Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_699.g19255 Utricularia gibba HOM05D006136 ORTHO05D007244 3.2e-237 824.7 415 100.0
MSTRG.26507 Avicennia marina HOM05D006136 ORTHO05D007244 6.3e-76 288.9 424 41.0
SalBow5G5580 Salvia bowleyana HOM05D006136 ORTHO05D007244 1.2e-74 284.6 411 43.1
Migut.L01610 Erythranthe guttata HOM05D006136 ORTHO05D007244 1.0e-73 281.6 415 41.2
Oeu000955.1 Olea europaea HOM05D006136 ORTHO05D007244 1.0e-70 271.6 414 42.3
Cc06_g23510 Coffea canephora HOM05D006136 ORTHO05D007244 1.6e-68 264.2 412 39.1
Cfa012873 Carpinus fangiana HOM05D006136 ORTHO05D007244 3.3e-61 240.0 270 48.1
CSS0003139 Camellia sinensis var. sinensis HOM05D006136 ORTHO05D007244 1.3e-60 238.0 417 36.5
PSO478G4925 Papaver somniferum HOM05D006136 ORTHO05D007244 1.8e-59 234.2 449 35.0
QL05p072260 Quercus lobata HOM05D000321 ORTHO05D007244 1.8e-59 234.2 425 36.9
CSS0019621 Camellia sinensis var. sinensis HOM05D006136 ORTHO05D007244 2.4e-59 233.8 423 36.2
Dinv12632 Davidia involucrata HOM05D006136 ORTHO05D002774 4.1e-59 233.0 259 47.9
QL11p005727 Quercus lobata HOM05D006136 ORTHO05D007244 4.5e-58 229.6 425 36.0
Eucgr.C02149 Eucalyptus grandis HOM05D006136 ORTHO05D007244 5.9e-58 229.2 263 48.3
Aqoxy7G02564 Aquilegia oxysepala HOM05D006136 ORTHO05D007244 7.7e-58 228.8 455 36.5
Sopen07g022390 Solanum pennellii HOM05D006136 ORTHO05D007244 1.3e-57 228.0 272 45.6
GSVIVG01038350001 Vitis vinifera HOM05D006136 ORTHO05D007244 6.5e-57 225.7 252 49.6
Lj9A583T57 Lonicera japonica HOM05D006136 ORTHO05D007244 8.5e-57 225.3 463 34.1
PSO782G1690 Papaver somniferum HOM05D006136 ORTHO05D007244 8.5e-57 225.3 449 34.3
EL10Ac2g03821 Beta vulgaris HOM05D006136 ORTHO05D007244 3.2e-56 223.4 214 50.5
Nitab4.5_0000807g0150 Nicotiana tabacum HOM05D006136 ORTHO05D007244 3.2e-56 223.4 276 44.6
AUR62039148 Chenopodium quinoa HOM05D006136 ORTHO05D007244 5.5e-56 222.6 243 47.7
PGSC0003DMG400013541 Solanum tuberosum HOM05D006136 ORTHO05D007244 5.5e-56 222.6 277 44.0
Cpa.g.sc46.113 Carica papaya HOM05D006136 ORTHO05D007244 9.4e-56 221.9 281 43.1
Manes.02G224001 Manihot esculenta HOM05D006136 ORTHO05D007244 9.4e-56 221.9 424 34.9
AUR62009114 Chenopodium quinoa HOM05D000163 ORTHO05D007244 2.1e-55 220.7 359 37.9
ECA234G2139 Erigeron canadensis HOM05D006136 ORTHO05D007244 6.1e-55 219.2 421 34.9
Lsat_1_v5_gn_5_82020 Lactuca sativa HOM05D006136 ORTHO05D007244 2.3e-54 217.2 249 46.2
Manes.11G052190 Manihot esculenta HOM05D006136 ORTHO05D007244 2.3e-54 217.2 423 35.7
TWI32G0914 Tripterygium wilfordii HOM05D006136 ORTHO05D007244 2.3e-54 217.2 280 43.2
