Gene: Nitab4.5_0006252g0030
General Information
Structural Information
- Species Nicotiana tabacum
- Gene Identifier Nitab4.5_0006252g0030
- Transcript Identifier Nitab4.5_0006252g0030.1
- Gene Type Coding gene
- Location Nitab4.5_0006252 : 21479-28653 : positive
Gene Family Information
- ID HOM05D000419
- #Genes/#Species 1217/99
- Phylogenetic origin
- ID ORTHO05D000692
- #Genes/#Species 668/97
- Phylogenetic origin
Gene Duplication Information
- Block Duplication Block duplicate
Labels
Identifiers
- tid Nitab4.5_0006252g0030.1
- SR1-identifier Nta17g03170.1
Descriptions
- Description RNA recognition motif domain, Nucleotide-binding, alpha-beta plait, ABC-2 type transporter, P-loop containing nucleoside triphosphate hydrolase, ABC transporter, conserved site, AAA ATPase domain, ABC transporter-like
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:1903825 | ISO | PLAZA Integrative Orthology | organic acid transmembrane transport | AT3G53510 |
| GO:0010345 | ISO | PLAZA Integrative Orthology | suberin biosynthetic process | AT3G53510 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0003676 | IEA | InterPro | nucleic acid binding | |
| GO:0005524 | IEA | InterPro | ATP binding | |
| GO:0140359 | IEA | InterPro | ABC-type transporter activity |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0016020 | IEA | InterPro | membrane |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR027417 | P-loop containing nucleoside triphosphate hydrolase |
| IPR035979 | RNA-binding domain superfamily |
| IPR003439 | ABC transporter-like, ATP-binding domain |
| IPR000504 | RNA recognition motif domain |
| IPR003593 | AAA+ ATPase domain |
| IPR013525 | ABC-2 type transporter |
| IPR043926 | ABC transporter family G domain |
| IPR012677 | Nucleotide-binding alpha-beta plait domain superfamily |
| Mapman id | Description |
|---|---|
| 16.2.6.5 | RNA processing.pre-mRNA splicing.spliceosome-associated non-snRNP factor activities.splicing factor (RSZ32/33) |
| 24.1.3.2.2 | Solute transport.primary active transport.ABC superfamily.ABC2 family.subfamily ABCG transporter |