Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
unitig_578.g16412 Utricularia gibba HOM05D006688 ORTHO05D008550 6.0e-216 753.8 364 100.0
MSTRG.10542 Avicennia marina HOM05D006688 ORTHO05D008550 8.0e-160 567.4 364 73.4
Migut.L01521 Erythranthe guttata HOM05D006688 ORTHO05D008550 1.4e-159 566.6 364 73.6
SGA_v2.0_scaffold23G10037 Striga asiatica HOM05D006688 ORTHO05D008550 4.7e-152 541.6 397 66.0
SalBow1G2294 Salvia bowleyana HOM05D006688 ORTHO05D008550 2.2e-149 532.7 395 64.8
Cc06_g11640 Coffea canephora HOM05D006688 ORTHO05D008550 2.3e-143 512.7 369 65.3
Lj7C679G14 Lonicera japonica HOM05D006688 ORTHO05D008550 1.7e-141 506.5 369 65.9
CSS0016517 Camellia sinensis var. sinensis HOM05D006688 ORTHO05D008550 2.4e-140 502.7 371 64.4
Gohir.A06G073600 Gossypium hirsutum HOM05D006688 ORTHO05D008550 9.2e-140 500.7 366 66.4
Oeu000312.2 Olea europaea HOM05D006688 ORTHO05D008550 3.5e-139 498.8 409 60.9
Thecc.09G085200 Theobroma cacao HOM05D006688 ORTHO05D008550 4.6e-139 498.4 365 66.0
Gohir.D06G072500 Gossypium hirsutum HOM05D006688 ORTHO05D008550 6.0e-139 498.0 366 66.1
Gorai.010G084500 Gossypium raimondii HOM05D006688 ORTHO05D008550 6.0e-139 498.0 366 66.1
Atru.chr7.1629 Acer truncatum HOM05D006688 ORTHO05D008550 7.8e-139 497.7 372 65.1
COL.COLO4_18173 Corchorus olitorius HOM05D006688 ORTHO05D008550 1.0e-138 497.3 366 64.5
CiPaw.03G212300 Carya illinoinensis HOM05D006688 ORTHO05D008550 1.1e-137 493.8 369 62.9
TAR636G2732 Trochodendron aralioides HOM05D006688 ORTHO05D008550 3.3e-137 492.3 375 64.0
Dinv42341 Davidia involucrata HOM05D006688 ORTHO05D008550 5.6e-137 491.5 367 64.6
Nitab4.5_0001519g0100 Nicotiana tabacum HOM05D006688 ORTHO05D008550 9.5e-137 490.7 366 65.0
GSVIVG01015172001 Vitis vinifera HOM05D006688 ORTHO05D008550 4.4e-134 481.9 371 65.0
Haze_25940 Corylus avellana HOM05D006688 ORTHO05D008550 5.8e-134 481.5 368 62.0
Sopen07g019540 Solanum pennellii HOM05D006688 ORTHO05D008550 1.3e-133 480.3 366 62.3
Aqoxy7G01159 Aquilegia oxysepala HOM05D006688 ORTHO05D008550 4.9e-133 478.4 373 62.2
Rhsim03G0231200 Rhododendron simsii HOM05D006688 ORTHO05D008550 1.1e-132 477.2 365 64.1
QL02p062093 Quercus lobata HOM05D006688 ORTHO05D008550 3.2e-132 475.7 392 58.9
PGR004G0903 Punica granatum HOM05D006688 ORTHO05D008550 2.3e-130 469.5 367 60.5
Hma1.2p1_0672F.1_g201000 Hydrangea macrophylla HOM05D006688 ORTHO05D008550 3.0e-130 469.2 370 62.4
PSO063G5109 Papaver somniferum HOM05D006688 ORTHO05D008550 3.0e-130 469.2 372 62.1
Nitab4.5_0003606g0020 Nicotiana tabacum HOM05D006688 ORTHO05D008550 1.1e-129 467.2 358 64.2
vmacro06303 Vaccinium macrocarpon HOM05D006688 ORTHO05D008550 3.3e-129 465.7 365 61.9
MD02G1082800 Malus domestica HOM05D006688 ORTHO05D008550 4.3e-129 465.3 371 60.9