HanXRQChr10g0309281 Helianthus annuus HOM05D006136 ORTHO05D007244 2.0e-53 214.2 313 39.6
Lalb_Chr08g0233201 Lupinus albus HOM05D006136 ORTHO05D007244 4.4e-53 213.0 269 43.9
BolC9t57856H Brassica oleracea HOM05D006136 ORTHO05D007244 5.7e-53 212.6 392 37.8
Sc06g0001020 Simmondsia chinensis HOM05D006136 ORTHO05D007244 9.7e-53 211.8 404 36.6
CiPaw.07G237600 Carya illinoinensis HOM05D006136 ORTHO05D007244 1.3e-52 211.5 273 45.8
SGA_v2.0_scaffold21G09584 Striga asiatica HOM05D006136 ORTHO05D007244 1.3e-52 211.5 427 35.4
BcaC04g19905 Brassica carinata HOM05D006136 ORTHO05D007244 2.2e-52 210.7 212 51.9
C09p50030 Brassica napus HOM05D006136 ORTHO05D007244 2.2e-52 210.7 392 37.5
A10p16060 Brassica napus HOM05D006136 ORTHO05D007244 3.7e-52 209.9 212 51.9
BraA10t43623Z Brassica rapa HOM05D006136 ORTHO05D007244 4.8e-52 209.5 212 51.9
CsaV3_1G044190 Cucumis sativus L. HOM05D006136 ORTHO05D007244 4.8e-52 209.5 409 34.7
Peaxi162Scf00474g00018 Petunia axillaris HOM05D006136 ORTHO05D007244 6.3e-52 209.1 382 36.6
TAR626G0660 Trochodendron aralioides HOM05D006136 ORTHO05D007244 6.3e-52 209.1 406 35.0
Gohir.A08G016500 Gossypium hirsutum HOM05D006136 ORTHO05D007244 1.1e-51 208.4 311 41.2
arahy.Tifrunner.gnm1.ann1.46MDAV Arachis hypogaea HOM05D006136 ORTHO05D007244 1.4e-51 208.0 389 36.5
Prupe.1G000700 Prunus persica HOM05D006136 ORTHO05D007244 1.4e-51 208.0 301 43.9
Actinidia33603 Actinidia chinensis HOM05D006136 ORTHO05D007244 2.4e-51 207.2 265 43.4
Glyma.09G084800 Glycine max HOM05D006136 ORTHO05D007244 2.4e-51 207.2 424 37.3
Lj6g0010551 Lotus japonicus HOM05D006136 ORTHO05D007244 2.4e-51 207.2 419 34.6
Sp6g19810 Schrenkiella parvula HOM05D006136 ORTHO05D007244 3.1e-51 206.8 211 49.8
Psat1g019160 Pisum sativum HOM05D006136 ORTHO05D007244 5.3e-51 206.1 430 36.0
Ciclev10007497m.g Citrus clementina HOM05D006136 ORTHO05D007244 7.0e-51 205.7 276 45.3
PGR044G0474 Punica granatum HOM05D006136 ORTHO05D007244 7.0e-51 205.7 357 38.9
MELO3C010014.2 Cucumis melo HOM05D006136 ORTHO05D007244 1.2e-50 204.9 417 33.8
DCAR_020445 Daucus carota HOM05D006136 ORTHO05D002774 1.2e-50 204.9 448 33.3
ATR0626G098 Amborella trichopoda HOM05D006136 ORTHO05D007244 2.0e-50 204.1 261 43.7
CARHR271930 Cardamine hirsuta HOM05D006136 ORTHO05D007244 2.0e-50 204.1 376 37.8
Glyma.15G193100 Glycine max HOM05D006136 ORTHO05D007244 2.0e-50 204.1 422 36.5
Potri.018G151300 Populus trichocarpa HOM05D006136 ORTHO05D007244 2.0e-50 204.1 271 44.6
COL.COLO4_09001 Corchorus olitorius HOM05D006136 ORTHO05D007244 7.7e-50 202.2 266 42.5
