Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_8.g3515 Utricularia gibba HOM05D003752 ORTHO05D004537 1.6e-127 459.9 322 100.0
unitig_22.g6030 Utricularia gibba HOM05D003752 ORTHO05D004537 2.7e-90 336.3 208 86.1
vmacro03080 Vaccinium macrocarpon HOM05D003752 ORTHO05D004537 1.3e-76 290.8 210 77.1
CSS0049967 Camellia sinensis var. sinensis HOM05D003752 ORTHO05D004537 6.3e-76 288.5 202 77.7
MSTRG.26108 Avicennia marina HOM05D003752 ORTHO05D004537 1.8e-75 287.0 218 73.9
MSTRG.26109 Avicennia marina HOM05D003752 ORTHO05D004537 1.8e-75 287.0 218 73.9
MSTRG.6451 Avicennia marina HOM05D003752 ORTHO05D004537 3.1e-75 286.2 198 80.3
PGR042G2871 Punica granatum HOM05D003752 ORTHO05D004537 7.0e-75 285.0 198 77.8
DCAR_014174 Daucus carota HOM05D003752 ORTHO05D004537 9.2e-75 284.6 212 72.2
SGA_v2.0_scaffold69G23094 Striga asiatica HOM05D003752 ORTHO05D004537 2.7e-74 283.1 214 77.1
SGA_v2.0_scaffold105G30451 Striga asiatica HOM05D003752 ORTHO05D004537 4.5e-74 282.3 207 77.3
Actinidia23948 Actinidia chinensis HOM05D003752 ORTHO05D004537 1.0e-73 281.2 246 67.9
Ca_03047_v3 Cicer arietinum L. HOM05D003752 ORTHO05D004537 2.9e-73 279.6 159 89.3
Sed0008799 Sechium edule HOM05D003752 ORTHO05D004537 5.0e-73 278.9 176 80.7
Oeu008124.1 Olea europaea HOM05D003752 ORTHO05D004537 6.6e-73 278.5 248 67.7
Rhsim11G0022000 Rhododendron simsii HOM05D003752 ORTHO05D004537 6.6e-73 278.5 211 75.4
Peaxi162Scf00036g00225 Petunia axillaris HOM05D003752 ORTHO05D004537 8.6e-73 278.1 209 74.6
Potri.016G041200 Populus trichocarpa HOM05D003752 ORTHO05D004537 8.6e-73 278.1 207 71.5
Nitab4.5_0003602g0040 Nicotiana tabacum HOM05D003752 ORTHO05D004537 1.5e-72 277.3 209 75.1
ECA232G3218 Erigeron canadensis HOM05D003752 ORTHO05D004537 2.5e-72 276.6 172 83.7
TPR.G21030 Trifolium pratense HOM05D003752 ORTHO05D004537 2.5e-72 276.6 162 86.4
COL.COLO4_34258 Corchorus olitorius HOM05D003752 ORTHO05D004537 4.3e-72 275.8 160 88.1
Thhalv10028535m.g Eutrema salsugineum HOM05D003752 ORTHO05D004537 4.3e-72 275.8 206 71.4
Carub.0005s2396 Capsella rubella HOM05D003752 ORTHO05D004537 7.3e-72 275.0 195 73.3
Cc05_g03890 Coffea canephora HOM05D003752 ORTHO05D004537 7.3e-72 275.0 146 93.8
Dinv03595 Davidia involucrata HOM05D003752 ORTHO05D004537 7.3e-72 275.0 161 87.0
Dinv01586 Davidia involucrata HOM05D003752 ORTHO05D004537 9.5e-72 274.6 163 87.1
Dinv16988 Davidia involucrata HOM05D003752 ORTHO05D004537 9.5e-72 274.6 163 87.1
Dinv42937 Davidia involucrata HOM05D003752 ORTHO05D004537 9.5e-72 274.6 163 87.1
Dinv43163 Davidia involucrata HOM05D003752 ORTHO05D004537 9.5e-72 274.6 163 87.1
SalBow6G1976 Salvia bowleyana HOM05D003752 ORTHO05D004537 9.5e-72 274.6 177 81.9
CSS0033883 Camellia sinensis var. sinensis HOM05D003752 ORTHO05D004537 1.2e-71 274.2 202 73.8
Manes.14G164400 Manihot esculenta HOM05D003752 ORTHO05D004537 1.6e-71 273.9 164 85.4
