Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_747.g21869 Utricularia gibba HOM05D001880 ORTHO05D004730 8.3e-186 653.7 357 100.0
MSTRG.25899 Avicennia marina HOM05D001880 ORTHO05D004730 1.2e-83 314.3 426 50.9
Migut.A00234 Erythranthe guttata HOM05D001880 ORTHO05D004730 7.3e-81 305.1 388 49.7
Oeu012185.1 Olea europaea HOM05D001880 ORTHO05D004730 2.6e-78 296.6 379 48.3
SGA_v2.0_scaffold185G40074 Striga asiatica HOM05D001880 ORTHO05D004730 9.8e-78 294.7 390 47.2
SalBow4G1753 Salvia bowleyana HOM05D001880 ORTHO05D004730 5.9e-75 285.4 383 47.3
PGSC0003DMG400010836 Solanum tuberosum HOM05D001880 ORTHO05D004730 5.9e-75 285.4 389 45.5
Peaxi162Scf00523g00112 Petunia axillaris HOM05D001880 ORTHO05D004730 2.8e-72 276.6 405 43.0
Dinv14229 Davidia involucrata HOM05D001880 ORTHO05D004730 8.0e-72 275.0 399 45.4
Sopen08g022160 Solanum pennellii HOM05D001880 ORTHO05D004730 8.0e-72 275.0 389 44.0
Actinidia31224 Actinidia chinensis HOM05D001880 ORTHO05D004730 1.0e-71 274.6 434 42.9
Solyc08g068310.3 Solanum lycopersicum HOM05D001880 ORTHO05D004730 1.0e-71 274.6 397 43.1
CAN.G21.30 Capsicum annuum HOM05D001880 ORTHO05D004730 2.3e-71 273.5 379 45.1
Cc08_g09020 Coffea canephora HOM05D001880 ORTHO05D004730 8.9e-71 271.6 387 44.4
Sed0010239 Sechium edule HOM05D001880 ORTHO05D004730 2.6e-70 270.0 388 46.4
Ciclev10008260m.g Citrus clementina HOM05D001880 ORTHO05D004730 3.4e-70 269.6 380 45.8
Nitab4.5_0007240g0020 Nicotiana tabacum HOM05D001880 ORTHO05D004730 4.4e-70 269.2 383 45.7
Gohir.A05G048100 Gossypium hirsutum HOM05D001880 ORTHO05D004730 4.9e-69 265.8 379 45.1
Gohir.D05G049600 Gossypium hirsutum HOM05D001880 ORTHO05D004730 1.1e-68 264.6 379 44.9
PGR031G0301 Punica granatum HOM05D001880 ORTHO05D004730 1.4e-68 264.2 388 46.4
Haze_21861 Corylus avellana HOM05D001880 ORTHO05D004730 4.1e-68 262.7 439 44.0
Lj7C706T10 Lonicera japonica HOM05D001880 ORTHO05D004730 4.1e-68 262.7 389 43.7
Gorai.009G050900 Gossypium raimondii HOM05D001880 ORTHO05D004730 2.0e-67 260.4 372 44.1
Hma1.2p1_0140F.1_g063490 Hydrangea macrophylla HOM05D001880 ORTHO05D004730 2.0e-67 260.4 408 43.4
Glyma.06G082200 Glycine max HOM05D001880 ORTHO05D004730 6.0e-67 258.8 420 41.0
Cpa.g.sc78.77 Carica papaya HOM05D001880 ORTHO05D004730 7.8e-67 258.5 381 44.6
MELO3C011157.2 Cucumis melo HOM05D001880 ORTHO05D004730 7.8e-67 258.5 394 43.7
TAR383G0573 Trochodendron aralioides HOM05D001880 ORTHO05D004730 7.8e-67 258.5 398 43.5
CSS0018831 Camellia sinensis var. sinensis HOM05D001880 ORTHO05D004730 1.0e-66 258.1 395 43.0
CiPaw.08G023900 Carya illinoinensis HOM05D001880 ORTHO05D004730 1.7e-66 257.3 429 40.1
Cfa013347 Carpinus fangiana HOM05D001880 ORTHO05D005098 2.3e-66 256.9 421 43.2
Potri.006G241800 Populus trichocarpa HOM05D001880 ORTHO05D004730 2.3e-66 256.9 416 43.8
DCAR_007706 Daucus carota HOM05D001880 ORTHO05D004730 3.0e-66 256.5 391 44.5
