Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_60.g25783 Utricularia gibba HOM05D006779 ORTHO05D008491 1.1e-123 446.8 247 100.0
SalBow6G0615 Salvia bowleyana HOM05D006779 ORTHO05D008491 1.2e-77 293.9 257 69.6
Migut.B00314 Erythranthe guttata HOM05D006779 ORTHO05D008491 6.3e-76 288.1 259 66.8
SGA_v2.0_scaffold90G27693 Striga asiatica HOM05D006779 ORTHO05D008491 8.6e-73 277.7 253 61.3
MSTRG.16763 Avicennia marina HOM05D006779 ORTHO05D008491 3.3e-72 275.8 258 65.5
SGA_v2.0_scaffold90G27688 Striga asiatica HOM05D006779 ORTHO05D008491 7.3e-72 274.6 253 60.9
Oeu064516.1 Olea europaea HOM05D006779 ORTHO05D008491 1.6e-71 273.5 256 62.9
Dinv23582 Davidia involucrata HOM05D006779 ORTHO05D008491 2.6e-69 266.2 259 64.1
Haze_01903 Corylus avellana HOM05D006779 ORTHO05D008491 1.4e-67 260.4 256 62.9
GSVIVG01031784001 Vitis vinifera HOM05D006779 ORTHO05D008491 2.0e-66 256.5 255 62.7
Potri.009G105500 Populus trichocarpa HOM05D006779 ORTHO05D008491 1.3e-65 253.8 256 62.9
Sabra09G0080600 Salix brachista HOM05D006779 ORTHO05D008491 5.0e-65 251.9 256 62.1
PGR142G0644 Punica granatum HOM05D006779 ORTHO05D008491 1.1e-64 250.8 255 60.8
Cc02_g18560 Coffea canephora HOM05D006779 ORTHO05D008491 1.5e-64 250.4 262 61.1
Solyc01g108430.3 Solanum lycopersicum HOM05D006779 ORTHO05D008491 2.5e-64 249.6 263 60.1
Lj5C207T4 Lonicera japonica HOM05D006779 ORTHO05D008491 4.3e-64 248.8 255 63.1
CiPaw.05G054000 Carya illinoinensis HOM05D006779 ORTHO05D008491 7.3e-64 248.1 256 61.7
PGSC0003DMG400025811 Solanum tuberosum HOM05D006779 ORTHO05D008491 9.5e-64 247.7 263 59.3
QL11p037315 Quercus lobata HOM05D006779 ORTHO05D008491 1.6e-63 246.9 256 61.7
Actinidia00459 Actinidia chinensis HOM05D006779 ORTHO05D008491 2.8e-63 246.1 255 57.3
Sopen01g050660 Solanum pennellii HOM05D006779 ORTHO05D008491 3.6e-63 245.7 263 58.6
Thecc.02G097400 Theobroma cacao HOM05D006779 ORTHO05D008491 6.2e-63 245.0 254 62.2
Dinv42131 Davidia involucrata HOM05D006779 ORTHO05D008491 8.1e-63 244.6 262 59.2
FAN20G2937 Fragaria x ananassa HOM05D006779 ORTHO05D008491 1.8e-62 243.4 256 59.4
FvH4_2g06680 Fragaria vesca HOM05D006779 ORTHO05D008491 3.1e-62 242.7 256 59.4
FAN24G0787 Fragaria x ananassa HOM05D006779 ORTHO05D008491 3.1e-62 242.7 256 59.4
FAN15G3147 Fragaria x ananassa HOM05D006779 ORTHO05D008491 4.0e-62 242.3 256 59.0
Prupe.8G119200 Prunus persica HOM05D006779 ORTHO05D008491 5.2e-62 241.9 256 62.1
CsaV3_7G008730 Cucumis sativus L. HOM05D006779 ORTHO05D008491 8.9e-62 241.1 255 60.4
RcHm_v2.0_Chr6g0258731 Rosa chinensis HOM05D006779 ORTHO05D008491 1.5e-61 240.4 256 58.2