Ciclev10004588m.g Citrus clementina HOM05D003752 ORTHO05D004537 2.1e-71 273.5 198 73.7
Thhalv10029296m.g Eutrema salsugineum HOM05D003752 ORTHO05D004537 2.1e-71 273.5 231 68.0
VMungo0540G0784 Vigna mungo HOM05D003752 ORTHO05D004537 2.1e-71 273.5 159 86.2
EL10Ac7g16005 Beta vulgaris HOM05D003752 ORTHO05D004537 3.6e-71 272.7 161 83.9
Haze_02427 Corylus avellana HOM05D003752 ORTHO05D004537 3.6e-71 272.7 188 78.2
Nitab4.5_0003902g0040 Nicotiana tabacum HOM05D003752 ORTHO05D004537 3.6e-71 272.7 233 68.7
CARHR167330 Cardamine hirsuta HOM05D003752 ORTHO05D004537 4.7e-71 272.3 213 70.4
Lj2A1060T44 Lonicera japonica HOM05D003752 ORTHO05D004537 4.7e-71 272.3 160 88.1
MD16G1267700 Malus domestica HOM05D003752 ORTHO05D004537 4.7e-71 272.3 162 87.0
C06p24280 Brassica napus HOM05D003752 ORTHO05D004537 6.1e-71 271.9 203 71.9
PSO339G1844 Papaver somniferum HOM05D003752 ORTHO05D004537 6.1e-71 271.9 159 87.4
PSO384G2115 Papaver somniferum HOM05D003752 ORTHO05D004537 6.1e-71 271.9 159 87.4
Sabra16G0044000 Salix brachista HOM05D003752 ORTHO05D004537 6.1e-71 271.9 209 70.3
PSO339G6529 Papaver somniferum HOM05D003752 ORTHO05D004537 8.0e-71 271.6 164 84.1
QL07p048095 Quercus lobata HOM05D003752 ORTHO05D004537 8.0e-71 271.6 204 75.5
Sed0007232 Sechium edule HOM05D003752 ORTHO05D004537 8.0e-71 271.6 173 80.3
Glyma.08G176900 Glycine max HOM05D003752 ORTHO05D004537 1.0e-70 271.2 174 79.9
arahy.Tifrunner.gnm1.ann1.VI8ZWX Arachis hypogaea HOM05D003752 ORTHO05D004537 1.4e-70 270.8 168 82.7
A07p23280 Brassica napus HOM05D003752 ORTHO05D004537 1.4e-70 270.8 173 79.8
CsaV3_1G005920 Cucumis sativus L. HOM05D003752 ORTHO05D004537 1.4e-70 270.8 177 79.7
Migut.J01786 Erythranthe guttata HOM05D003752 ORTHO05D004537 1.4e-70 270.8 219 72.1
FAN13G2688 Fragaria x ananassa HOM05D003752 ORTHO05D004537 1.4e-70 270.8 147 90.5
MBI11_g44896_MAGBIO Magnolia biondii HOM05D003752 ORTHO05D004537 1.4e-70 270.8 215 69.8
Oeu018008.1 Olea europaea HOM05D003752 ORTHO05D004537 1.4e-70 270.8 145 91.7
Sabra16G0047400 Salix brachista HOM05D003752 ORTHO05D004537 1.4e-70 270.8 207 71.0
THA.LOC104803283 Tarenaya hassleriana HOM05D003752 ORTHO05D004537 1.4e-70 270.8 147 90.5
Thecc.05G143200 Theobroma cacao HOM05D003752 ORTHO05D004537 1.4e-70 270.8 160 87.5
HPP92_026052 Vanilla planifolia HOM05D003752 ORTHO05D004537 1.4e-70 270.8 235 65.1
BcaB02g07617 Brassica carinata HOM05D003752 ORTHO05D004537 1.8e-70 270.4 203 71.4
MELO3C002022.2 Cucumis melo HOM05D003752 ORTHO05D004537 1.8e-70 270.4 177 79.7
Duzib128G1024 Durio zibethinus HOM05D003752 ORTHO05D004537 1.8e-70 270.4 155 90.3
Manes.06G013600 Manihot esculenta HOM05D003752 ORTHO05D004537 1.8e-70 270.4 171 82.5
PGR142G3112 Punica granatum HOM05D003752 ORTHO05D004537 1.8e-70 270.4 179 79.9
BcaC03g16360 Brassica carinata HOM05D003752 ORTHO05D004537 2.3e-70 270.0 216 69.0