Nitab4.5_0000052g0190 Nicotiana tabacum HOM05D001880 ORTHO05D004730 3.9e-66 256.1 381 44.1
Lsat_1_v5_gn_5_33160 Lactuca sativa HOM05D001880 ORTHO05D004730 6.6e-66 255.4 380 45.0
Potri.018G037900 Populus trichocarpa HOM05D001880 ORTHO05D004730 6.6e-66 255.4 418 42.8
Nn5g30497 Nelumbo nucifera HOM05D001880 ORTHO05D004730 1.1e-65 254.6 399 43.1
Thecc.09G040300 Theobroma cacao HOM05D001880 ORTHO05D004730 7.3e-65 251.9 376 43.6
Duzib168G0571 Durio zibethinus HOM05D001880 ORTHO05D004730 1.2e-64 251.1 407 42.3
Sc24g0001330 Simmondsia chinensis HOM05D001880 ORTHO05D004730 1.6e-64 250.8 384 42.7
CsaV3_2G031070 Cucumis sativus L. HOM05D001880 ORTHO05D004730 2.8e-64 250.0 399 42.4
GSVIVG01035666001 Vitis vinifera HOM05D001880 ORTHO05D004730 1.8e-63 247.3 410 41.5
Ah.16g105290 Amaranthus hybridus HOM05D001880 ORTHO05D004730 2.3e-63 246.9 384 41.9
TAR626G0413 Trochodendron aralioides HOM05D001880 ORTHO05D004730 3.1e-63 246.5 375 41.9
Glyma.04G080500 Glycine max HOM05D001880 ORTHO05D004730 6.8e-63 245.4 444 38.5
Lj1g0005918 Lotus japonicus HOM05D001880 ORTHO05D004730 6.8e-63 245.4 379 41.7
HanXRQChr07g0190061 Helianthus annuus HOM05D001880 ORTHO05D004730 1.2e-62 244.6 380 43.4
Gohir.D10G119600 Gossypium hirsutum HOM05D001880 ORTHO05D004730 1.5e-62 244.2 390 42.6
DCAR_003047 Daucus carota HOM05D001880 ORTHO05D004730 2.0e-62 243.8 396 42.4
Duzib150G1399 Durio zibethinus HOM05D001880 ORTHO05D004730 3.4e-62 243.0 373 42.6
Sabra06G0189200 Salix brachista HOM05D001880 ORTHO05D004730 5.8e-62 242.3 383 45.4
Aa31LG2G17280 Aethionema arabicum HOM05D001880 ORTHO05D004730 7.5e-62 241.9 378 44.7
Manes.03G063200 Manihot esculenta HOM05D001880 ORTHO05D004730 9.9e-62 241.5 420 41.4
FvH4_2g36050 Fragaria vesca HOM05D001880 ORTHO05D004730 3.7e-61 239.6 380 42.6
AUR62023013 Chenopodium quinoa HOM05D001880 ORTHO05D004730 6.4e-61 238.8 389 40.4
Lj8C602G7 Lonicera japonica HOM05D001880 ORTHO05D004730 8.3e-61 238.4 396 40.7
Phvul.009G106600 Phaseolus vulgaris HOM05D001880 ORTHO05D004730 8.3e-61 238.4 449 37.9
Carub.0007s0776 Capsella rubella HOM05D001880 ORTHO05D004730 1.1e-60 238.0 377 43.2
Lalb_Chr23g0269481 Lupinus albus HOM05D001880 ORTHO05D004730 1.1e-60 238.0 379 41.4
RcHm_v2.0_Chr6g0305801 Rosa chinensis HOM05D001880 ORTHO05D004730 1.4e-60 237.7 379 42.0
AL7G19020 Arabidopsis lyrata HOM05D001880 ORTHO05D004730 1.9e-60 237.3 379 42.2
ClCG08G012380 Citrullus lanatus HOM05D001880 ORTHO05D004730 1.9e-60 237.3 385 42.6
Gohir.D01G144201 Gossypium hirsutum HOM05D001880 ORTHO05D004730 1.9e-60 237.3 396 41.4
Gorai.011G131400 Gossypium raimondii HOM05D001880 ORTHO05D004730 1.9e-60 237.3 397 41.1
AT4G32720 Arabidopsis thaliana HOM05D001880 ORTHO05D004730 7.1e-60 235.3 379 43.3
FAN27G3372 Fragaria x ananassa HOM05D001880 ORTHO05D004730 7.1e-60 235.3 380 42.1
FAN15G1328 Fragaria x ananassa HOM05D001880 ORTHO05D004730 9.2e-60 235.0 384 42.4