Gohir.D08G026500 Gossypium hirsutum HOM05D006136 ORTHO05D007244 7.7e-50 202.2 306 41.5
Medtr2g048340 Medicago truncatula HOM05D006136 ORTHO05D007244 7.7e-50 202.2 221 47.1
Atru.chr7.1014 Acer truncatum HOM05D006136 ORTHO05D007244 2.2e-49 200.7 420 34.8
Thhalv10012942m.g Eutrema salsugineum HOM05D006136 ORTHO05D007244 2.2e-49 200.7 206 50.0
BcaB08g36165 Brassica carinata HOM05D006136 ORTHO05D007244 2.9e-49 200.3 391 36.1
Gorai.004G023000 Gossypium raimondii HOM05D006136 ORTHO05D007244 2.9e-49 200.3 306 41.5
Ca_02520_v3 Cicer arietinum L. HOM05D006136 ORTHO05D007244 5.0e-49 199.5 287 40.4
HPP92_017041 Vanilla planifolia HOM05D006136 ORTHO05D007244 5.0e-49 199.5 255 43.5
Phvul.009G217200 Phaseolus vulgaris HOM05D006136 ORTHO05D007244 6.5e-49 199.1 221 48.4
THA.LOC104803376 Tarenaya hassleriana HOM05D006136 ORTHO05D007244 6.5e-49 199.1 417 34.5
Sabra18G0127000 Salix brachista HOM05D006136 ORTHO05D007244 1.2e-47 194.9 415 34.5
AL8G34230 Arabidopsis lyrata HOM05D006136 ORTHO05D007244 2.1e-47 194.1 411 33.3
vmacro17832 Vaccinium macrocarpon HOM05D006136 ORTHO05D007244 8.0e-47 192.2 470 33.0
Aa31LG3G13960 Aethionema arabicum HOM05D006136 ORTHO05D007244 1.8e-46 191.0 424 33.7
Carub.0008s1868 Capsella rubella HOM05D006136 ORTHO05D007244 1.8e-46 191.0 412 35.0
Thecc.09G202200 Theobroma cacao HOM05D006136 ORTHO05D007244 5.2e-46 189.5 375 35.5
Rhsim08G0117200 Rhododendron simsii HOM05D006136 ORTHO05D007244 1.2e-45 188.3 497 31.4
ClCG03G011600 Citrullus lanatus HOM05D006136 ORTHO05D007244 1.5e-45 188.0 421 32.5
Duzib170G0744 Durio zibethinus HOM05D006136 ORTHO05D007244 2.0e-45 187.6 233 44.2
Zm00001eb209220 Zea mays HOM05D006136 ORTHO05D007244 2.0e-45 187.6 424 33.7
MD04G1000700 Malus domestica HOM05D006136 ORTHO05D007244 2.6e-45 187.2 411 32.8
FAN12G3399 Fragaria x ananassa HOM05D006136 ORTHO05D007244 5.7e-45 186.0 427 34.2
MBI16_g40727_MAGBIO Magnolia biondii HOM05D006136 ORTHO05D007244 5.7e-45 186.0 438 31.5
Nn5g26953 Nelumbo nucifera HOM05D006136 ORTHO05D007244 9.7e-45 185.3 409 33.3
Os02g0138200 Oryza sativa ssp. japonica HOM05D006136 ORTHO05D007244 1.7e-44 184.5 210 44.8
AT5G58130 Arabidopsis thaliana HOM05D006136 ORTHO05D007244 2.2e-44 184.1 413 33.4
RcHm_v2.0_Chr4g0384741 Rosa chinensis HOM05D006136 ORTHO05D007244 2.2e-44 184.1 410 33.4
FAN17G2087 Fragaria x ananassa HOM05D006136 ORTHO05D007244 3.7e-44 183.3 427 34.0
FAN12G0507 Fragaria x ananassa HOM05D006136 ORTHO05D007244 8.2e-44 182.2 204 47.1
Nitab4.5_0000170g0140 Nicotiana tabacum HOM05D006136 ORTHO05D007244 1.2e-42 178.3 454 30.4