C02p41830 Brassica napus HOM05D003752 ORTHO05D004537 2.3e-70 270.0 216 69.0
BraA07t29994Z Brassica rapa HOM05D003752 ORTHO05D004537 2.3e-70 270.0 173 79.8
ECA238G3530 Erigeron canadensis HOM05D003752 ORTHO05D004537 2.3e-70 270.0 166 84.9
MBI11_g33762_MAGBIO Magnolia biondii HOM05D003752 ORTHO05D004537 2.3e-70 270.0 160 85.0
Medtr4g074160 Medicago truncatula HOM05D003752 ORTHO05D004537 2.3e-70 270.0 201 74.6
THA.LOC104816817 Tarenaya hassleriana HOM05D003752 ORTHO05D004537 2.3e-70 270.0 174 80.5
Atru.chr1.1259 Acer truncatum HOM05D003752 ORTHO05D004537 4.0e-70 269.2 156 87.2
AT3G57150 Arabidopsis thaliana HOM05D003752 ORTHO05D004537 4.0e-70 269.2 169 80.5
CANSAT78G1620 Cannabis sativa HOM05D003752 ORTHO05D004537 4.0e-70 269.2 193 75.1
Lsat_1_v5_gn_2_87640 Lactuca sativa HOM05D003752 ORTHO05D004537 4.0e-70 269.2 169 83.4
Prupe.5G050000 Prunus persica HOM05D003752 ORTHO05D004537 4.0e-70 269.2 145 92.4
BolC6t37580H Brassica oleracea HOM05D003752 ORTHO05D004537 5.2e-70 268.9 176 78.4
CAN.G809.54 Capsicum annuum HOM05D003752 ORTHO05D004537 5.2e-70 268.9 196 77.6
Haze_20773 Corylus avellana HOM05D003752 ORTHO05D004537 5.2e-70 268.9 145 92.4
FvH4_5g20900 Fragaria vesca HOM05D003752 ORTHO05D004537 5.2e-70 268.9 147 90.5
FAN08G2370 Fragaria x ananassa HOM05D003752 ORTHO05D004537 5.2e-70 268.9 147 90.5
FAN18G0564 Fragaria x ananassa HOM05D003752 ORTHO05D004537 5.2e-70 268.9 147 90.5
Glyma.15G056100 Glycine max HOM05D003752 ORTHO05D004537 5.2e-70 268.9 147 89.1
Gohir.A09G119600 Gossypium hirsutum HOM05D003752 ORTHO05D004537 5.2e-70 268.9 145 92.4
Lj6g0020967 Lotus japonicus HOM05D003752 ORTHO05D004537 5.2e-70 268.9 145 91.7
MBI11_g39266_MAGBIO Magnolia biondii HOM05D003752 ORTHO05D004537 5.2e-70 268.9 145 91.7
BcaC08g44828 Brassica carinata HOM05D003752 ORTHO05D004537 6.8e-70 268.5 176 78.4
A02p26300 Brassica napus HOM05D003752 ORTHO05D004537 6.8e-70 268.5 215 68.8
BraA02t07631Z Brassica rapa HOM05D003752 ORTHO05D004537 6.8e-70 268.5 215 68.8
CANSAT11G0989 Cannabis sativa HOM05D003752 ORTHO05D004537 6.8e-70 268.5 148 87.8
Cfa017397 Carpinus fangiana HOM05D003752 ORTHO05D004537 6.8e-70 268.5 238 68.1
Gohir.D09G115800 Gossypium hirsutum HOM05D003752 ORTHO05D004537 6.8e-70 268.5 158 87.3
Gorai.006G134100 Gossypium raimondii HOM05D003752 ORTHO05D004537 6.8e-70 268.5 158 87.3
Lsat_1_v5_gn_4_170400 Lactuca sativa HOM05D003752 ORTHO05D004537 6.8e-70 268.5 152 90.1
RcHm_v2.0_Chr7g0207911 Rosa chinensis HOM05D003752 ORTHO05D004537 6.8e-70 268.5 145 91.7
TWI53G1524 Tripterygium wilfordii HOM05D003752 ORTHO05D004537 8.9e-70 268.1 172 80.2
Phvul.006G203800 Phaseolus vulgaris HOM05D003752 ORTHO05D004537 1.2e-69 267.7 147 89.1
Sc09g0009000 Simmondsia chinensis HOM05D003752 ORTHO05D004537 1.2e-69 267.7 144 91.7
