Gene: Solyc09g090890.3
General Information
Structural Information
- Species Solanum lycopersicum
- Gene Identifier Solyc09g090890.3
- Transcript Identifier Solyc09g090890.3.1
- Gene Type Coding gene
- Location SL4.0ch09 : 66398419-66400455 : negative
Gene Family Information
- ID HOM05D004511
- #Genes/#Species 160/92
- Phylogenetic origin
- ID ORTHO05D005348
- #Genes/#Species 159/92
- Phylogenetic origin
Gene Duplication Information
- Tandem Duplication Tandem duplicate
Labels
Identifiers
- tid Solyc09g090890.3.1
- uniprot A0A3Q7I7Y0
- gene_id Solyc09g090890
Descriptions
- Description DNA mismatch repair protein MSH1, mitochondrial (AHRD V3.3 *-* A0A2G2ZUJ8_CAPAN)
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0006298 | IEA | GOA Database | mismatch repair | |
| GO:0006298 | IEA | InterPro | mismatch repair |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005524 | IEA | GOA Database | ATP binding | |
| GO:0005524 | IEA | InterPro | ATP binding | |
| GO:0030983 | IEA | GOA Database | mismatched DNA binding | |
| GO:0030983 | IEA | InterPro | mismatched DNA binding |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR045076 | DNA mismatch repair MutS family |
| Mapman id | Description |
|---|---|
| 35.1 | not assigned.annotated |