Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_747.g21671 Utricularia gibba HOM05D004511 ORTHO05D005348 8.0e-252 873.2 426 100.0
MSTRG.9851 Avicennia marina HOM05D004511 ORTHO05D005348 1.8e-187 659.4 422 74.6
Migut.G00563 Erythranthe guttata HOM05D004511 ORTHO05D005348 6.4e-185 651.0 422 73.9
SGA_v2.0_scaffold67G22677 Striga asiatica HOM05D004511 ORTHO05D005348 6.0e-183 644.4 410 74.6
Nitab4.5_0005154g0040 Nicotiana tabacum HOM05D004511 ORTHO05D005348 1.5e-178 629.8 416 73.1
Dinv29796 Davidia involucrata HOM05D004511 ORTHO05D005348 2.0e-178 629.4 424 71.0
Nitab4.5_0001041g0180 Nicotiana tabacum HOM05D004511 ORTHO05D005348 6.4e-177 624.4 416 72.4
Cc03_g06420 Coffea canephora HOM05D004511 ORTHO05D005348 3.2e-176 622.1 414 70.8
Solyc09g090870.3 Solanum lycopersicum HOM05D004511 ORTHO05D005348 1.3e-174 616.7 416 71.2
QL06p021350 Quercus lobata HOM05D004511 ORTHO05D005348 1.8e-174 616.3 422 71.3
Sopen09g033830 Solanum pennellii HOM05D004511 ORTHO05D005348 3.0e-174 615.5 416 71.2
Sc11g0002730 Simmondsia chinensis HOM05D004511 ORTHO05D005348 1.3e-172 610.1 422 69.9
CiPaw.01G177000 Carya illinoinensis HOM05D004511 ORTHO05D005348 4.8e-172 608.2 422 69.9
Sp3g22130 Schrenkiella parvula HOM05D004511 ORTHO05D005348 1.4e-171 606.7 407 70.3
Ciclev10004190m.g Citrus clementina HOM05D004511 ORTHO05D005348 5.3e-171 604.7 389 74.3
A07p07990 Brassica napus HOM05D004511 ORTHO05D005348 3.4e-170 602.1 403 70.2
BraA07t28586Z Brassica rapa HOM05D004511 ORTHO05D005348 3.4e-170 602.1 403 70.2
Carub.0003s2466 Capsella rubella HOM05D004511 ORTHO05D005348 3.4e-170 602.1 422 68.5
Aqoxy5G00136 Aquilegia oxysepala HOM05D004511 ORTHO05D005348 7.6e-170 600.9 403 70.7
Duzib151G0197 Durio zibethinus HOM05D004511 ORTHO05D005348 7.6e-170 600.9 410 70.2
THA.LOC104821629 Tarenaya hassleriana HOM05D004511 ORTHO05D005348 7.6e-170 600.9 403 71.0
AT3G24320 Arabidopsis thaliana HOM05D004511 ORTHO05D005348 1.3e-169 600.1 402 70.4
AUR62011461 Chenopodium quinoa HOM05D004511 ORTHO05D005348 1.7e-169 599.7 400 71.0
Thhalv10002376m.g Eutrema salsugineum HOM05D004511 ORTHO05D005348 1.7e-169 599.7 403 70.2
Potri.010G065000 Populus trichocarpa HOM05D004511 ORTHO05D005348 1.7e-169 599.7 414 69.1
BcaC06g35683 Brassica carinata HOM05D004511 ORTHO05D005348 2.2e-169 599.4 403 70.2
C07p12050 Brassica napus HOM05D004511 ORTHO05D005348 2.2e-169 599.4 403 70.2
BolC7t41673H Brassica oleracea HOM05D004511 ORTHO05D005348 2.2e-169 599.4 403 70.2
Aa31LG8G11050 Aethionema arabicum HOM05D004511 ORTHO05D005348 2.9e-169 599.0 417 68.8
CANSAT78G2334 Cannabis sativa HOM05D004511 ORTHO05D005348 3.8e-169 598.6 403 70.0
BcaB06g26614 Brassica carinata HOM05D004511 ORTHO05D005348 6.5e-169 597.8 414 69.1
RcHm_v2.0_Chr4g0395811 Rosa chinensis HOM05D004511 ORTHO05D005348 6.5e-169 597.8 403 70.5
Thecc.04G266800 Theobroma cacao HOM05D004511 ORTHO05D005348 8.4e-169 597.4 403 71.2
