Gene: QL06p021350
General Information
Structural Information
- Species Quercus lobata
- Gene Identifier QL06p021350
- Transcript Identifier QL06p021350
- Gene Type Coding gene
- Location 6 : 21335387-21364230 : positive
Gene Family Information
- ID HOM05D004511
- #Genes/#Species 160/92
- Phylogenetic origin
- ID ORTHO05D005348
- #Genes/#Species 159/92
- Phylogenetic origin
Gene Duplication Information
Labels
Identifiers
- pid QL06p021350:mrna
- uniprot A0A7N2LYM8
Descriptions
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0006298 | IEA | GOA Database | mismatch repair | |
| GO:0006298 | IEA | InterPro | mismatch repair | |
| GO:0006974 | IEA | GOA Database | cellular response to DNA damage stimulus | |
| GO:0009408 | ISO | PLAZA Integrative Orthology | response to heat | AT3G24320 |
| GO:0032042 | ISO | PLAZA Integrative Orthology | mitochondrial DNA metabolic process | AT3G24320 |
| GO:0000002 | ISO | PLAZA Integrative Orthology | mitochondrial genome maintenance | AT3G24320 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005524 | IEA | GOA Database | ATP binding | |
| GO:0005524 | IEA | InterPro | ATP binding | |
| GO:0030983 | IEA | GOA Database | mismatched DNA binding | |
| GO:0030983 | IEA | InterPro | mismatched DNA binding | |
| GO:0003677 | IEA | GOA Database | DNA binding | |
| GO:0000166 | IEA | GOA Database | nucleotide binding |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0009507 | ISO | PLAZA Integrative Orthology | chloroplast | AT3G24320 |
| GO:0005739 | ISO | PLAZA Integrative Orthology | mitochondrion | AT3G24320 |
| GO:0042651 | ISO | PLAZA Integrative Orthology | thylakoid membrane | AT3G24320 |
| GO:0009536 | ISO | PLAZA Integrative Orthology | plastid | AT3G24320 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR016151 | DNA mismatch repair protein MutS, N-terminal |
| IPR045076 | DNA mismatch repair MutS family |
| IPR007695 | DNA mismatch repair protein MutS-like, N-terminal |
| IPR000432 | DNA mismatch repair protein MutS, C-terminal |
| IPR027417 | P-loop containing nucleoside triphosphate hydrolase |
| IPR035901 | GIY-YIG endonuclease superfamily |
| Mapman id | Description |
|---|---|
| 13.5.8.5 | Cell cycle organisation.organellar DNA replication.genome stability maintenance.regulatory factor (MSH1) |