Gene: Sopen07g022390

General Information

Structural Information

  • Species Solanum pennellii
  • Gene Identifier Sopen07g022390
  • Transcript Identifier Sopen07g022390.2
  • Gene Type Coding gene
  • Location Spenn-ch07 : 66792742-66796467 : negative

Gene Family Information

  • ID HOM05D006136
  • #Genes/#Species 129/96
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Sopen07g022390.2

Descriptions

  • Description Encodes ROS3 (repressor of silencing 3), a RNA-binding protein required for DNA demethylation. | REPRESSOR OF SILENCING 3 (ROS3) | CONTAINS InterPro DOMAIN/s: RNA recognition motif, RNP-1 , Nucleotide-binding, alpha-beta plait
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0016458
ISO
PLAZA Integrative Orthologygene silencing AT5G58130
GO:0080111
ISO
PLAZA Integrative OrthologyDNA demethylation AT5G58130
GO:0060966
ISO
PLAZA Integrative Orthologyregulation of gene silencing by RNA AT5G58130
GO:1901535
ISO
PLAZA Integrative Orthologyregulation of DNA demethylation AT5G58130

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003676
IEA
InterPronucleic acid binding
GO:0003723
ISO
PLAZA Integrative OrthologyRNA binding AT5G58130
GO:0003727
ISO
PLAZA Integrative Orthologysingle-stranded RNA binding AT5G58130

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
ISO
PLAZA Integrative Orthologynucleus AT5G58130
GO:0005730
ISO
PLAZA Integrative Orthologynucleolus AT5G58130
GO:0005654
ISO
PLAZA Integrative Orthologynucleoplasm AT5G58130

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
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InterPro Description
IPR012677 Nucleotide-binding alpha-beta plait domain superfamily
IPR035979 RNA-binding domain superfamily
IPR034138 Nucleolar protein 8, RNA recognition motif
IPR000504 RNA recognition motif domain
Mapman id Description
35.1 not assigned.annotated