vmacro11077 Vaccinium macrocarpon HOM05D001880 ORTHO05D004730 1.2e-59 234.6 463 38.2
CANSAT25G1999 Cannabis sativa HOM05D001880 ORTHO05D004730 1.6e-59 234.2 380 41.3
MD08G1117800 Malus domestica HOM05D001880 ORTHO05D004730 2.1e-59 233.8 385 41.8
Ca_12729_v3 Cicer arietinum L. HOM05D001880 ORTHO05D004730 4.6e-59 232.6 408 40.2
AUR62009326 Chenopodium quinoa HOM05D001880 ORTHO05D004730 1.0e-58 231.5 385 39.7
Hund03438 Selenicereus undatus HOM05D001880 ORTHO05D004730 1.0e-58 231.5 361 43.8
BraA01t00530Z Brassica rapa HOM05D001880 ORTHO05D004730 2.3e-58 230.3 377 41.4
ECA246G2183 Erigeron canadensis HOM05D001880 ORTHO05D004730 2.3e-58 230.3 381 43.0
BcaB03g12759 Brassica carinata HOM05D001880 ORTHO05D004730 6.6e-58 228.8 385 40.5
QL12p026586 Quercus lobata HOM05D001880 ORTHO05D004730 8.6e-58 228.4 418 39.2
VMungo0647G0420 Vigna mungo HOM05D001880 ORTHO05D004730 1.1e-57 228.0 378 40.2
A01p05590 Brassica napus HOM05D001880 ORTHO05D004730 1.9e-57 227.3 377 41.4
Eucgr.C01584 Eucalyptus grandis HOM05D001880 ORTHO05D004730 5.6e-57 225.7 384 40.6
Prupe.1G452100 Prunus persica HOM05D001880 ORTHO05D004730 5.6e-57 225.7 401 40.4
THA.LOC104803768 Tarenaya hassleriana HOM05D001880 ORTHO05D004730 7.3e-57 225.3 379 40.1
C01p06170 Brassica napus HOM05D001880 ORTHO05D004730 1.2e-56 224.6 376 40.2
BolC1t00615H Brassica oleracea HOM05D001880 ORTHO05D004730 1.2e-56 224.6 376 40.2
Thhalv10025209m.g Eutrema salsugineum HOM05D001880 ORTHO05D004730 1.2e-56 224.6 376 41.0
A08p17950 Brassica napus HOM05D001880 ORTHO05D004730 2.1e-56 223.8 386 40.4
BraA08t33746Z Brassica rapa HOM05D001880 ORTHO05D004730 2.1e-56 223.8 386 40.4
Rhsim02G0181700 Rhododendron simsii HOM05D001880 ORTHO05D004730 2.1e-56 223.8 368 40.8
TWI32G0570 Tripterygium wilfordii HOM05D001880 ORTHO05D004730 2.1e-56 223.8 433 37.4
CARHR240720 Cardamine hirsuta HOM05D001880 ORTHO05D004730 3.6e-56 223.0 378 40.2
Glyma.17G190500 Glycine max HOM05D001880 ORTHO05D004730 1.1e-55 221.5 382 40.3
VMungo1309G0461 Vigna mungo HOM05D001880 ORTHO05D005098 1.8e-55 220.7 457 36.8
BcaNung06641 Brassica carinata HOM05D001880 ORTHO05D004730 2.3e-55 220.3 376 39.9
Gorai.002G178100 Gossypium raimondii HOM05D001880 ORTHO05D004730 2.3e-55 220.3 380 42.1
Phvul.001G061100 Phaseolus vulgaris HOM05D001880 ORTHO05D004730 2.3e-55 220.3 378 39.9
C03p87060 Brassica napus HOM05D001880 ORTHO05D000054 3.1e-55 219.9 376 39.9
arahy.Tifrunner.gnm1.ann1.KUD1W7 Arachis hypogaea HOM05D001880 ORTHO05D004730 1.5e-54 217.6 390 40.8
Sp7g30490 Schrenkiella parvula HOM05D001880 ORTHO05D004730 2.6e-54 216.9 376 40.2
BolC3t21003H Brassica oleracea HOM05D001880 ORTHO05D004730 3.4e-54 216.5 378 39.9
Sed0005261 Sechium edule HOM05D001880 ORTHO05D004730 4.4e-54 216.1 358 40.8
Lj8C597T6 Lonicera japonica HOM05D001880 ORTHO05D004730 5.8e-54 215.7 391 39.1
PSO210G1470 Papaver somniferum HOM05D001880 ORTHO05D004730 5.8e-54 215.7 385 40.0
