-08 60.8 35 77.1
THA.LOC104826998 Tarenaya hassleriana HOM05D002912 ORTHO05D003191 7.0e-08 60.8 37 81.1
HPP92_019806 Vanilla planifolia HOM05D002912 ORTHO05D003191 7.0e-08 60.8 37 81.1
CDE02G4187 Ceratophyllum demersum HOM05D002912 ORTHO05D003191 9.2e-08 60.5 39 79.5
FAN02G0443 Fragaria x ananassa HOM05D002912 ORTHO05D003191 9.2e-08 60.5 37 73.0
FAN05G5086 Fragaria x ananassa HOM05D002912 ORTHO05D003191 9.2e-08 60.5 38 71.1
RcHm_v2.0_Chr3g0468001 Rosa chinensis HOM05D002912 ORTHO05D003191 9.2e-08 60.5 37 73.0
Actinidia38227 Actinidia chinensis HOM05D002912 ORTHO05D003191 1.2e-07 60.1 37 78.4
Gohir.D01G207400 Gossypium hirsutum HOM05D002912 ORTHO05D003191 1.2e-07 60.1 41 70.7
Gorai.002G252500 Gossypium raimondii HOM05D002912 ORTHO05D003191 1.2e-07 60.1 41 70.7
Lalb_Chr06g0171181 Lupinus albus HOM05D002912 ORTHO05D003191 1.2e-07 60.1 37 78.4
Phvul.001G172700 Phaseolus vulgaris HOM05D002912 ORTHO05D003191 1.6e-07 59.7 37 75.7
RcHm_v2.0_Chr1g0364971 Rosa chinensis HOM05D002912 ORTHO05D003191 1.6e-07 59.7 37 78.4
CSS0023495 Camellia sinensis var. sinensis HOM05D002912 ORTHO05D003191 2.0e-07 59.3 37 75.7
CSS0037078 Camellia sinensis var. sinensis HOM05D002912 ORTHO05D003191 2.0e-07 59.3 37 75.7
Eucgr.G02779 Eucalyptus grandis HOM05D002912 ORTHO05D003191 2.0e-07 59.3 37 75.7
PSO339G4076 Papaver somniferum HOM05D002912 ORTHO05D003191 2.0e-07 59.3 43 72.1
PSO384G0018 Papaver somniferum HOM05D002912 ORTHO05D003191 2.0e-07 59.3 43 72.1
Sc20g0002330 Simmondsia chinensis HOM05D002912 ORTHO05D003191 2.0e-07 59.3 37 75.7
Zm00001eb265810 Zea mays HOM05D002912 ORTHO05D003191 2.0e-07 59.3 37 73.0
Zm00001eb265820 Zea mays HOM05D002912 ORTHO05D003191 2.0e-07 59.3 37 73.0
Ah.10g033180 Amaranthus hybridus HOM05D002912 ORTHO05D003191 2.7e-07 58.9 43 67.4
SEGI_01157 Sequoiadendron giganteum HOM05D002912 ORTHO05D003191 2.7e-07 58.9 37 73.0
CANSAT56G4039 Cannabis sativa HOM05D002912 ORTHO05D003191 3.5e-07 58.5 37 75.7
Lj1g0023413 Lotus japonicus HOM05D002912 ORTHO05D003191 3.5e-07 58.5 37 73.0
PGR044G0052 Punica granatum HOM05D002912 ORTHO05D003191 3.5e-07 58.5 37 78.4
Glyma.08G074602 Glycine max HOM05D002912 ORTHO05D003191 4.5e-07 58.2 37 78.4
Phvul.001G172600 Phaseolus vulgaris HOM05D002912 ORTHO05D003191 4.5e-07 58.2 37 75.7
Prupe.2G224200 Prunus persica HOM05D002912 ORTHO05D003191 4.5e-07 58.2 37 75.7
CBR_g39174 Chara braunii HOM05D002912 ORTHO05D003191 5.9e-07 57.8 37 73.0
PSO384G2378 Papaver somniferum HOM05D002912 ORTHO05D003191 5.9e-07 57.8 36 77.8
SMO119G0063 Selaginella moellendorffii HOM05D002912 ORTHO05D003191 7.7e-07 57.4 39 71.8
Gohir.A01G218600 Gossypium hirsutum HOM05D002912 ORTHO05D003191 1.0e-06 57.0 41 68.3
CSS0016616 Camellia sinensis var. sinensis HOM05D002912 ORTHO05D003191 1.3e-06 56.6 37 75.7
CSS0027380 Camellia sinensis var. sinensis HOM05D002912 ORTHO05D003191 1.3e-06 56.6 37 75.7
FvH4_7g20711 Fragaria vesca HOM05D002912 ORTHO05D003191 1.3e-06 56.6 37 75.7
FAN03G0311 Fragaria x ananassa HOM05D002912 ORTHO05D003191 1.3e-06 56.6 37 75.7
FAN06G4140 Fragaria x ananassa HOM05D005234 ORTHO05D006583 1.3e-06 56.6 37 75.7
FAN06G4823 Fragaria x ananassa HOM05D005234 ORTHO05D006583 1.3e-06 56.6 37 75.7
FAN10G0581 Fragaria x ananassa HOM05D005234 ORTHO05D006583 1.3e-06 56.6 37 75.7
VMungo1383G3127 Vigna mungo HOM05D002912 ORTHO05D003191 8.6e-06 53.9 37 70.3


User provided reference genes

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