Gene: Pp3c23_17640

General Information

Structural Information

  • Species Physcomitrium patens
  • Gene Identifier Pp3c23_17640
  • Transcript Identifier Pp3c23_17640V3.6
  • Gene Type Coding gene
  • Location Chr23 : 11648349-11652798 : negative

Gene Family Information

  • ID HOM05D004511
  • #Genes/#Species 160/92
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • name Pp3c23_17640V3.6
  • pacid 32949764
  • alias Phypa_144992
  • alias Pp1s222_41V6
  • alias Phpat.023G062600
  • uniprot A0A1L7NZY3

Descriptions

  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006298
IBA
IEA
GOA Databasemismatch repair
GO:0006298
IEA
InterPromismatch repair
GO:0000002
ISO
PLAZA Integrative Orthologymitochondrial genome maintenance AT3G24320
GO:0032042
ISO
PLAZA Integrative Orthologymitochondrial DNA metabolic process AT3G24320
GO:0009408
ISO
PLAZA Integrative Orthologyresponse to heat AT3G24320
GO:0006974
IEA
GOA Databasecellular response to DNA damage stimulus

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0008094
IBA
GOA DatabaseATPase, acting on DNA
GO:0030983
IBA
IEA
GOA Databasemismatched DNA binding
GO:0030983
IEA
InterPromismatched DNA binding
GO:0005524
IEA
GOA DatabaseATP binding
GO:0005524
IEA
InterProATP binding
GO:0000166
IEA
GOA Databasenucleotide binding
GO:0003677
IEA
GOA DatabaseDNA binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009536
ISO
PLAZA Integrative Orthologyplastid AT3G24320
GO:0042651
ISO
PLAZA Integrative Orthologythylakoid membrane AT3G24320
GO:0005739
ISO
PLAZA Integrative Orthologymitochondrion AT3G24320
GO:0009507
ISO
PLAZA Integrative Orthologychloroplast AT3G24320
GO:0032300
IBA
GOA Databasemismatch repair complex

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR016151 DNA mismatch repair protein MutS, N-terminal
IPR007695 DNA mismatch repair protein MutS-like, N-terminal
IPR000432 DNA mismatch repair protein MutS, C-terminal
IPR045076 DNA mismatch repair MutS family
IPR027417 P-loop containing nucleoside triphosphate hydrolase
Mapman id Description
13.5.8.5 Cell cycle organisation.organellar DNA replication.genome stability maintenance.regulatory factor (MSH1)