Gene: AUR62009114
General Information
Structural Information
- Species Chenopodium quinoa
- Gene Identifier AUR62009114
- Transcript Identifier AUR62009114-RA
- Gene Type Coding gene
- Location C_Quinoa_Scaffold_3674 : 1006129-1024493 : positive
Gene Family Information
- ID HOM05D000163
- #Genes/#Species 2281/98
- Phylogenetic origin
- ID ORTHO05D007244
- #Genes/#Species 133/94
- Phylogenetic origin
Gene Duplication Information
- Block Duplication Block duplicate
Labels
Identifiers
- id AUR62009114.v1.0
- pacid 36297232
- uniprot A0A803LB75
Descriptions
- Description PUB52: U-box domain-containing protein 52
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0016458 | ISO | PLAZA Integrative Orthology | gene silencing | AT5G58130 |
| GO:1901535 | ISO | PLAZA Integrative Orthology | regulation of DNA demethylation | AT5G58130 |
| GO:0060966 | ISO | PLAZA Integrative Orthology | regulation of gene silencing by RNA | AT5G58130 |
| GO:0080111 | ISO | PLAZA Integrative Orthology | DNA demethylation | AT5G58130 |
| GO:0006468 | IEA | GOA Database | protein phosphorylation | |
| GO:0006468 | IEA | InterPro | protein phosphorylation |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0003727 | ISO | PLAZA Integrative Orthology | single-stranded RNA binding | AT5G58130 |
| GO:0003723 | ISO | PLAZA Integrative Orthology | RNA binding | AT5G58130 |
| GO:0003676 | IEA | GOA Database | nucleic acid binding | |
| GO:0003676 | IEA | InterPro | nucleic acid binding | |
| GO:0005524 | IEA | GOA Database | ATP binding | |
| GO:0005524 | IEA | InterPro | ATP binding | |
| GO:0004672 | IEA | GOA Database | protein kinase activity | |
| GO:0004672 | IEA | InterPro | protein kinase activity |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005654 | ISO | PLAZA Integrative Orthology | nucleoplasm | AT5G58130 |
| GO:0005730 | ISO | PLAZA Integrative Orthology | nucleolus | AT5G58130 |
| GO:0005634 | ISO | PLAZA Integrative Orthology | nucleus | AT5G58130 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR034138 | Nucleolar protein 8, RNA recognition motif |
| IPR035979 | RNA-binding domain superfamily |
| IPR014729 | Rossmann-like alpha/beta/alpha sandwich fold |
| IPR011009 | Protein kinase-like domain superfamily |
| IPR000719 | Protein kinase domain |
| IPR036188 | FAD/NAD(P)-binding domain superfamily |
| IPR000504 | RNA recognition motif domain |
| IPR012677 | Nucleotide-binding alpha-beta plait domain superfamily |
| Mapman id | Description |
|---|---|
| 18.4.1.39.2 | Protein modification.phosphorylation.TKL protein kinase superfamily.RLCK-IX receptor-like protein kinase families.receptor-like protein kinase (RLCK-IXb) |