TWI73G0808 Tripterygium wilfordii HOM05D004511 ORTHO05D005348 8.4e-169 597.4 403 71.2
TAR365G1143 Trochodendron aralioides HOM05D004511 ORTHO05D005348 1.9e-168 596.3 416 69.7
CARHR100420 Cardamine hirsuta HOM05D004511 ORTHO05D005348 2.5e-168 595.9 422 67.5
Ah.01g020260 Amaranthus hybridus HOM05D004511 ORTHO05D005348 2.1e-167 592.8 403 69.2
HanXRQChr06g0182821 Helianthus annuus HOM05D004511 ORTHO05D005348 2.1e-167 592.8 410 70.2
GSVIVG01027931001 Vitis vinifera HOM05D004511 ORTHO05D005348 2.7e-167 592.4 412 69.4
MD13G1223200 Malus domestica HOM05D004511 ORTHO05D005348 3.5e-167 592.0 403 70.2
Gohir.A09G230900 Gossypium hirsutum HOM05D004511 ORTHO05D005348 4.6e-167 591.7 400 71.5
Nn1g02989 Nelumbo nucifera HOM05D004511 ORTHO05D005348 4.6e-167 591.7 417 67.6
Prupe.1G050200 Prunus persica HOM05D004511 ORTHO05D005348 6.0e-167 591.3 403 70.5
Gorai.006G254800 Gossypium raimondii HOM05D004511 ORTHO05D005348 1.3e-166 590.1 400 71.2
PGR004G0717 Punica granatum HOM05D004511 ORTHO05D005348 1.8e-166 589.7 404 69.1
Sed0014740 Sechium edule HOM05D004511 ORTHO05D005348 2.3e-166 589.3 405 69.1
Lalb_Chr02g0150721 Lupinus albus HOM05D004511 ORTHO05D005348 3.0e-166 589.0 407 69.0
CsaV3_3G011610 Cucumis sativus L. HOM05D004511 ORTHO05D005348 5.1e-166 588.2 405 69.6
EL10Ac9g21855 Beta vulgaris HOM05D004511 ORTHO05D005348 6.7e-166 587.8 420 66.4
FvH4_4g05000 Fragaria vesca HOM05D004511 ORTHO05D005348 6.7e-166 587.8 403 69.2
Gohir.D09G232000 Gossypium hirsutum HOM05D004511 ORTHO05D005348 1.1e-165 587.0 400 71.0
ECA248G2418 Erigeron canadensis HOM05D004511 ORTHO05D005348 1.9e-165 586.3 422 65.6
FAN12G0867 Fragaria x ananassa HOM05D004511 ORTHO05D005348 5.7e-165 584.7 403 69.0
ClCG05G003940 Citrullus lanatus HOM05D004511 ORTHO05D005348 1.6e-164 583.2 405 68.9
arahy.Tifrunner.gnm1.ann1.QET6JI Arachis hypogaea HOM05D004511 ORTHO05D005348 1.2e-162 577.0 422 66.8
Actinidia27093 Actinidia chinensis HOM05D004511 ORTHO05D005348 1.7e-161 573.2 424 66.5
arahy.Tifrunner.gnm1.ann1.Z900IQ Arachis hypogaea HOM05D004511 ORTHO05D005348 2.2e-161 572.8 403 68.0
Zm00001eb426210 Zea mays HOM05D004511 ORTHO05D005348 5.0e-161 571.6 402 66.9
DCAR_027355 Daucus carota HOM05D004511 ORTHO05D005348 1.1e-160 570.5 376 71.8
HanXRQChr01g0023051 Helianthus annuus HOM05D004511 ORTHO05D005348 1.1e-160 570.5 419 64.7
Lj6g0021678 Lotus japonicus HOM05D004511 ORTHO05D005348 1.9e-160 569.7 403 67.0
Peaxi162Scf00531g00610 Petunia axillaris HOM05D004511 ORTHO05D005348 1.9e-160 569.7 416 67.1
HPP92_015182 Vanilla planifolia HOM05D004511 ORTHO05D005348 2.5e-160 569.3 400 67.0
Os04g0507000 Oryza sativa ssp. japonica HOM05D004511 ORTHO05D005348 5.5e-160 568.2 385 68.1
Glyma.10G130700 Glycine max HOM05D004511 ORTHO05D005348 1.6e-159 566.6 403 67.2
AUR62016594 Chenopodium quinoa HOM05D004511 ORTHO05D005348 3.0e-158 562.4 400 67.2