Nitab4.5_0004334g0110 Nicotiana tabacum HOM05D006779 ORTHO05D008491 2.6e-61 239.6 265 58.9
Eucgr.I01169 Eucalyptus grandis HOM05D006779 ORTHO05D008491 5.8e-61 238.4 254 57.5
Manes.15G142500 Manihot esculenta HOM05D006779 ORTHO05D008491 7.5e-61 238.0 256 61.7
Sed0011670 Sechium edule HOM05D006779 ORTHO05D008491 3.7e-60 235.7 255 60.0
Nitab4.5_0005583g0020 Nicotiana tabacum HOM05D006779 ORTHO05D008491 1.1e-59 234.2 265 58.5
CSS0011815 Camellia sinensis var. sinensis HOM05D000591 ORTHO05D000579 3.2e-59 232.6 259 53.3
Psat7g121840 Pisum sativum HOM05D006779 ORTHO05D008491 3.2e-59 232.6 259 60.2
Glyma.01G146900 Glycine max HOM05D006779 ORTHO05D008491 4.1e-59 232.3 255 59.6
Glyma.10G112900 Glycine max HOM05D006779 ORTHO05D008491 4.1e-59 232.3 255 59.6
Gorai.005G240600 Gossypium raimondii HOM05D006779 ORTHO05D008491 5.4e-59 231.9 255 60.0
CAN.G322.16 Capsicum annuum HOM05D006779 ORTHO05D008491 7.1e-59 231.5 257 59.5
Gohir.A03G191700 Gossypium hirsutum HOM05D006779 ORTHO05D008491 1.2e-58 230.7 255 60.0
Gohir.D02G212600 Gossypium hirsutum HOM05D006779 ORTHO05D008491 1.6e-58 230.3 255 59.6
Phvul.007G247000 Phaseolus vulgaris HOM05D006779 ORTHO05D008491 4.6e-58 228.8 255 54.5
Sc18g0004890 Simmondsia chinensis HOM05D006779 ORTHO05D008491 1.7e-57 226.9 254 60.6
Atru.chr5.2773 Acer truncatum HOM05D006779 ORTHO05D008491 2.3e-57 226.5 259 57.5
TWI79G0004 Tripterygium wilfordii HOM05D006779 ORTHO05D008491 3.0e-57 226.1 258 60.1
Ciclev10029963m.g Citrus clementina HOM05D006779 ORTHO05D008491 3.9e-57 225.7 258 59.3
Nn5g30192 Nelumbo nucifera HOM05D006779 ORTHO05D008491 3.9e-57 225.7 259 59.1
Lalb_Chr09g0328181 Lupinus albus HOM05D006779 ORTHO05D008491 8.6e-57 224.6 256 57.4
Glyma.02G159500 Glycine max HOM05D006779 ORTHO05D008491 1.5e-56 223.8 255 59.6
arahy.Tifrunner.gnm1.ann1.8ZG09Z Arachis hypogaea HOM05D006779 ORTHO05D008491 1.9e-56 223.4 258 57.4
arahy.Tifrunner.gnm1.ann1.T066AP Arachis hypogaea HOM05D006779 ORTHO05D008491 2.5e-56 223.0 256 57.4
MD05G1075500 Malus domestica HOM05D006779 ORTHO05D008491 3.3e-56 222.6 255 56.9
Peaxi162Scf00016g01637 Petunia axillaris HOM05D006779 ORTHO05D008491 3.3e-56 222.6 248 60.5
DCAR_029018 Daucus carota HOM05D000144 ORTHO05D003364 4.3e-56 222.2 259 58.3
Aqoxy6G01411 Aquilegia oxysepala HOM05D006779 ORTHO05D008491 1.4e-54 217.2 259 58.7
HPP92_004257 Vanilla planifolia HOM05D006779 ORTHO05D008491 1.4e-54 217.2 252 56.3
Rhsim11G0168500 Rhododendron simsii HOM05D006779 ORTHO05D008491 3.1e-54 216.1 291 48.5
