Gene: SGA_v2.0_scaffold23G10037

General Information

Structural Information

  • Species Striga asiatica
  • Gene Identifier SGA_v2.0_scaffold23G10037
  • Transcript Identifier SGA_v2.0_scaffold23T10037
  • Gene Type Coding gene
  • Location scaffold23 : 473621-483221 : negative

Gene Family Information

  • ID HOM05D006688
  • #Genes/#Species 120/94
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

Descriptions

  • product WD40 repeat containing protein
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006334
IEA
InterPronucleosome assembly
GO:0031047
ISO
PLAZA Integrative Orthologygene silencing by RNA AT2G19430
GO:0009788
ISO
PLAZA Integrative Orthologynegative regulation of abscisic acid-activated signaling pathway AT2G19430
GO:0016567
ISO
PLAZA Integrative Orthologyprotein ubiquitination AT2G19430
GO:0010267
ISO
PLAZA Integrative Orthologyproduction of ta-siRNAs involved in RNA interference AT2G19430

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005515
IEA
InterProprotein binding
GO:0003677
IEA
InterProDNA binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0000786
IEA
InterPronucleosome
GO:0005634
ISO
PLAZA Integrative Orthologynucleus AT2G19430
GO:0000347
ISO
PLAZA Integrative OrthologyTHO complex AT2G19430
GO:0080008
ISO
PLAZA Integrative OrthologyCul4-RING E3 ubiquitin ligase complex AT2G19430

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR001680 WD40 repeat
IPR042626 THO complex subunit 6
IPR005818 Linker histone H1/H5, domain H15
IPR015943 WD40/YVTN repeat-like-containing domain superfamily
IPR009057 Homeobox-like domain superfamily
IPR001005 SANT/Myb domain
IPR036322 WD40-repeat-containing domain superfamily
IPR036388 Winged helix-like DNA-binding domain superfamily
IPR017930 Myb domain
IPR036390 Winged helix DNA-binding domain superfamily
Mapman id Description
16.10.1.1.5 RNA processing.messenger ribonucleoparticle (mRNP) export.TREX/THO mRNP trafficking complex.THO subcomplex.component THOC6