COL.COLO4_15984 Corchorus olitorius HOM05D004511 ORTHO05D005348 3.0e-158 562.4 449 63.9
MELO3C006369.2 Cucumis melo HOM05D004511 ORTHO05D005348 3.9e-158 562.0 377 71.1
PSO210G5810 Papaver somniferum HOM05D004511 ORTHO05D005348 6.7e-158 561.2 399 66.7
Medtr1g045670 Medicago truncatula HOM05D004511 ORTHO05D005348 1.5e-157 560.1 403 65.3
ATR0787G210 Amborella trichopoda HOM05D004511 ORTHO05D005348 1.7e-156 556.6 409 63.8
PSO170G1037 Papaver somniferum HOM05D004511 ORTHO05D005348 1.7e-156 556.6 399 66.2
Glyma.20G073500 Glycine max HOM05D004511 ORTHO05D005348 2.4e-155 552.7 394 67.0
Oeu061869.1 Olea europaea HOM05D004511 ORTHO05D005348 1.5e-154 550.1 339 76.7
Psat6g108520 Pisum sativum HOM05D004511 ORTHO05D005348 5.0e-153 545.0 389 66.3
Phvul.007G232900 Phaseolus vulgaris HOM05D004511 ORTHO05D005348 9.4e-152 540.8 389 66.1
AL3G39770 Arabidopsis lyrata HOM05D004511 ORTHO05D005348 3.6e-151 538.9 432 62.3
Atru.chr4.1900 Acer truncatum HOM05D004511 ORTHO05D005348 1.4e-147 526.9 335 75.5
SEGI_11740 Sequoiadendron giganteum HOM05D004511 ORTHO05D005348 2.4e-147 526.2 385 62.6
Eucgr.H02905 Eucalyptus grandis HOM05D004511 ORTHO05D005348 5.3e-147 525.0 347 72.6
Lsat_1_v5_gn_2_41221 Lactuca sativa HOM05D004511 ORTHO05D005348 1.2e-143 513.8 351 70.9
Rhsim04G0171100 Rhododendron simsii HOM05D004511 ORTHO05D005348 5.5e-136 488.4 534 50.2
Mapoly0067s0046 Marchantia polymorpha HOM05D004511 ORTHO05D005348 4.1e-131 472.2 391 55.5
Ca_11884_v3 Cicer arietinum L. HOM05D004511 ORTHO05D005348 5.9e-122 441.8 374 58.6
Lj6A637T63 Lonicera japonica HOM05D004511 ORTHO05D005348 4.2e-120 435.6 269 75.1
SMO364G0324 Selaginella moellendorffii HOM05D004511 ORTHO05D005348 5.5e-120 435.3 365 57.8
Pp3c8_22090 Physcomitrium patens HOM05D004511 ORTHO05D005348 3.6e-119 432.6 405 52.1
AL2G22890 Arabidopsis lyrata HOM05D004511 ORTHO05D005348 2.8e-111 406.4 295 68.8
Pp3c23_17640 Physcomitrium patens HOM05D004511 ORTHO05D005348 6.1e-111 405.2 404 48.5
vmacro08562 Vaccinium macrocarpon HOM05D004511 ORTHO05D005348 8.0e-111 404.8 241 78.0
FAN17G0167 Fragaria x ananassa HOM05D004511 ORTHO05D005348 1.8e-110 403.7 403 52.9
Ca_07387_v3 Cicer arietinum L. HOM05D004511 ORTHO05D005348 3.4e-109 399.4 371 55.5
CSS0015875 Camellia sinensis var. sinensis HOM05D004511 ORTHO05D005348 2.5e-104 383.3 227 77.1
TPR.G23996 Trifolium pratense HOM05D004511 ORTHO05D005348 1.8e-102 377.1 366 51.9
CAN.G524.10 Capsicum annuum HOM05D004511 ORTHO05D005348 5.8e-101 372.1 219 77.2
Hund00489 Selenicereus undatus HOM05D004511 ORTHO05D005348 4.1e-99 365.9 237 68.8
CSS0022858 Camellia sinensis var. sinensis HOM05D004511 ORTHO05D005348 2.5e-96 356.7 208 78.8
CDE08G1197 Ceratophyllum demersum HOM05D004511 ORTHO05D005348 3.9e-89 332.8 225 70.7
Ca_26419_v3 Cicer arietinum L. HOM05D004511 ORTHO05D005348 9.5e-88 328.2 378 47.6
Manes.03G157900 Manihot esculenta HOM05D004511 ORTHO05D005348 4.0e-86 322.8 195 77.4