CANSAT01G2594 Cannabis sativa HOM05D006136 ORTHO05D007244 7.7e-42 175.6 221 41.6
SEGI_05126 Sequoiadendron giganteum HOM05D006136 ORTHO05D007244 8.5e-41 172.2 231 42.9
FAN22G1396 Fragaria x ananassa HOM05D006136 ORTHO05D007244 9.4e-40 168.7 357 34.7
VMungo1309G0146 Vigna mungo HOM05D006136 ORTHO05D007244 1.6e-39 167.9 416 30.8
CDE05G3219 Ceratophyllum demersum HOM05D006136 ORTHO05D007244 1.0e-38 165.2 367 35.4
TPR.G18712 Trifolium pratense HOM05D006136 ORTHO05D007244 1.8e-38 164.5 378 33.3
Haze_21244 Corylus avellana HOM05D006136 ORTHO05D007244 3.4e-37 160.2 201 45.8
GSVIVG01038333001 Vitis vinifera HOM05D006136 ORTHO05D007244 7.0e-35 152.5 151 53.0
PGR044G0304 Punica granatum HOM05D006136 ORTHO05D007244 2.9e-33 147.1 277 37.9
Solyc07g042740.3 Solanum lycopersicum HOM05D006136 ORTHO05D007244 1.0e-30 138.7 207 40.6
SMO367G1245 Selaginella moellendorffii HOM05D006136 ORTHO05D007244 5.4e-27 126.3 216 38.9
arahy.Tifrunner.gnm1.ann1.27MYTD Arachis hypogaea HOM05D006136 ORTHO05D007244 1.5e-24 118.2 136 44.1
Lj1g0026291 Lotus japonicus HOM05D006136 ORTHO05D007244 1.5e-24 118.2 272 31.6
Mapoly0169s0023 Marchantia polymorpha HOM05D006136 ORTHO05D007244 2.5e-24 117.5 318 31.1
arahy.Tifrunner.gnm1.ann1.QC7K1D Arachis hypogaea HOM05D006136 ORTHO05D007244 3.0e-22 110.5 94 55.3
arahy.Tifrunner.gnm1.ann1.Q88MA9 Arachis hypogaea HOM05D006136 ORTHO05D007244 5.7e-21 106.3 130 42.3
RcHm_v2.0_Chr5g0003141 Rosa chinensis HOM05D006136 ORTHO05D007244 1.3e-20 105.1 338 29.0
AagrBONN_evm.TU.Sc2ySwM_228.2439 Anthoceros agrestis HOM05D006136 ORTHO05D007244 5.4e-19 99.8 299 29.1
Pp3c1_8430 Physcomitrium patens HOM05D006136 ORTHO05D007244 1.1e-16 92.0 100 45.0
Glyma.07G231200 Glycine max HOM05D003235 ORTHO05D007244 1.8e-14 84.7 81 49.4
arahy.Tifrunner.gnm1.ann1.SWI1TY Arachis hypogaea HOM05D006136 ORTHO05D007244 7.5e-13 79.3 117 41.0
CBR_g39420 Chara braunii HOM05D006136 ORTHO05D007244 3.5e-10 70.5 149 32.2
Hma1.2p1_2895F.1_g329976 Hydrangea macrophylla HOM05D006136 ORTHO05D007244 3.0e-09 67.4 59 52.5
MBI16_g40728_MAGBIO Magnolia biondii HOM05D006136 ORTHO05D007244 6.2e-07 59.7 70 48.6
C02p13590 Brassica napus HOM05D006136 ORTHO05D007244 3.1e-06 57.4 78 42.3
BolC2t07471H Brassica oleracea HOM05D006136 ORTHO05D007244 3.1e-06 57.4 78 42.3
BcaC03g14120 Brassica carinata HOM05D009052 ORTHO05D011796 4.0e-06 57.0 117 35.0
TPR.G20669 Trifolium pratense HOM05D006136 ORTHO05D007244 5.2e-06 56.6 73 49.3


User provided reference genes

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