Gene: AT5G58130

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT5G58130
  • Transcript Identifier AT5G58130.1
  • Gene Type Coding gene
  • Location Chr5 : 23521190-23523766 : negative

Gene Family Information

  • ID HOM05D006136
  • #Genes/#Species 129/96
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT5G58130.1
  • symbol ROS3
  • full_name REPRESSOR OF SILENCING 3
  • uniprot Q9FGT1

Descriptions

  • Description RNA-binding (RRM/RBD/RNP motifs) family protein
  • Computational description REPRESSOR OF SILENCING 3 (ROS3); CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 (InterPro:IPR000504), Nucleotide-binding, alpha-beta plait (InterPro:IPR012677); Has 14321 Blast hits to 7664 proteins in 903 species: Archae - 313; Bacteria - 6242; Metazoa - 2615; Fungi - 1429; Plants - 503; Viruses - 131; Other Eukaryotes - 3088 (source: NCBI BLink).
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:1901535
IMP
Gene Ontologyregulation of DNA demethylation1
GO:0031047
IEA
GOA Databasegene silencing by RNA
GO:0080111
IMP
Gene OntologyDNA demethylation1
GO:0060966
IMP
Gene Ontologyregulation of gene silencing by RNA1
GO:0016458
IMP
Gene Ontologygene silencing1

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003676
IEA
GOA Databasenucleic acid binding
GO:0003676
IEA
InterPronucleic acid binding
GO:0003723
IEA
GOA DatabaseRNA binding
GO:0003723
IDA
Gene OntologyRNA binding1
GO:0003727
IDA
Gene Ontologysingle-stranded RNA binding1

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
IEA
GOA Databasenucleus
GO:0005634
IDA
ISM, IBA
Gene Ontologynucleus1 2
GO:0005730
IEA
GOA Databasenucleolus
GO:0005730
IDA
Gene Ontologynucleolus1
GO:0005654
IEA
GOA Databasenucleoplasm
GO:0005654
IDA
Gene Ontologynucleoplasm1

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR034138 Nucleolar protein 8, RNA recognition motif
IPR035979 RNA-binding domain superfamily
IPR000504 RNA recognition motif domain
IPR012677 Nucleotide-binding alpha-beta plait domain superfamily
Mapman id Description
35.1 not assigned.annotated