Hund00476 Selenicereus undatus HOM05D004511 ORTHO05D005348 2.9e-84 316.6 195 71.8
SHI00812 Sapria himalayana HOM05D004511 ORTHO05D005348 1.3e-81 307.8 243 60.1
FAN22G0933 Fragaria x ananassa HOM05D004511 ORTHO05D005348 4.8e-71 272.7 236 57.6
VMungo0720G1651 Vigna mungo HOM05D004511 ORTHO05D005348 4.6e-58 229.6 224 53.6
CBR_g22304 Chara braunii HOM05D000019 ORTHO05D000002 8.4e-52 208.8 205 51.7
PRCOL_00002937 Prasinoderma coloniale HOM05D004511 ORTHO05D005348 8.4e-52 208.8 372 38.4
Hund00475 Selenicereus undatus HOM05D004511 ORTHO05D005348 1.6e-50 204.5 181 56.4
MCO07G727 Micromonas commoda HOM05D004511 ORTHO05D005348 8.5e-44 182.2 413 34.4
VMungo0720G0419 Vigna mungo HOM05D004511 ORTHO05D005348 1.6e-42 177.9 181 48.1
Haze_11474 Corylus avellana HOM05D004511 ORTHO05D005348 3.9e-41 173.3 142 57.7
SHI00817 Sapria himalayana HOM05D004511 ORTHO05D005348 3.7e-39 166.8 142 61.3
SEGI_26830 Sequoiadendron giganteum HOM05D004511 ORTHO05D005348 4.1e-38 163.3 126 59.5
Sopen09g033860 Solanum pennellii HOM05D004511 ORTHO05D005348 1.2e-37 161.8 120 70.0
Glyma.10G121578 Glycine max HOM05D004511 ORTHO05D005348 4.2e-35 153.3 137 57.7
Glyma.10G121584 Glycine max HOM05D004511 ORTHO05D005348 3.6e-34 150.2 135 57.0
Glyma.10G121600 Glycine max HOM05D004511 ORTHO05D005348 1.4e-33 148.3 135 57.0
Glyma.10G121560 Glycine max HOM05D004511 ORTHO05D005348 9.7e-32 142.1 152 51.3
vmacro08561 Vaccinium macrocarpon HOM05D004511 ORTHO05D005348 2.0e-29 134.4 104 66.3
Solyc09g090890.3 Solanum lycopersicum HOM05D004511 ORTHO05D005348 5.0e-28 129.8 98 65.3
CSS0045058 Camellia sinensis var. sinensis HOM05D004511 ORTHO05D005348 3.1e-22 110.5 83 67.5
Atru.chr4.2015 Acer truncatum HOM05D004511 ORTHO05D005348 9.1e-22 109.0 215 34.0
CSS0023992 Camellia sinensis var. sinensis HOM05D004511 ORTHO05D005348 9.1e-22 109.0 83 66.3
Ca_30594_v3 Cicer arietinum L. HOM05D004511 ORTHO05D005348 1.3e-20 105.1 94 58.5
Lj6A637T62 Lonicera japonica HOM05D004511 ORTHO05D005348 2.7e-18 97.4 74 66.2
CSS0010114 Camellia sinensis var. sinensis HOM05D004511 ORTHO05D005348 1.1e-14 85.5 80 53.8
CSS0021105 Camellia sinensis var. sinensis HOM05D004511 ORTHO05D005348 1.4e-14 85.1 79 54.4
TPR.G7054 Trifolium pratense HOM05D004511 ORTHO05D005348 2.4e-14 84.3 78 55.1
Cpa.g.c32688 Carica papaya HOM05D004511 ORTHO05D005348 1.6e-13 81.6 40 87.5
Cre06.g250850 Chlamydomonas reinhardtii HOM05D004511 ORTHO05D005348 1.6e-13 81.6 195 34.9
CDE08G1007 Ceratophyllum demersum HOM05D004511 ORTHO05D005348 4.5e-13 80.1 40 85.0
Ca_21499_v3 Cicer arietinum L. HOM05D004511 ORTHO05D005348 2.2e-12 77.8 94 44.7
Lsat_1_v5_gn_1_68561 Lactuca sativa HOM05D004511 ORTHO05D005348 5.0e-12 76.6 73 58.9
ATR0787G159 Amborella trichopoda HOM05D004511 ORTHO05D005348 4.9e-07 60.1 39 64.1


User provided reference genes

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