Gene: Solyc07g042740.3

General Information

Structural Information

  • Species Solanum lycopersicum
  • Gene Identifier Solyc07g042740.3
  • Transcript Identifier Solyc07g042740.3.1
  • Gene Type Coding gene
  • Location SL4.0ch07 : 56102190-56103088 : negative

Gene Family Information

  • ID HOM05D006136
  • #Genes/#Species 129/96
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Solyc07g042740.3.1
  • uniprot A0A3Q7HCE4
  • gene_id Solyc07g042740

Descriptions

  • Description RNA-binding (RRM/RBD/RNP motifs) family protein (AHRD V3.3 *-* Q9FGT1_ARATH)
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0016458
ISO
PLAZA Integrative Orthologygene silencing AT5G58130
GO:0080111
ISO
PLAZA Integrative OrthologyDNA demethylation AT5G58130
GO:0060966
ISO
PLAZA Integrative Orthologyregulation of gene silencing by RNA AT5G58130
GO:1901535
ISO
PLAZA Integrative Orthologyregulation of DNA demethylation AT5G58130

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003676
ISO
PLAZA Homology (enrichment)nucleic acid binding HOM05D006136
GO:0003723
ISO
PLAZA Integrative OrthologyRNA binding AT5G58130
GO:0003727
ISO
PLAZA Integrative Orthologysingle-stranded RNA binding AT5G58130

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
IBA
GOA Databasenucleus
GO:0005730
ISO
PLAZA Integrative Orthologynucleolus AT5G58130
GO:0005654
ISO
PLAZA Integrative Orthologynucleoplasm AT5G58130

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
No InterPro domains detected for this gene.
Mapman id Description
35.1 not assigned.annotated