THA.LOC104824422 Tarenaya hassleriana HOM05D003752 ORTHO05D004537 1.2e-69 267.7 145 91.7
AL5G38630 Arabidopsis lyrata HOM05D003752 ORTHO05D004537 1.5e-69 267.3 161 81.4
Eucgr.E03348 Eucalyptus grandis HOM05D003752 ORTHO05D004537 1.5e-69 267.3 170 81.2
TAR623G0355 Trochodendron aralioides HOM05D003752 ORTHO05D004537 1.5e-69 267.3 164 84.1
CiPaw.09G191400 Carya illinoinensis HOM05D003752 ORTHO05D004537 2.0e-69 266.9 145 90.3
TAR369G0444 Trochodendron aralioides HOM05D003752 ORTHO05D004537 2.0e-69 266.9 145 91.0
Duzib106G0564 Durio zibethinus HOM05D003752 ORTHO05D004537 2.6e-69 266.5 157 87.3
FAN04G1343 Fragaria x ananassa HOM05D003752 ORTHO05D004537 2.6e-69 266.5 147 89.8
TWI74G0240 Tripterygium wilfordii HOM05D003752 ORTHO05D004537 2.6e-69 266.5 172 80.2
DCAR_020218 Daucus carota HOM05D003752 ORTHO05D004537 3.4e-69 266.2 214 72.4
Sabra06G0030400 Salix brachista HOM05D003752 ORTHO05D004537 3.4e-69 266.2 207 67.6
BcaB05g23842 Brassica carinata HOM05D003752 ORTHO05D004537 4.4e-69 265.8 174 79.3
GSVIVG01034188001 Vitis vinifera HOM05D003752 ORTHO05D004537 5.7e-69 265.4 145 90.3
Lalb_Chr15g0090361 Lupinus albus HOM05D003752 ORTHO05D004537 7.5e-69 265.0 159 85.5
MD06G1043100 Malus domestica HOM05D003752 ORTHO05D004537 9.8e-69 264.6 206 74.8
QL05p081022 Quercus lobata HOM05D003752 ORTHO05D004537 9.8e-69 264.6 145 89.7
HPP92_013499 Vanilla planifolia HOM05D003752 ORTHO05D004537 9.8e-69 264.6 235 64.3
Lalb_Chr20g0122851 Lupinus albus HOM05D003752 ORTHO05D004537 1.3e-68 264.2 175 80.0
SEGI_15035 Sequoiadendron giganteum HOM05D003752 ORTHO05D004537 1.3e-68 264.2 148 87.8
ATR0582G074 Amborella trichopoda HOM05D003752 ORTHO05D004537 1.7e-68 263.8 157 84.7
HanXRQChr14g0450101 Helianthus annuus HOM05D003752 ORTHO05D004537 1.7e-68 263.8 170 81.2
Aqoxy2G02099 Aquilegia oxysepala HOM05D003752 ORTHO05D004537 2.2e-68 263.5 151 88.1
Prupe.1G572500 Prunus persica HOM05D003752 ORTHO05D004537 2.9e-68 263.1 145 91.0
Zm00001eb127780 Zea mays HOM05D003752 ORTHO05D004537 2.9e-68 263.1 147 89.1
SHI24589 Sapria himalayana HOM05D003752 ORTHO05D004537 3.7e-68 262.7 169 80.5
Os03g0370500 Oryza sativa ssp. japonica HOM05D003752 ORTHO05D004537 4.9e-68 262.3 147 87.8
Zm00001eb328640 Zea mays HOM05D003752 ORTHO05D004537 4.9e-68 262.3 147 88.4
SEGI_22907 Sequoiadendron giganteum HOM05D003752 ORTHO05D004537 6.4e-68 261.9 168 80.4
SEGI_34651 Sequoiadendron giganteum HOM05D003752 ORTHO05D004537 6.4e-68 261.9 168 80.4
HPP92_001952 Vanilla planifolia HOM05D003752 ORTHO05D004537 6.4e-68 261.9 141 92.2
ClCG04G011850 Citrullus lanatus HOM05D003752 ORTHO05D004537 1.1e-67 261.2 172 79.1
Potri.006G044100 Populus trichocarpa HOM05D003752 ORTHO05D004537 1.1e-67 261.2 213 70.4
Os07g0636000 Oryza sativa ssp. japonica HOM05D003752 ORTHO05D004537 1.4e-67 260.8 171 79.5
Zm00001eb333520 Zea mays HOM05D003752 ORTHO05D004537 1.8e-67 260.4 147 87.8