RcHm_v2.0_Chr2g0093801 Rosa chinensis HOM05D006688 ORTHO05D008550 9.5e-129 464.2 369 61.5
FvH4_1g07921 Fragaria vesca HOM05D006688 ORTHO05D008550 2.8e-128 462.6 370 61.9
PSO782G0729 Papaver somniferum HOM05D006688 ORTHO05D008550 2.8e-128 462.6 372 61.3
Peaxi162Scf00494g00088 Petunia axillaris HOM05D006688 ORTHO05D008550 4.7e-128 461.8 364 60.2
FAN26G0248 Fragaria x ananassa HOM05D006688 ORTHO05D008550 6.2e-128 461.5 370 61.9
Manes.03G036200 Manihot esculenta HOM05D006688 ORTHO05D008550 1.8e-127 459.9 370 61.1
MELO3C015492.2 Cucumis melo HOM05D006688 ORTHO05D008550 1.2e-126 457.2 368 59.8
FAN28G0979 Fragaria x ananassa HOM05D006688 ORTHO05D008550 1.2e-126 457.2 370 61.1
ECA232G4161 Erigeron canadensis HOM05D006688 ORTHO05D008550 4.4e-126 455.3 368 59.0
CsaV3_1G040620 Cucumis sativus L. HOM05D006688 ORTHO05D008550 5.8e-126 454.9 368 59.5
FAN19G1103 Fragaria x ananassa HOM05D006688 ORTHO05D008550 7.5e-126 454.5 366 62.0
EL10Ac8g19177 Beta vulgaris HOM05D006688 ORTHO05D008550 2.2e-125 453.0 374 59.4
DCAR_010507 Daucus carota HOM05D006688 ORTHO05D008550 4.9e-125 451.8 368 58.2
arahy.Tifrunner.gnm1.ann1.UP5FVB Arachis hypogaea HOM05D006688 ORTHO05D008550 8.3e-125 451.1 366 59.6
Sc08g0008600 Simmondsia chinensis HOM05D006688 ORTHO05D008550 1.1e-124 450.7 368 59.0
Sed0022183 Sechium edule HOM05D006688 ORTHO05D008550 1.6e-123 446.8 366 57.9
arahy.Tifrunner.gnm1.ann1.XSA7KG Arachis hypogaea HOM05D006688 ORTHO05D008550 2.1e-123 446.4 370 58.9
Duzib150G1545 Durio zibethinus HOM05D006688 ORTHO05D000625 6.0e-123 444.9 340 63.5
Thhalv10022744m.g Eutrema salsugineum HOM05D006688 ORTHO05D008550 6.0e-123 444.9 370 58.4
BcaC06g36575 Brassica carinata HOM05D006688 ORTHO05D008550 1.0e-122 444.1 368 58.2
C07p02720 Brassica napus HOM05D006688 ORTHO05D008550 3.0e-122 442.6 368 57.9
BolC7t40672H Brassica oleracea HOM05D006688 ORTHO05D008550 3.9e-122 442.2 368 57.9
Potri.007G001500 Populus trichocarpa HOM05D006688 ORTHO05D008550 8.6e-122 441.0 366 58.5
AL3G48850 Arabidopsis lyrata HOM05D006688 ORTHO05D008550 3.3e-121 439.1 370 58.6
BcaB03g16729 Brassica carinata HOM05D006688 ORTHO05D008550 3.3e-121 439.1 368 57.9
BraA07t27924Z Brassica rapa HOM05D006688 ORTHO05D008550 7.3e-121 438.0 363 57.9
Glyma.13G106300 Glycine max HOM05D006688 ORTHO05D008550 7.3e-121 438.0 372 57.3
CARHR109870 Cardamine hirsuta HOM05D006688 ORTHO05D008550 9.5e-121 437.6 368 58.4
Carub.0003s3371 Capsella rubella HOM05D006688 ORTHO05D008550 1.6e-120 436.8 365 58.4
AT2G19430 Arabidopsis thaliana HOM05D006688 ORTHO05D008550 2.8e-120 436.0 370 58.4
Lj4g0022709 Lotus japonicus HOM05D006688 ORTHO05D008550 2.8e-120 436.0 367 58.3
Glyma.17G053100 Glycine max HOM05D006688 ORTHO05D008550 3.6e-120 435.6 372 56.7