vmacro02181 Vaccinium macrocarpon HOM05D006779 ORTHO05D008491 3.1e-54 216.1 295 48.5
Ca_18655_v3 Cicer arietinum L. HOM05D006779 ORTHO05D008491 6.8e-54 214.9 255 57.3
TWI31G0027 Tripterygium wilfordii HOM05D006779 ORTHO05D008491 8.9e-54 214.5 258 57.8
CANSAT25G0176 Cannabis sativa HOM05D006779 ORTHO05D008491 3.4e-53 212.6 258 55.8
Aa31LG10G4420 Aethionema arabicum HOM05D006779 ORTHO05D008491 4.9e-52 208.8 257 54.5
arahy.Tifrunner.gnm1.ann1.QJKD6Y Arachis hypogaea HOM05D006779 ORTHO05D008491 8.4e-52 208.0 258 56.2
COL.COLO4_32686 Corchorus olitorius HOM05D006779 ORTHO05D008491 1.1e-51 207.6 254 57.9
Sp1g36470 Schrenkiella parvula HOM05D006779 ORTHO05D008491 1.9e-51 206.8 253 53.4
AT1G49590 Arabidopsis thaliana HOM05D006779 ORTHO05D008491 2.4e-51 206.5 249 55.4
ECA234G4762 Erigeron canadensis HOM05D006779 ORTHO05D008491 3.2e-51 206.1 254 54.3
MBI02_g21199_MAGBIO Magnolia biondii HOM05D006779 ORTHO05D008491 3.2e-51 206.1 274 53.6
ClCG02G005780 Citrullus lanatus HOM05D006779 ORTHO05D008491 4.1e-51 205.7 297 50.8
AUR62034187 Chenopodium quinoa HOM05D006779 ORTHO05D008491 9.2e-51 204.5 253 55.7
PSO675G5018 Papaver somniferum HOM05D006779 ORTHO05D008491 2.1e-50 203.4 257 55.6
Thhalv10011741m.g Eutrema salsugineum HOM05D006779 ORTHO05D008491 3.5e-50 202.6 253 53.0
EL10Ac3g06870 Beta vulgaris HOM05D006779 ORTHO05D008491 1.7e-49 200.3 255 55.7
Lj4g0006122 Lotus japonicus HOM05D006779 ORTHO05D008491 2.3e-49 199.9 252 56.3
PSO541G4058 Papaver somniferum HOM05D006779 ORTHO05D008491 2.3e-49 199.9 257 54.9
Lsat_1_v5_gn_5_113321 Lactuca sativa HOM05D006779 ORTHO05D008491 3.0e-49 199.5 249 48.6
Ah.04g152710 Amaranthus hybridus HOM05D006779 ORTHO05D008491 1.9e-48 196.8 253 51.4
Hund00325 Selenicereus undatus HOM05D006779 ORTHO05D008491 1.2e-47 194.1 256 55.9
HanXRQChr10g0303251 Helianthus annuus HOM05D006779 ORTHO05D008491 2.8e-47 193.0 248 54.0
AUR62022456 Chenopodium quinoa HOM05D006779 ORTHO05D008491 6.2e-47 191.8 293 49.1
Medtr4g086640 Medicago truncatula HOM05D006779 ORTHO05D008491 6.2e-47 191.8 252 55.6
AL1G56960 Arabidopsis lyrata HOM05D006779 ORTHO05D008491 5.2e-46 188.7 258 51.9
Carub.0001s3879 Capsella rubella HOM05D006779 ORTHO05D008491 1.7e-44 183.7 251 53.0
BolC6t35591H Brassica oleracea HOM05D006779 ORTHO05D008491 5.4e-43 178.7 251 48.6
A06p03540 Brassica napus HOM05D006779 ORTHO05D008491 7.1e-43 178.3 250 47.6
BraA06t23562Z Brassica rapa HOM05D006779 ORTHO05D008491 1.3e-41 174.1 250 48.4
CDE06G1966 Ceratophyllum demersum HOM05D006779 ORTHO05D008491 5.1e-41 172.2 246 47.2