Dinv30257 Davidia involucrata HOM05D001880 ORTHO05D004730 1.3e-53 214.5 365 40.8
Aqoxy7G01616 Aquilegia oxysepala HOM05D001880 ORTHO05D004730 2.9e-53 213.4 386 39.9
Medtr1g026890 Medicago truncatula HOM05D001880 ORTHO05D004730 6.4e-53 212.2 412 38.6
TWI63G1191 Tripterygium wilfordii HOM05D001880 ORTHO05D004730 6.4e-53 212.2 402 37.3
CDE05G2503 Ceratophyllum demersum HOM05D001880 ORTHO05D004730 8.4e-53 211.8 375 38.9
Psat6g035680 Pisum sativum HOM05D001880 ORTHO05D004730 8.4e-53 211.8 404 39.1
Gorai.001G028400 Gossypium raimondii HOM05D001880 ORTHO05D004730 1.1e-52 211.5 385 39.2
TPR.G20025 Trifolium pratense HOM05D001880 ORTHO05D004730 1.4e-52 211.1 379 37.5
Gohir.A07G023700 Gossypium hirsutum HOM05D001880 ORTHO05D004730 7.1e-52 208.8 385 38.4
HPP92_013605 Vanilla planifolia HOM05D001880 ORTHO05D004730 7.1e-52 208.8 416 37.3
arahy.Tifrunner.gnm1.ann1.I11X1M Arachis hypogaea HOM05D001880 ORTHO05D004730 9.2e-52 208.4 416 38.9
PSO210G2288 Papaver somniferum HOM05D001880 ORTHO05D004730 2.3e-50 203.8 385 38.2
PSO782G2488 Papaver somniferum HOM05D001880 ORTHO05D004730 2.3e-50 203.8 382 40.3
Manes.16G069051 Manihot esculenta HOM05D001880 ORTHO05D004730 3.0e-50 203.4 422 37.4
EL10Ac2g04069 Beta vulgaris HOM05D001880 ORTHO05D004730 6.6e-50 202.2 394 37.3
Os02g0610400 Oryza sativa ssp. japonica HOM05D001880 ORTHO05D004730 8.6e-50 201.8 384 39.6
SEGI_31507 Sequoiadendron giganteum HOM05D001880 ORTHO05D004730 3.3e-49 199.9 387 35.9
PSO832G4225 Papaver somniferum HOM05D001880 ORTHO05D004730 7.3e-49 198.7 382 39.5
Zm00001eb246770 Zea mays HOM05D001880 ORTHO05D004730 2.0e-46 190.7 390 36.7
SHI18622 Sapria himalayana HOM05D001880 ORTHO05D004730 2.6e-46 190.3 414 36.7
BcaC09g52067 Brassica carinata HOM05D001880 ORTHO05D004730 5.8e-46 189.1 341 39.6
Gohir.D07G027300 Gossypium hirsutum HOM05D001880 ORTHO05D004730 4.2e-44 183.0 352 38.4
MBI01_g07170_MAGBIO Magnolia biondii HOM05D001880 ORTHO05D004730 3.5e-43 179.9 361 36.3
Zm00001eb425750 Zea mays HOM05D001880 ORTHO05D004730 1.0e-42 178.3 352 36.9
ATR0315G050 Amborella trichopoda HOM05D001880 ORTHO05D004730 3.0e-42 176.8 407 33.9
CDE05G1114 Ceratophyllum demersum HOM05D001880 ORTHO05D004730 8.4e-37 158.7 333 35.4
Atru.chr7.2154 Acer truncatum HOM05D001880 ORTHO05D004730 5.4e-36 156.0 108 70.4
MBI04_g19165_MAGBIO Magnolia biondii HOM05D001880 ORTHO05D004730 1.0e-34 151.8 467 29.3
Manes.04G129200 Manihot esculenta HOM05D001880 ORTHO05D004730 1.3e-32 144.8 385 31.9
AagrBONN_evm.TU.Sc2ySwM_228.5048 Anthoceros agrestis HOM05D001880 ORTHO05D004730 2.8e-32 143.7 377 33.7
Glyma.14G143700 Glycine max HOM05D001880 ORTHO05D004730 3.4e-30 136.7 234 38.0
SMO343G0026 Selaginella moellendorffii HOM05D001880 ORTHO05D004730 2.1e-27 127.5 352 32.1
CANSAT56G0393 Cannabis sativa HOM05D001880 ORTHO05D004730 3.5e-27 126.7 343 31.5
AT1G79880 Arabidopsis thaliana HOM05D001880 ORTHO05D004730 3.0e-26 123.6 349 31.5
