Gene: Sabra06G0189200

General Information

Structural Information

Species Salix brachista
Gene Identifier Sabra06G0189200
Transcript Identifier Sabra06G0189200.1
Gene Type Coding gene
Location GWHAAZH00000006 : 19026550-19030281 : negative

Gene Family Information

Homologous GF
Orthologous GF

ID HOM05D001880
#Genes/#Species 350/100
Phylogenetic origin

ID ORTHO05D004730
#Genes/#Species 172/100
Phylogenetic origin

Gene Duplication Information

Tandem Duplication Tandem duplicate
Block Duplication Block duplicate

Labels

Identifiers

tid Sabra06G0189200.1
Accession GWHGAAZH011162
Accession GWHTAAZH011162

Descriptions

Ortholog descriptions

Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0034470	ISO	PLAZA Integrative Orthology	ncRNA processing	AT4G32720
GO:0006364	ISO	PLAZA Integrative Orthology	rRNA processing	AT4G32720

Molecular Function

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0003676	IEA	InterPro	nucleic acid binding
GO:0003723	IEA	InterPro	RNA binding
GO:0003729	ISO	PLAZA Integrative Orthology	mRNA binding	AT4G32720

Cellular Component

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0005634	ISO	PLAZA Integrative Orthology	nucleus	AT4G32720
GO:0005618	ISO	PLAZA Integrative Orthology	cell wall	AT4G32720
GO:0005829	ISO	PLAZA Integrative Orthology	cytosol	AT4G32720
GO:0005730	ISO	PLAZA Integrative Orthology	nucleolus	AT4G32720
GO:0005654	ISO	PLAZA Integrative Orthology	nucleoplasm	AT4G32720

Color Legend

Experimental Evidence

Computational Reviewed Evidence

Electronic Evidence

InterPro	Description
IPR006630	La-type HTH domain
IPR000504	RNA recognition motif domain
IPR035979	RNA-binding domain superfamily
IPR036388	Winged helix-like DNA-binding domain superfamily
IPR014886	La protein, xRRM domain
IPR012677	Nucleotide-binding alpha-beta plait domain superfamily

Mapman id	Description
16.7.3	RNA processing.RNA chaperone activities.RNA chaperone (LA/IRP2)