BcaNung06359 Brassica carinata HOM05D006779 ORTHO05D008491 1.5e-40 170.6 250 47.6
Zm00001eb373090 Zea mays HOM05D006779 ORTHO05D008491 1.8e-38 163.7 253 51.0
SHI05379 Sapria himalayana HOM05D006779 ORTHO05D008491 3.1e-38 162.9 257 47.1
MELO3C018438.2 Cucumis melo HOM05D006779 ORTHO05D008491 9.9e-37 157.9 209 56.0
ATR0097G032 Amborella trichopoda HOM05D006779 ORTHO05D008491 1.7e-36 157.1 237 43.9
Mapoly0157s0003 Marchantia polymorpha HOM05D006779 ORTHO05D008491 1.0e-33 147.9 297 42.8
AagrBONN_evm.TU.Sc2ySwM_344.4302 Anthoceros agrestis HOM05D006779 ORTHO05D008491 3.6e-31 139.4 287 41.5
TAR628G0388 Trochodendron aralioides HOM05D006779 ORTHO05D008491 1.2e-29 134.4 90 71.1
Pp3c14_26080 Physcomitrium patens HOM05D006779 ORTHO05D008491 9.9e-29 131.3 299 40.5
SMO367G0139 Selaginella moellendorffii HOM05D006779 ORTHO05D008491 8.4e-28 128.3 274 39.8
Cpa.g.sc62.36 Carica papaya HOM05D006779 ORTHO05D008491 1.4e-27 127.5 100 63.0
HPP92_004235 Vanilla planifolia HOM05D006779 ORTHO05D008491 9.3e-27 124.8 208 50.5
FAN20G1913 Fragaria x ananassa HOM05D006779 ORTHO05D008491 1.8e-25 120.6 150 58.7
CBR_g17671 Chara braunii HOM05D006779 ORTHO05D008491 2.3e-25 120.2 333 35.4
C06p04620 Brassica napus HOM05D006779 ORTHO05D008491 1.5e-24 117.5 208 45.2
TPR.G23511 Trifolium pratense HOM05D006779 ORTHO05D008491 3.1e-22 109.8 70 74.3
Os06g0215200 Oryza sativa ssp. japonica HOM05D006779 ORTHO05D008491 4.0e-22 109.4 70 72.9
CSS0024784 Camellia sinensis var. sinensis HOM05D006779 ORTHO05D008491 1.0e-20 104.8 181 42.5
AUR62042088 Chenopodium quinoa HOM05D006779 ORTHO05D008491 2.2e-20 103.6 196 46.9
CARHR039640 Cardamine hirsuta HOM05D006779 ORTHO05D008491 2.9e-20 103.2 146 58.2
CSS0021002 Camellia sinensis var. sinensis HOM05D006779 ORTHO05D008491 1.9e-19 100.5 181 42.0
TPR.G23531 Trifolium pratense HOM05D006779 ORTHO05D008491 4.2e-19 99.4 147 55.1
CDE03G0027 Ceratophyllum demersum HOM05D006779 ORTHO05D008491 6.9e-14 82.0 246 34.6
CSS0022737 Camellia sinensis var. sinensis HOM05D006779 ORTHO05D008491 2.1e-10 70.5 167 36.5
CSS0005405 Camellia sinensis var. sinensis HOM05D006779 ORTHO05D008491 1.3e-09 67.8 143 40.6
CSS0011003 Camellia sinensis var. sinensis HOM05D006779 ORTHO05D008491 1.3e-09 67.8 143 40.6
EL10Ac9g20940 Beta vulgaris HOM05D002686 ORTHO05D003222 3.3e-08 63.2 78 52.6
CSS0034996 Camellia sinensis var. sinensis HOM05D006779 ORTHO05D008491 9.7e-08 61.6 181 34.8
TAR628G1516 Trochodendron aralioides HOM05D006779 ORTHO05D008491 9.7e-08 61.6 120 42.5


User provided reference genes

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