Gene: Nitab4.5_0000170g0140

General Information

Structural Information

  • Species Nicotiana tabacum
  • Gene Identifier Nitab4.5_0000170g0140
  • Transcript Identifier Nitab4.5_0000170g0140.1
  • Gene Type Coding gene
  • Location Nitab4.5_0000170 : 479712-483419 : positive

Gene Family Information

  • ID HOM05D006136
  • #Genes/#Species 129/96
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Nitab4.5_0000170g0140.1
  • SR1-identifier Nta18g22610.1

Descriptions

  • Description RNA recognition motif domain, Nucleotide-binding, alpha-beta plait
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0016458
ISO
PLAZA Integrative Orthologygene silencing AT5G58130
GO:0080111
ISO
PLAZA Integrative OrthologyDNA demethylation AT5G58130
GO:0060966
ISO
PLAZA Integrative Orthologyregulation of gene silencing by RNA AT5G58130
GO:1901535
ISO
PLAZA Integrative Orthologyregulation of DNA demethylation AT5G58130

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003676
IEA
InterPronucleic acid binding
GO:0003723
ISO
PLAZA Integrative OrthologyRNA binding AT5G58130
GO:0003727
ISO
PLAZA Integrative Orthologysingle-stranded RNA binding AT5G58130

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
ISO
PLAZA Integrative Orthologynucleus AT5G58130
GO:0005730
ISO
PLAZA Integrative Orthologynucleolus AT5G58130
GO:0005654
ISO
PLAZA Integrative Orthologynucleoplasm AT5G58130

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
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InterPro Description
IPR035979 RNA-binding domain superfamily
IPR012677 Nucleotide-binding alpha-beta plait domain superfamily
Mapman id Description
35.1 not assigned.annotated