Aa31LG8G16440 Aethionema arabicum HOM05D006688 ORTHO05D008550 6.2e-120 434.9 364 58.8
arahy.Tifrunner.gnm1.ann1.LNAK8N Arachis hypogaea HOM05D006688 ORTHO05D008550 6.2e-120 434.9 358 59.5
AUR62029033 Chenopodium quinoa HOM05D006688 ORTHO05D008550 1.8e-119 433.3 373 57.9
Hund06662 Selenicereus undatus HOM05D006688 ORTHO05D008550 4.0e-119 432.2 370 57.3
A07p01330 Brassica napus HOM05D006688 ORTHO05D008550 8.9e-119 431.0 363 57.9
Ah.09g228060 Amaranthus hybridus HOM05D006688 ORTHO05D008550 2.0e-118 429.9 378 55.8
Cfa003056 Carpinus fangiana HOM05D006688 ORTHO05D000625 3.4e-118 429.1 342 59.6
MBI04_g35655_MAGBIO Magnolia biondii HOM05D006688 ORTHO05D008550 4.4e-118 428.7 378 58.5
TPR.G9451 Trifolium pratense HOM05D006688 ORTHO05D008550 1.3e-117 427.2 379 56.2
VMungo1215G1360 Vigna mungo HOM05D006688 ORTHO05D008550 2.2e-117 426.4 371 56.9
Phvul.003G134700 Phaseolus vulgaris HOM05D006688 ORTHO05D008550 6.4e-117 424.9 371 56.6
Eucgr.C03417 Eucalyptus grandis HOM05D006688 ORTHO05D008550 1.1e-116 424.1 365 56.4
Medtr4g125950 Medicago truncatula HOM05D006688 ORTHO05D008550 2.4e-116 422.9 372 55.9
Sabra07G0001100 Salix brachista HOM05D006688 ORTHO05D008550 2.7e-115 419.5 407 53.3
Lalb_Chr20g0118781 Lupinus albus HOM05D006688 ORTHO05D008550 6.0e-115 418.3 366 56.0
Lsat_1_v5_gn_5_143161 Lactuca sativa HOM05D006688 ORTHO05D008550 1.1e-113 414.1 369 55.0
ClCG03G015420 Citrullus lanatus HOM05D006688 ORTHO05D008550 1.1e-111 407.5 349 57.3
Sp3g32810 Schrenkiella parvula HOM05D006688 ORTHO05D008550 1.4e-111 407.1 370 54.9
THA.LOC104814631 Tarenaya hassleriana HOM05D006688 ORTHO05D008550 1.7e-109 400.2 367 53.4
MBI04_g12191_MAGBIO Magnolia biondii HOM05D006688 ORTHO05D008550 6.4e-109 398.3 351 58.1
Prupe.7G205900 Prunus persica HOM05D006688 ORTHO05D008550 6.4e-109 398.3 292 64.0
Nn8g38791 Nelumbo nucifera HOM05D006688 ORTHO05D008550 1.2e-107 394.0 382 53.1
Ca_21292_v3 Cicer arietinum L. HOM05D006688 ORTHO05D008550 1.3e-106 390.6 371 52.6
TWI32G0460 Tripterygium wilfordii HOM05D006688 ORTHO05D008550 1.7e-106 390.2 379 53.3
FAN26G2887 Fragaria x ananassa HOM05D006688 ORTHO05D008550 1.3e-104 384.0 291 63.9
FAN23G3127 Fragaria x ananassa HOM05D006688 ORTHO05D008550 5.3e-103 378.6 370 54.6
AUR62033933 Chenopodium quinoa HOM05D006688 ORTHO05D008550 1.3e-101 374.0 394 50.0
HanXRQChr10g0319491 Helianthus annuus HOM05D006688 ORTHO05D008550 1.3e-101 374.0 373 52.8
Actinidia38457 Actinidia chinensis HOM05D006688 ORTHO05D008550 7.4e-97 358.2 363 51.8
CDE04G2495 Ceratophyllum demersum HOM05D006688 ORTHO05D008550 2.1e-96 356.7 344 52.3
HPP92_007651 Vanilla planifolia HOM05D006688 ORTHO05D008550 4.0e-95 352.4 454 42.5
Zm00001eb310980 Zea mays HOM05D006688 ORTHO05D008550 5.8e-94 348.6 370 46.8
MD15G1210900 Malus domestica HOM05D006688 ORTHO05D008550 2.2e-93 346.7 387 48.3