Thhalv10018639m.g Eutrema salsugineum HOM05D001880 ORTHO05D004730 5.1e-26 122.9 357 30.3
Mapoly0005s0125 Marchantia polymorpha HOM05D001880 ORTHO05D004730 1.1e-25 121.7 330 29.7
Pp3c21_14880 Physcomitrium patens HOM05D001880 ORTHO05D004730 4.3e-25 119.8 340 28.2
AL2G41680 Arabidopsis lyrata HOM05D001880 ORTHO05D004730 7.4e-25 119.0 378 28.0
COL.COLO4_18692 Corchorus olitorius HOM05D001880 ORTHO05D004730 7.4e-25 119.0 335 30.4
BcaNung07152 Brassica carinata HOM05D001880 ORTHO05D004730 1.6e-24 117.9 339 32.7
C06p28780 Brassica napus HOM05D001880 ORTHO05D004730 1.6e-24 117.9 339 32.7
A07p26390 Brassica napus HOM05D001880 ORTHO05D004730 3.7e-24 116.7 335 31.3
BraA07t30283Z Brassica rapa HOM05D001880 ORTHO05D004730 3.7e-24 116.7 335 31.3
BolC6t38048H Brassica oleracea HOM05D001880 ORTHO05D004730 5.3e-23 112.8 354 30.2
Sp5g35890 Schrenkiella parvula HOM05D001880 ORTHO05D004730 3.4e-22 110.2 341 28.7
GSVIVG01035689001 Vitis vinifera HOM05D001880 ORTHO05D004730 7.6e-22 109.0 86 58.1
Atru.chr7.2155 Acer truncatum HOM05D001880 ORTHO05D004730 1.0e-21 108.6 81 66.7
SMO367G0348 Selaginella moellendorffii HOM05D001880 ORTHO05D004730 1.0e-21 108.6 321 30.5
MD15G1097100 Malus domestica HOM05D001880 ORTHO05D004730 2.9e-21 107.1 79 69.6
Duzib235G1154 Durio zibethinus HOM05D001880 ORTHO05D004730 6.5e-21 105.9 249 34.1
BcaC08g45275 Brassica carinata HOM05D001880 ORTHO05D004730 1.4e-20 104.8 345 29.9
BraA01t03248Z Brassica rapa HOM05D001880 ORTHO05D004730 1.9e-20 104.4 81 61.7
BraA10t44716Z Brassica rapa HOM05D001880 ORTHO05D004730 1.9e-20 104.4 81 61.7
CARHR074610 Cardamine hirsuta HOM05D001880 ORTHO05D004730 2.5e-20 104.0 329 28.9
A10p26590 Brassica napus HOM05D001880 ORTHO05D004730 5.5e-20 102.8 81 60.5
Actinidia13311 Actinidia chinensis HOM05D001880 ORTHO05D004730 7.1e-20 102.4 202 34.7
MD15G1097300 Malus domestica HOM05D001880 ORTHO05D004730 7.1e-20 102.4 81 59.3
Zm00001eb202540 Zea mays HOM05D002249 ORTHO05D002443 1.6e-19 101.3 82 64.6
COL.COLO4_30423 Corchorus olitorius HOM05D001880 ORTHO05D004730 8.2e-16 89.0 307 29.6
CAN.G118.14 Capsicum annuum HOM05D001880 ORTHO05D004730 1.8e-15 87.8 156 36.5
Aa31LG4G170 Aethionema arabicum HOM05D001880 ORTHO05D004730 6.9e-15 85.9 321 26.8
vmacro05846 Vaccinium macrocarpon HOM05D001880 ORTHO05D004730 1.2e-14 85.1 245 33.1
unitig_0.g2805 Utricularia gibba HOM05D000401 ORTHO05D000252 2.5e-09 67.4 41 82.9
CBR_g34646 Chara braunii HOM05D001880 ORTHO05D004730 4.3e-09 66.6 86 38.4
CBR_g39611 Chara braunii HOM05D001880 ORTHO05D004730 4.8e-08 63.2 137 33.6
Zm00001eb332250 Zea mays HOM05D002343 ORTHO05D002443 3.1e-07 60.5 43 69.8
CBR_g39614 Chara braunii HOM05D001880 ORTHO05D004730 3.4e-06 57.0 68 47.1
Oeu055408.1 Olea europaea HOM05D001880 ORTHO05D004730 4.5e-06 56.6 39 64.1


User provided reference genes

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