Sopen02g026410 Solanum pennellii HOM05D003752 ORTHO05D004537 2.4e-67 260.0 235 67.7
TAR625G1316 Trochodendron aralioides HOM05D003752 ORTHO05D004537 2.4e-67 260.0 211 69.7
Solyc02g081810.4 Solanum lycopersicum HOM05D003752 ORTHO05D004537 5.4e-67 258.8 235 68.5
MD16G1267900 Malus domestica HOM05D003752 ORTHO05D004537 7.0e-67 258.5 135 95.6
Oeu033774.1 Olea europaea HOM05D003752 ORTHO05D004537 1.2e-66 257.7 213 67.6
Psat7g173920 Pisum sativum HOM05D003752 ORTHO05D004537 7.8e-66 255.0 146 89.0
PGSC0003DMG400007315 Solanum tuberosum HOM05D003752 ORTHO05D004537 1.0e-65 254.6 213 70.4
Aa31LG10G12050 Aethionema arabicum HOM05D003752 ORTHO05D004537 1.7e-65 253.8 186 72.6
Nn3g18377 Nelumbo nucifera HOM05D003752 ORTHO05D004537 5.0e-65 252.3 200 69.0
Ah.01g021060 Amaranthus hybridus HOM05D003752 ORTHO05D004537 7.3e-64 248.4 152 82.2
Mapoly0138s0004 Marchantia polymorpha HOM05D003752 ORTHO05D004537 4.4e-61 239.2 152 79.6
AagrBONN_evm.TU.Sc2ySwM_117.2275 Anthoceros agrestis HOM05D003752 ORTHO05D004537 3.2e-59 233.0 224 60.3
CSS0045812 Camellia sinensis var. sinensis HOM05D003752 ORTHO05D004537 6.0e-58 228.8 202 63.9
CSS0047163 Camellia sinensis var. sinensis HOM05D003752 ORTHO05D004537 6.0e-58 228.8 202 63.9
CBR_g3460 Chara braunii HOM05D003752 ORTHO05D004537 1.0e-57 228.0 182 66.5
Pp3c22_190 Physcomitrium patens HOM05D003752 ORTHO05D004537 8.6e-57 224.9 206 63.1
Pp3c22_210 Physcomitrium patens HOM05D003752 ORTHO05D004537 8.6e-57 224.9 206 63.1
MCO13G432 Micromonas commoda HOM05D003752 ORTHO05D004537 1.2e-55 221.1 165 71.5
Cre03.g172950 Chlamydomonas reinhardtii HOM05D003752 ORTHO05D004537 8.1e-55 218.4 130 80.8
SMO356G0031 Selaginella moellendorffii HOM05D003752 ORTHO05D004537 1.4e-54 217.6 142 76.8
CDE02G1601 Ceratophyllum demersum HOM05D003752 ORTHO05D004537 2.3e-54 216.9 118 89.8
PRCOL_00003441 Prasinoderma coloniale HOM05D003752 ORTHO05D004537 2.3e-54 216.9 138 79.0
AUR62020969 Chenopodium quinoa HOM05D003752 ORTHO05D004537 2.8e-47 193.4 162 63.6
AUR62001800 Chenopodium quinoa HOM05D003752 ORTHO05D004537 1.8e-46 190.7 206 57.8
Cfa023391 Carpinus fangiana HOM05D003752 ORTHO05D004537 1.9e-40 170.6 128 64.8
AUR62027298 Chenopodium quinoa HOM05D003752 ORTHO05D004537 5.6e-40 169.1 134 67.9
BolC2t10201H Brassica oleracea HOM05D003752 ORTHO05D004537 2.4e-38 163.7 97 86.6
Haze_26222 Corylus avellana HOM05D003752 ORTHO05D004537 1.3e-36 157.9 121 61.2
VMungo1127G2230 Vigna mungo HOM05D003752 ORTHO05D004537 2.7e-34 150.2 84 82.1
Aqoxy427s001 Aquilegia oxysepala HOM05D003752 ORTHO05D004537 5.1e-33 146.0 131 62.6
Cpa.g.c44419 Carica papaya HOM05D003752 ORTHO05D004537 6.6e-33 145.6 145 55.9
MBI11_g22235_MAGBIO Magnolia biondii HOM05D003752 ORTHO05D004537 1.9e-32 144.1 111 69.4


User provided reference genes

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