Gene: Nitab4.5_0000643g0180

General Information

Structural Information

  • Species Nicotiana tabacum
  • Gene Identifier Nitab4.5_0000643g0180
  • Transcript Identifier Nitab4.5_0000643g0180.1
  • Gene Type Coding gene
  • Location Nitab4.5_0000643 : 662206-665027 : positive

Gene Family Information

  • ID HOM05D002912
  • #Genes/#Species 237/96
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Nitab4.5_0000643g0180.1
  • SR1-identifier Nta18g03080.1

Descriptions

  • Description RNA recognition motif domain, Nucleotide-binding, alpha-beta plait
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0000245
ISO
PLAZA Integrative Orthologyspliceosomal complex assembly AT2G37340
GO:0000398
ISO
PLAZA Integrative OrthologymRNA splicing, via spliceosome AT3G53500

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003676
IEA
InterPronucleic acid binding
GO:0008270
ISO
PLAZA Homology (enrichment)zinc ion binding HOM05D002912
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT2G37340
GO:0003729
ISO
PLAZA Integrative OrthologymRNA binding AT3G53500

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0016607
ISO
PLAZA Integrative Orthologynuclear speck AT2G37340

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR000504 RNA recognition motif domain
IPR012677 Nucleotide-binding alpha-beta plait domain superfamily
IPR035979 RNA-binding domain superfamily
Mapman id Description
16.2.6.5 RNA processing.pre-mRNA splicing.spliceosome-associated non-snRNP factor activities.splicing factor (RSZ32/33)