ATR0789G107 Amborella trichopoda HOM05D006688 ORTHO05D008550 6.0e-91 338.6 353 50.1
Psat7g043880 Pisum sativum HOM05D006688 ORTHO05D008550 4.8e-88 328.9 311 53.1
Mapoly0100s0025 Marchantia polymorpha HOM05D006688 ORTHO05D008550 6.5e-77 292.0 375 44.0
Ciclev10009613m.g Citrus clementina HOM05D006688 ORTHO05D008550 2.0e-70 270.4 188 68.1
CANSAT56G4018 Cannabis sativa HOM05D006688 ORTHO05D008550 3.5e-62 243.0 215 55.8
Lj7A540G53 Lonicera japonica HOM05D006688 ORTHO05D008550 8.8e-50 201.8 173 57.2
Os09g0363600 Oryza sativa ssp. japonica HOM05D006688 ORTHO05D008550 5.7e-49 199.1 269 40.9
MCO14G146 Micromonas commoda HOM05D006688 ORTHO05D008550 1.9e-44 184.1 369 33.6
Cpa.g.sc28.145 Carica papaya HOM05D006688 ORTHO05D008550 1.4e-39 167.9 127 63.0
Ciclev10009794m.g Citrus clementina HOM05D006688 ORTHO05D008550 2.1e-35 154.1 149 53.0
Cpa.g.sc28.142 Carica papaya HOM05D006688 ORTHO05D008550 1.0e-34 151.8 153 51.6
Solyc07g040780.4 Solanum lycopersicum HOM05D006688 ORTHO05D008550 2.3e-29 134.0 141 49.6
Cre03.g180200 Chlamydomonas reinhardtii HOM05D006688 ORTHO05D008550 9.8e-25 118.6 421 25.2
SEGI_08677 Sequoiadendron giganteum HOM05D006688 ORTHO05D008550 2.2e-24 117.5 127 48.0
Duzib168G0254 Durio zibethinus HOM05D006688 ORTHO05D008550 1.7e-21 107.8 65 76.9
arahy.Tifrunner.gnm1.ann1.B17F7K Arachis hypogaea HOM05D006688 ORTHO05D008550 1.7e-16 91.3 68 60.3
arahy.Tifrunner.gnm1.ann1.LK4K8I Arachis hypogaea HOM05D006688 ORTHO05D008550 1.7e-16 91.3 80 53.8
Thhalv10023917m.g Eutrema salsugineum HOM05D006688 ORTHO05D008550 6.4e-16 89.4 123 42.3
SEGI_12408 Sequoiadendron giganteum HOM05D006688 ORTHO05D008550 5.4e-15 86.3 95 43.2
PRCOL_00004704 Prasinoderma coloniale HOM05D006688 ORTHO05D008550 3.5e-14 83.6 291 23.7
BcaB06g28627 Brassica carinata HOM05D000836 ORTHO05D000709 2.2e-08 64.3 210 24.3
COL.COLO4_27080 Corchorus olitorius HOM05D006688 ORTHO05D008550 1.1e-07 62.0 68 48.5
A04p25240 Brassica napus HOM05D000836 ORTHO05D000709 2.4e-07 60.8 226 23.0
CBR_g13009 Chara braunii HOM05D006688 ORTHO05D008550 5.4e-07 59.7 49 53.1
BcaB07g31609 Brassica carinata HOM05D006688 ORTHO05D008550 1.2e-06 58.5 115 33.9
BraA04t18027Z Brassica rapa HOM05D000836 ORTHO05D000709 2.7e-06 57.4 134 29.1
BolC3t12720H Brassica oleracea HOM05D023048 ORTHO05D024144 4.6e-06 56.6 49 51.0
DCAR_000644 Daucus carota HOM05D003913 ORTHO05D004803 4.6e-06 56.6 161 28.6
TAR374G1586 Trochodendron aralioides HOM05D004386 ORTHO05D005247 4.6e-06 56.6 104 30.8
CBR_g11128 Chara braunii HOM05D005544 ORTHO05D007303 6.0e-06 56.2 126 27.8
Thhalv10001392m.g Eutrema salsugineum HOM05D005544 ORTHO05D007303 6.0e-06 56.2 185 26.5


User provided reference genes

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